>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA
           sequence
          Length = 654

 Score =  174 bits (88), Expect = 5e-41
 Identities = 128/142 (90%)
 Strand = Plus / Minus

                                                                       
Query: 13  aacattnttactagatcaatgtggttcctacaagctggaccctcgtataaccgccgaaaa 72
           |||||| ||||||||||||||||||||||||||  ||||||||||||||| | | |||||
Sbjct: 543 aacatttttactagatcaatgtggttcctacaacttggaccctcgtataatcacggaaaa 484

                                                                       
Query: 73  catacagggcatgacggggcgacttatgcgacaaacagctncgcctgcccgtcgatgaag 132
           |||||| |||| |||  | ||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 483 catacaaggcacgacaagtcgacttatgcgacgaacagctctgcctgcccgtcgatgaag 424

                                 
Query: 133 aggctcatgaactcctccccgt 154
           ||||||||||||||||||||||
Sbjct: 423 aggctcatgaactcctccccgt 402

>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score =  147 bits (74), Expect = 1e-32
 Identities = 135/155 (87%), Gaps = 7/155 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtttgcaaaaacaacattnttactagatcaatgtggttcctacaagctggaccctcgtat 60
           |||||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 788 gtttgcgaaaagaacatttttactagatcaatgtggttcctacaagttggaccctcgtgt 729

                                                                       
Query: 61  aaccgccgaaaa-catacagggcatgacggggcgacttatgcgacaaacagctncgcctg 119
           || | ||||||| ||||||||      || |  |||||||||||| |||||||  |||||
Sbjct: 728 aatcaccgaaaaacatacagg------cgagttgacttatgcgacgaacagctctgcctg 675

                                              
Query: 120 cccgtcgatgaagaggctcatgaactcctccccgt 154
           |||||||||||||||||||||||||||||||||||
Sbjct: 674 cccgtcgatgaagaggctcatgaactcctccccgt 640

>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence
          Length = 1556

 Score =  145 bits (73), Expect = 4e-32
 Identities = 140/160 (87%), Gaps = 6/160 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtttgcaaaaacaacattntt-actagatcaatgtggttcctacaagctggaccctcgta 59
            |||||| |||| |||||| || ||||||||||||||||||||||||| ||||||||||||
Sbjct: 1463 gtttgcgaaaagaacattttttactagatcaatgtggttcctacaagttggaccctcgta 1404

                                                                        
Query: 60   taaccgccgaaaa-catacagggcatg----acggggcgacttatgcgacaaacagctnc 114
            ||| | || |||| ||||||||||| |    ||  | ||||||||||||| |||||||  
Sbjct: 1403 taatcaccaaaaaacatacagggcacgcacgacaagtcgacttatgcgacgaacagctct 1344

                                                    
Query: 115  gcctgcccgtcgatgaagaggctcatgaactcctccccgt 154
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 gcctgcccgtcgatgaagaggctcatgaactcctccccgt 1304

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 100      gcgacaaacagctncgcctgcccgtcgatgaagaggctcatgaactcctccccgt 154
                |||||||||| ||  ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgt 30354782

>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                     
Query: 100    gcgacaaacagctncgcctgcccgtcgatgaagaggctcatgaactcctccccgt 154
              |||||||||| ||  ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgt 101377

>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 100  gcgacaaacagctncgcctgcccgtcgatgaagaggctcatgaactcctccccgt 154
            |||||||||| ||  ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgt 2039

>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
            insert sequence
          Length = 1325

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 100  gcgacaaacagctncgcctgcccgtcgatgaagaggctcatgaactcctccccgt 154
            |||||||||| ||  ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgt 1095

>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 100  gcgacaaacagctncgcctgcccgtcgatgaagaggctcatgaactcctccccgt 154
            |||||||||||||  ||||| ||||| ||||| | ||||||||||||||||||||
Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgt 1391



 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   atgtggttcctacaagctgg 50
            ||||||||||||||||||||
Sbjct: 1545 atgtggttcctacaagctgg 1526

>gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence
          Length = 202

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 atgtggttcctacaagctgg 50
          ||||||||||||||||||||
Sbjct: 62 atgtggttcctacaagctgg 81

>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160
           of 256 of the complete sequence
          Length = 13735

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 116 cctgcccgtcgatgaagagg 135
           ||||||||||||||||||||
Sbjct: 470 cctgcccgtcgatgaagagg 489

>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete
             sequence
          Length = 213673

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   gaagaggctcatgaactcct 148
             ||||||||||||||||||||
Sbjct: 81922 gaagaggctcatgaactcct 81903

>gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 125 cgatgaagaggctcatgaactcctcccc 152
           |||||||||||||||| ||||| |||||
Sbjct: 656 cgatgaagaggctcataaactcttcccc 683

>ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11765-RA (Prx2540-2),
           mRNA
          Length = 868

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 125 cgatgaagaggctcatgaactcctcccc 152
           |||||||||||||||| ||||| |||||
Sbjct: 657 cgatgaagaggctcataaactcttcccc 684

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     cctgcccgtcgatgaagagg 135
               ||||||||||||||||||||
Sbjct: 1766640 cctgcccgtcgatgaagagg 1766659

>gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 125 cgatgaagaggctcatgaactcctcccc 152
           |||||||||||||||| ||||| |||||
Sbjct: 655 cgatgaagaggctcataaactcttcccc 682

>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
             BACR20O22, complete sequence
          Length = 168567

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 125   cgatgaagaggctcatgaactcctcccc 152
             |||||||||||||||| ||||| |||||
Sbjct: 77043 cgatgaagaggctcataaactcttcccc 77070

>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
             sequence
          Length = 281782

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 125   cgatgaagaggctcatgaactcctcccc 152
             |||||||||||||||| ||||| |||||
Sbjct: 55947 cgatgaagaggctcataaactcttcccc 55974

>gb|AC121143.12| Mus musculus chromosome 1, clone RP24-177B16, complete sequence
          Length = 176008

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    gaaaacatacagggcatga 86
             |||||||||||||||||||
Sbjct: 51273 gaaaacatacagggcatga 51255

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 65      gccgaaaacatacagggca 83
               |||||||||||||||||||
Sbjct: 2504461 gccgaaaacatacagggca 2504479

>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete
            cds
          Length = 590284

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 68   gaaaacatacagggcatga 86
            |||||||||||||||||||
Sbjct: 7681 gaaaacatacagggcatga 7663

>gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase (sorE),
             beta-hydroxybutyryl-CoA dehydrogenase (sorD), putative
             methoxymalonyl-CoA synthase (sorC), reductase (sorR),
             soraphen polyketide synthase A (sorA), soraphen polyketide
             synthase B (sorB), O-methyltransferase (sorM),
             beta-mannanase, and xylanse-arabinofuranosidase
             bifunctional enzyme genes, complete cds; and unknown genes
          Length = 67523

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 119   gcccgtcgatgaagaggctcatg 141
             ||||||||||| |||||||||||
Sbjct: 66243 gcccgtcgatgtagaggctcatg 66221

>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence
          Length = 163926

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 68     gaaaacatacagggcatga 86
              |||||||||||||||||||
Sbjct: 113941 gaaaacatacagggcatga 113959

>emb|BX784393.3| Zebrafish DNA sequence from clone DKEY-126N3 in linkage group 1,
             complete sequence
          Length = 117152

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    actagatcaatgtggttcc 40
             |||||||||||||||||||
Sbjct: 97962 actagatcaatgtggttcc 97944

>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 124  tcgatgaagaggctcatgaactc 146
            |||||||| ||||||||||||||
Sbjct: 2117 tcgatgaaaaggctcatgaactc 2095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 836,991
Number of Sequences: 3902068
Number of extensions: 836991
Number of successful extensions: 51185
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51101
Number of HSP's gapped (non-prelim): 83
length of query: 156
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 134
effective length of database: 17,147,199,772
effective search space: 2297724769448
effective search space used: 2297724769448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)