ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62k07 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 238 bits (607), Expect = 7e-63 Identities = 116/126 (92%), Positives = 121/126 (96%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD Sbjct: 207 ERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 266 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL KENVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+ Sbjct: 267 EEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGI 326 Query: 142 WYAQLE 125 WYAQLE Sbjct: 327 WYAQLE 332
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 237 bits (604), Expect = 2e-62 Identities = 115/126 (91%), Positives = 121/126 (96%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFTVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRGD Sbjct: 204 ERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGD 263 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL KEN+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+ Sbjct: 264 EEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGI 323 Query: 142 WYAQLE 125 WYAQLE Sbjct: 324 WYAQLE 329
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 234 bits (598), Expect = 8e-62 Identities = 114/126 (90%), Positives = 120/126 (95%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD Sbjct: 204 ERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 263 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL KENVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+ Sbjct: 264 EEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGI 323 Query: 142 WYAQLE 125 WYAQLE Sbjct: 324 WYAQLE 329
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 231 bits (588), Expect = 1e-60 Identities = 113/127 (88%), Positives = 121/127 (95%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFT+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVALPAGGRGD Sbjct: 203 ERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGD 262 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL KEN K+A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGV Sbjct: 263 EEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGV 322 Query: 142 WYAQLES 122 WYAQLES Sbjct: 323 WYAQLES 329
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 229 bits (585), Expect = 2e-60 Identities = 111/126 (88%), Positives = 118/126 (93%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFTVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD Sbjct: 206 ERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 265 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL+KENVKN ++S G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGV Sbjct: 266 EEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGV 325 Query: 142 WYAQLE 125 WY Q+E Sbjct: 326 WYGQIE 331
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 229 bits (585), Expect = 2e-60 Identities = 120/128 (93%), Positives = 121/128 (94%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERV FLFTVKQLVATGKPESF PFLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGD Sbjct: 201 ERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGD 259 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL +APKDVKIQGV Sbjct: 260 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGV 317 Query: 142 WYAQLESN 119 WYAQLESN Sbjct: 318 WYAQLESN 325
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 229 bits (583), Expect = 4e-60 Identities = 112/126 (88%), Positives = 118/126 (93%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD Sbjct: 205 ERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 264 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GV Sbjct: 265 EEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGV 324 Query: 142 WYAQLE 125 WYAQLE Sbjct: 325 WYAQLE 330
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 228 bits (582), Expect = 5e-60 Identities = 111/127 (87%), Positives = 118/127 (92%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFT+KQLVA+GKPESFS FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD Sbjct: 207 ERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 266 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL KENVKN +S TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+ Sbjct: 267 EEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGI 326 Query: 142 WYAQLES 122 WYAQLES Sbjct: 327 WYAQLES 333
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 228 bits (580), Expect = 9e-60 Identities = 111/126 (88%), Positives = 117/126 (92%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFTVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD Sbjct: 207 ERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 266 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEEL KENVKN ++S G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGV Sbjct: 267 EEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGV 326 Query: 142 WYAQLE 125 WY QLE Sbjct: 327 WYGQLE 332
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 170 bits (430), Expect = 2e-42 Identities = 85/126 (67%), Positives = 95/126 (75%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERV FLFT+KQ G + G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPA R D Sbjct: 168 ERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RAD 225 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEL KENVK + G+ SV K P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+ Sbjct: 226 AEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGL 285 Query: 142 WYAQLE 125 WYAQL+ Sbjct: 286 WYAQLK 291
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 169 bits (428), Expect = 4e-42 Identities = 82/125 (65%), Positives = 96/125 (76%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERVPFLFT+K L+A G F G F VPSYRG++FLDPKGRGG++GYD AVALPA G D Sbjct: 212 ERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPASG--D 269 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 +EE AKEN K+ ++S G I V K ETGE+ GVFES+QPSDTDLGAK PKD+K GV Sbjct: 270 DEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGV 329 Query: 142 WYAQL 128 WYAQ+ Sbjct: 330 WYAQI 334
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 167 bits (422), Expect = 2e-41 Identities = 83/125 (66%), Positives = 94/125 (75%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 323 ERV FLFT+KQ G ++ G F+VPSYRGSSFLDPKGRGGSTGYDNAVALPA R D Sbjct: 169 ERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RAD 226 Query: 322 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 143 EEL KENVK+ + G+ SV K TGE+ GVFES+QPSDTDLGAK PKD+KI G+ Sbjct: 227 AEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGL 286 Query: 142 WYAQL 128 WY QL Sbjct: 287 WYGQL 291
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 145 bits (366), Expect = 6e-35 Identities = 75/134 (55%), Positives = 94/134 (70%), Gaps = 8/134 (5%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVA 347 ERVPFLFT+K LVA +P F G F VPSYRG++FLDPKGRG +GYDNAVA Sbjct: 142 ERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVA 201 Query: 346 LPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAP 167 LPA + D+E+L + NVK A G I+L + K +GE+ G FES QPSDTDLGA P Sbjct: 202 LPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGADEP 259 Query: 166 KDVKIQGVWYAQLE 125 K+VKI+G++YA++E Sbjct: 260 KEVKIRGIFYARVE 273
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 136 bits (342), Expect = 4e-32 Identities = 74/133 (55%), Positives = 92/133 (69%), Gaps = 8/133 (6%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVA 347 E+VPF FT+K LV +P F G F VPSYRG++FLDPKGRG +TGYDNAVA Sbjct: 143 EQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLATGYDNAVA 202 Query: 346 LPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAP 167 LPA D+E+ A NVK G+I+L VTK TGE+ GVF+S QPSDTDLGAK P Sbjct: 203 LPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQPSDTDLGAKEP 258 Query: 166 KDVKIQGVWYAQL 128 +VKI+G++YA++ Sbjct: 259 VEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 133 bits (334), Expect = 3e-31 Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 8/134 (5%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVA 347 ER+P LFTVK LVA+ +P F G F VPSYR ++FLDPKGRG ++GYD+A+A Sbjct: 140 ERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIA 199 Query: 346 LPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAP 167 LP + EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD D+GA P Sbjct: 200 LP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEP 256 Query: 166 KDVKIQGVWYAQLE 125 +VKIQGV+YA +E Sbjct: 257 HEVKIQGVFYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 133 bits (334), Expect = 3e-31 Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 8/134 (5%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVA 347 ER+P LFTVK LVA+ +P F G F VPSYR ++FLDPKGRG ++GYD+A+A Sbjct: 140 ERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIA 199 Query: 346 LPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAP 167 LP + EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD D+GA P Sbjct: 200 LP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEP 256 Query: 166 KDVKIQGVWYAQLE 125 +VKIQGV+YA +E Sbjct: 257 HEVKIQGVFYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 126 bits (317), Expect = 3e-29 Identities = 70/134 (52%), Positives = 91/134 (67%), Gaps = 8/134 (5%) Frame = -2 Query: 502 ERVPFLFTVKQLVA-TGKPES-------FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVA 347 E VPFLFTVK LVA T +P + G + VPSYR S+FLDPK RG +TGY++AVA Sbjct: 142 EEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAVA 201 Query: 346 LPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAP 167 +P+ G D E+L KENVK + G I+L+V+K TGEV GVF ++QPSDTD+G K Sbjct: 202 IPSAG--DAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGGKEA 259 Query: 166 KDVKIQGVWYAQLE 125 DVK+ G +Y ++E Sbjct: 260 VDVKLVGQFYGRIE 273
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 124 bits (310), Expect = 2e-28 Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 8/136 (5%) Frame = -2 Query: 502 ERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVA 347 E VPF FTVK T +P F G F VPSYRG+ FLDPK RG TGYDNAVA Sbjct: 143 EEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVA 202 Query: 346 LPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAP 167 LP+ + + N K G ++L VT+ TGE+ G+FES QPSDTDLGAK P Sbjct: 203 LPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKEP 257 Query: 166 KDVKIQGVWYAQLESN 119 DVK++G++Y +++++ Sbjct: 258 LDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 388 KGRGGSTGYDNAVALPAGGR 329 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.20 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = -2 Query: 313 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 152 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 1.7 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -2 Query: 352 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 176 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 175 KAP 167 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 334 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 200 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 30.4 bits (67), Expect = 2.8 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 430 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 266 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 265 TLSVTKSKP 239 T + + P Sbjct: 489 TGHLEEPMP 497
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 30.4 bits (67), Expect = 2.8 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = -2 Query: 430 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 266 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 265 TLSVTKSKP 239 T + + P Sbjct: 489 TGHLEEPMP 497
>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) (Fragment) Length = 319 Score = 30.0 bits (66), Expect = 3.7 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -2 Query: 484 FTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYD 359 F + + A PES +G +VP Y+ S++ +G G TGY+ Sbjct: 5 FATRAIHAGQDPESVTGAVIVPIYQTSTYAQ-RGVGDHTGYE 45
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 3.7 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 202 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 71 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 4.8 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +3 Query: 78 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 257 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 258 LRV---MLPVEEDAFFTF 302 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 6.3 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = -2 Query: 412 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 233 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 232 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 146 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 6.3 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 202 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 77 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 6.3 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = +3 Query: 18 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 197 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 198 GCTLSKTPITSPVSGLL 248 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.9 bits (63), Expect = 8.2 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = -2 Query: 463 ATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNAS 284 A+G PES GP + G S P G G + V G +E + + NAS Sbjct: 845 ASGGPES-GGPEHISQDNGISSSGPTGAAGMHAVTSVVTTGPDGTSMDEVSQQSTLSNAS 903 Query: 283 SSTG 272 +++G Sbjct: 904 AASG 907
>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 330 Score = 28.9 bits (63), Expect = 8.2 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = -2 Query: 265 TLSVTKSKPETGEVIGVFESVQPSD 191 +LSV+K+K E EV+GV E VQ SD Sbjct: 52 SLSVSKAKKEGFEVLGVKELVQQSD 76
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 28.9 bits (63), Expect = 8.2 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Frame = -2 Query: 409 GSSFLDPKGRGG---STGYDNAVALPAGG----RGDEEELAKENVKNASSSTGN 269 G ++ G GG STG N+ + PAGG G ++ ++ + + SSS+GN Sbjct: 170 GGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGN 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,555,602 Number of Sequences: 219361 Number of extensions: 1053146 Number of successful extensions: 4263 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4243 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
