Clone Name | rbah62k02 |
---|---|
Clone Library Name | barley_pub |
>gb|AC098683.18| Mus musculus strain 129/Sv clone ct7-128f23 map 5, complete sequence Length = 112727 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 ttactgcaatacatgtccttga 154 |||||||||||||||||||||| Sbjct: 11288 ttactgcaatacatgtccttga 11309
>gb|AC115293.5| Mus musculus BAC clone RP23-92N2 from chromosome 5, complete sequence Length = 239951 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 ttactgcaatacatgtccttga 154 |||||||||||||||||||||| Sbjct: 64127 ttactgcaatacatgtccttga 64106
>gb|AC098684.13| Mus musculus strain 129/Sv clone ct7-391l15 map 5, complete sequence Length = 150686 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 ttactgcaatacatgtccttga 154 |||||||||||||||||||||| Sbjct: 104516 ttactgcaatacatgtccttga 104537
>gb|AC156029.2| Mus musculus BAC clone RP23-42O8 from chromosome 5, complete sequence Length = 235471 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 133 ttactgcaatacatgtccttga 154 |||||||||||||||||||||| Sbjct: 85018 ttactgcaatacatgtccttga 85039
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 acagcaatgataactctaag 205 |||||||||||||||||||| Sbjct: 139983 acagcaatgataactctaag 139964
>gb|AY022228.1| Oryza sativa microsatellite MRG4553 containing (TG)X15, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 caacaaacaaatattccaag 34 |||||||||||||||||||| Sbjct: 158 caacaaacaaatattccaag 139
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 acagcaatgataactctaag 205 |||||||||||||||||||| Sbjct: 15177 acagcaatgataactctaag 15158
>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence Length = 167913 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 acagcaatgataactctaag 205 |||||||||||||||||||| Sbjct: 54857 acagcaatgataactctaag 54876
>emb|AL365508.19| Human DNA sequence from clone RP11-301B7 on chromosome 6 Contains part of the gene for a novel protein highly similar to FLJ30899, complete sequence Length = 96315 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ccaacaaacaaatattccaa 33 |||||||||||||||||||| Sbjct: 41868 ccaacaaacaaatattccaa 41849
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 caacaaacaaatattccaag 34 |||||||||||||||||||| Sbjct: 4666969 caacaaacaaatattccaag 4666988
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 caacaaacaaatattccaag 34 |||||||||||||||||||| Sbjct: 39041 caacaaacaaatattccaag 39060 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,630,034 Number of Sequences: 3902068 Number of extensions: 1630034 Number of successful extensions: 111883 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111831 Number of HSP's gapped (non-prelim): 52 length of query: 208 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 186 effective length of database: 17,147,199,772 effective search space: 3189379157592 effective search space used: 3189379157592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)