Clone Name | rbah62j20 |
---|---|
Clone Library Name | barley_pub |
>gb|AY039003.1| Hordeum vulgare subsp. vulgare Mg-chelatase subunit XANTHA-F (Xantha-f) gene, complete cds Length = 6252 Score = 926 bits (467), Expect = 0.0 Identities = 486/492 (98%), Gaps = 1/492 (0%) Strand = Plus / Minus Query: 1 ctgttactatatgctgtcaatgaacatgtgacagcaaagtaccaatattccccaaaaaag 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6159 ctgttactatat-ctgtcaatgaacatgtgacagcaaagtaccaatattccccaaaaaag 6101 Query: 61 aacttctactcatgcttcctttttacattcacaacgaaccaccctctttgttaaaggtct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6100 aacttctactcatgcttcctttttacattcacaacgaaccaccctctttgttaaaggtct 6041 Query: 121 gtattgcatgttacaacttatataaattacaaattatacaagtttcaactcancaaggca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 6040 gtattgcatgttacaacttatataaattacaaattatacaagtttcaactcaacgaggca 5981 Query: 181 gaagaattccttcttggtcaagtgctggaactggttgatcagtgaaatgagttcaccggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5980 gaagaattccttcttggtcaagtgctggaactggttgatcagtgaaatgagttcaccggt 5921 Query: 241 caattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5920 caattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagttat 5861 Query: 301 cctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcancttcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5860 cctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttcc 5801 Query: 361 tgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5800 tgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatg 5741 Query: 421 tggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactccatccaa 480 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5740 tggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatccaa 5681 Query: 481 cagtatttgtca 492 |||||||||||| Sbjct: 5680 cagtatttgtca 5669
>gb|U26916.1|HVU26916 Hordeum vulgare protoporphyrin IX Mg-chelatase subunit precursor (Xantha-f) gene, complete cds Length = 6364 Score = 896 bits (452), Expect = 0.0 Identities = 484/493 (98%), Gaps = 2/493 (0%) Strand = Plus / Minus Query: 1 ctgttactatatgctgtcaatgaacatgtgacagc-aaagtaccaatattccccaaaaaa 59 |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 6174 ctgttactatat-ctgtcaatgaacatgtgacagccaaagtaccaatattccccccaaaa 6116 Query: 60 gaacttctactcatgcttcctttttacattcacaacgaaccaccctctttgttaaaggtc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6115 gaacttctactcatgcttcctttttacattcacaacgaaccaccctctttgttaaaggtc 6056 Query: 120 tgtattgcatgttacaacttatataaattacaaattatacaagtttcaactcancaaggc 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 6055 tgtattgcatgttacaacttatataaattacaaattatacaagtttcaactcaacgaggc 5996 Query: 180 agaagaattccttcttggtcaagtgctggaactggttgatcagtgaaatgagttcaccgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5995 agaagaattccttcttggtcaagtgctggaactggttgatcagtgaaatgagttcaccgg 5936 Query: 240 tcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagtta 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5935 tcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagtta 5876 Query: 300 tcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcancttc 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5875 tcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcagcttc 5816 Query: 360 ctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaat 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5815 ctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaat 5756 Query: 420 gtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactccatcca 479 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5755 gtggtatttgcttcctcgtaaacccagttgtccacctgcccggatgttgcactccatcca 5696 Query: 480 acagtatttgtca 492 ||||||||||||| Sbjct: 5695 acagtatttgtca 5683
>gb|BT009033.1| Triticum aestivum clone wdk4c.pk005.f24:fis, full insert mRNA sequence Length = 3257 Score = 688 bits (347), Expect = 0.0 Identities = 398/415 (95%), Gaps = 2/415 (0%) Strand = Plus / Minus Query: 80 tttttacattcacaacgaaccaccctctttgttaaaggtctgtattgcatgttacaactt 139 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3253 tttttacattcacaacgaaccaccctctttgttaaaggtctgtatggcatgttacaactt 3194 Query: 140 atataaattacaaattatacaagtttcaactcancaaggcagaagaat--tccttcttgg 197 ||||||| |||||||||||||||||| ||||| |||||||||||||| | |||||||| Sbjct: 3193 ttataaatcacaaattatacaagtttcgactcagcaaggcagaagaatatttcttcttgg 3134 Query: 198 tcaagtgctggaactggttgatcagtgaaatgagttcaccggtcaattccttcgatcttg 257 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 tcaaatgctggaactggttgatcagtgaaatgagttcaccggtcaattccttcgatcttg 3074 Query: 258 tcttcaacctccgagtagagctccctgagcctttccaagttatcctctgatgtctcccag 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3073 tcttcaacctccgagtagagctccctgagcctttccaagttatcctctgatgtctcccag 3014 Query: 318 tagcctctgccatttgcttctaggaaggtttgaagcancttcctgaacgaattgggatta 377 ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 3013 tagcccctgccatttgcttctaggaaggtttgaagcagtttcctgaacgaattggggttg 2954 Query: 378 gtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggtatttgcttcctca 437 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2953 gtgtccatcagcctcttcctcatctcttcatcttcaatgaatgtggtatttgcttcctcg 2894 Query: 438 taaacccagntgtccacctgcccggatgttgcactccatccaacagtatttgtca 492 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2893 taaacccagttgtccacctgcccggatgttgcactccatccaacagtatttgtca 2839
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 11691872 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 11691813 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 11691812 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 11691753 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 11691752 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 11691693 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 11691692 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 11691633 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 11691632 atccaacagtatttgtca 11691615
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 80967 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 80908 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 80907 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 80848 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 80847 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 80788 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 80787 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 80728 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 80727 atccaacagtatttgtca 80710
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 11688635 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 11688576 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 11688575 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 11688516 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 11688515 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 11688456 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 11688455 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 11688396 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 11688395 atccaacagtatttgtca 11688378
>dbj|AK069545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025I06, full insert sequence Length = 2911 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 2712 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 2653 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 2652 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 2593 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 2592 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 2533 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 2532 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 2473 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 2472 atccaacagtatttgtca 2455
>dbj|AK067323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B16, full insert sequence Length = 4228 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 3554 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 3495 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 3494 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 3435 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 3434 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 3375 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 3374 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 3315 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 3314 atccaacagtatttgtca 3297
>dbj|AK065420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022D10, full insert sequence Length = 1814 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1175 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 1116 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 1115 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 1056 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 1055 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 996 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 995 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 936 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 935 atccaacagtatttgtca 918
>dbj|AK062262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-H04, full insert sequence Length = 1574 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1445 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 1386 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 1385 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 1326 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 1325 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 1266 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 1265 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 1206 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 1205 atccaacagtatttgtca 1188
>dbj|AK060612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F03, full insert sequence Length = 2563 Score = 317 bits (160), Expect = 2e-83 Identities = 233/258 (90%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 1841 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 1782 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| |||||||||||||||||||||||||||||| | |||||||||||||| |||| | Sbjct: 1781 agttttcctctgatgtctcccagtagcctctgccactggcttctaggaaggtctgaacta 1722 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| || |||||||| |||||||||||||| | |||||||| | Sbjct: 1721 gcttcctgaatgaattggggttggtgtccatgagcctcttcctcatagcctcatcttcaa 1662 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| |||| ||||| || ||||||||||||| Sbjct: 1661 taaatgtggcatttgcctcctcataaacccagttgtcaacctgtccagatgttgcactcc 1602 Query: 475 atccaacagtatttgtca 492 |||||||||||||||||| Sbjct: 1601 atccaacagtatttgtca 1584
>ref|XM_479395.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2855 Score = 262 bits (132), Expect = 1e-66 Identities = 226/258 (87%) Strand = Plus / Minus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 2665 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 2606 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 2605 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 2546 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 2545 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 2486 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| || | ||||| || ||| ||||||||| Sbjct: 2485 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 2426 Query: 475 atccaacagtatttgtca 492 || ||||||| ||||||| Sbjct: 2425 atacaacagtttttgtca 2408
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 262 bits (132), Expect = 1e-66 Identities = 226/258 (87%) Strand = Plus / Plus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 27570523 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 27570582 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 27570583 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 27570642 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 27570643 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 27570702 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| || | ||||| || ||| ||||||||| Sbjct: 27570703 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 27570762 Query: 475 atccaacagtatttgtca 492 || ||||||| ||||||| Sbjct: 27570763 atacaacagtttttgtca 27570780
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 262 bits (132), Expect = 1e-66 Identities = 226/258 (87%) Strand = Plus / Plus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 27516 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 27575 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 27576 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 27635 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 27636 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 27695 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| || | ||||| || ||| ||||||||| Sbjct: 27696 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 27755 Query: 475 atccaacagtatttgtca 492 || ||||||| ||||||| Sbjct: 27756 atacaacagtttttgtca 27773
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 262 bits (132), Expect = 1e-66 Identities = 226/258 (87%) Strand = Plus / Plus Query: 235 accggtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttcca 294 |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 134494 accggtcaattccttcaatcttgtcttcaacctcagagtagagctccctgagcttttcca 134553 Query: 295 agttatcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagca 354 |||| ||||||||||| ||||| |||||||| ||| | ||||||||| |||| |||| | Sbjct: 134554 agttttcctctgatgtttcccattagcctctaccactggcttctaggcaggtctgaacta 134613 Query: 355 ncttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcga 414 ||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| | Sbjct: 134614 gcttcctgaatgaattggggttagtgtccatgagcctcttcctcatagcctcatcttcaa 134673 Query: 415 tgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcc 474 | ||||||| |||||| ||||||||||||||| || | ||||| || ||| ||||||||| Sbjct: 134674 taaatgtggcatttgcctcctcataaacccagttgacaacctgtccagattttgcactcc 134733 Query: 475 atccaacagtatttgtca 492 || ||||||| ||||||| Sbjct: 134734 atacaacagtttttgtca 134751
>gb|AY109455.1| Zea mays CL592_1 mRNA sequence Length = 4066 Score = 190 bits (96), Expect = 3e-45 Identities = 190/222 (85%) Strand = Plus / Minus Query: 239 gtcaattccttcgatcttgtcttcaacctccgagtagagctccctgagcctttccaagtt 298 |||||| || || |||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 3882 gtcaatcccctcaatcttgtcttcaacctccgaatagagctccctgagcctgtccaggtt 3823 Query: 299 atcctctgatgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcanctt 358 ||||| | |||||||||||||||||||||| | ||||| |||||||| || | || ||| Sbjct: 3822 ctcctccgttgtctcccagtagcctctgccactggcttccaggaaggtctgcaccaactt 3763 Query: 359 cctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaa 418 ||||||||||||||| || |||||||| ||||||||||||||| | || || |||||||| Sbjct: 3762 cctgaacgaattggggttggtgtccatgagcctcttcctcatcgcctcgtcctcgatgaa 3703 Query: 419 tgtggtatttgcttcctcataaacccagntgtccacctgccc 460 |||| || || ||||| || |||||| |||| |||||||| Sbjct: 3702 cgtggagttggcctcctcgtagacccagttgtcgacctgccc 3661
>gb|AF457973.1| Zea mays clone cs1.pk0080.d12, mRNA sequence Length = 218 Score = 119 bits (60), Expect = 9e-24 Identities = 129/153 (84%) Strand = Plus / Minus Query: 308 tgtctcccagtagcctctgccatttgcttctaggaaggtttgaagcancttcctgaacga 367 |||||||||||||||||||| | | ||||| |||||||| || | || |||||||||||| Sbjct: 203 tgtctcccagtagcctctgcnactggcttccaggaaggtctgcaccaacttcctgaacga 144 Query: 368 attgggattagtgtccatcagcctcttcctcatctcttcatcttcgatgaatgtggtatt 427 |||||| || |||||||| ||||||||||||||| | || || |||||||| |||| || Sbjct: 143 attggggttggtgtccatgagcctcttcctcatcgcctcgtcctcgatgaacgtggagtt 84 Query: 428 tgcttcctcataaacccagntgtccacctgccc 460 || ||||| || |||||| |||| |||||||| Sbjct: 83 ggcctcctcgtagacccagttgtcgacctgccc 51
>gb|DQ073919.1| Capsicum annuum magnesium chelatase mRNA, partial cds Length = 714 Score = 69.9 bits (35), Expect = 7e-09 Identities = 100/122 (81%) Strand = Plus / Minus Query: 357 ttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgatg 416 |||||||| ||||| ||||| |||| ||| ||||| ||| |||||| ||||||| |||| Sbjct: 538 ttcctgaaagaatttggatttgtgttcatgagcctgttcaacatctcctcatctttgatg 479 Query: 417 aatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactccat 476 || || || |||||||| ||||| ||||| |||| || || || || |||||||||||| Sbjct: 478 aaggttgtgtttgcttcttcatacacccaattgtcaacttgtcctgaagttgcactccat 419 Query: 477 cc 478 || Sbjct: 418 cc 417 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 243 attccttcgatcttgtcttcaacctccgagta 274 |||||||| |||||||||||||| || ||||| Sbjct: 616 attccttcaatcttgtcttcaacttctgagta 647
>gb|DQ376081.1| Vicia faba magnesium chelatase subunit H (CHLH) mRNA, partial sequence Length = 3449 Score = 69.9 bits (35), Expect = 7e-09 Identities = 103/126 (81%) Strand = Plus / Minus Query: 356 cttcctgaacgaattgggattagtgtccatcagcctcttcctcatctcttcatcttcgat 415 |||||| || || |||||||| ||| ||||||| ||||| ||| |||||||||| || Sbjct: 3060 cttcctaaaggagttgggatttgtgctcatcagcttcttcaacatttcttcatcttgaat 3001 Query: 416 gaatgtggtatttgcttcctcataaacccagntgtccacctgcccggatgttgcactcca 475 |||||| || || ||||| ||||| |||||| |||| || || || || ||||||||||| Sbjct: 3000 gaatgttgtgttggcttcttcatacacccagttgtcaacttgtccagacgttgcactcca 2941 Query: 476 tccaac 481 |||||| Sbjct: 2940 tccaac 2935
>gb|AC007263.4|AC007263 Homo sapiens chromosome 14 clone RP11-79J20 containing gene for checkpoint supporessor 1 (CHES1) gene, partial cds, complete sequence Length = 167390 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gaaccaccctctttgttaaagg 117 |||||||||||||||||||||| Sbjct: 124584 gaaccaccctctttgttaaagg 124563
>emb|X73144.1|AMPIX A.majus gene for protoporphyrin IX: Mg Chelatase, subunit Length = 5071 Score = 44.1 bits (22), Expect = 0.43 Identities = 63/77 (81%) Strand = Plus / Minus Query: 405 tcatcttcgatgaatgtggtatttgcttcctcataaacccagntgtccacctgcccggat 464 |||||||||||||| || |||||||| || ||||| ||||| | || || || || || Sbjct: 4668 tcatcttcgatgaaagtagtatttgcctcttcatacacccaattatcgacttgtcctgaa 4609 Query: 465 gttgcactccatccaac 481 ||||||||||| ||||| Sbjct: 4608 gttgcactccagccaac 4592
>emb|AL357093.4|CNS05TDS Human chromosome 14 DNA sequence BAC R-356K23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167254 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gaaccaccctctttgttaaagg 117 |||||||||||||||||||||| Sbjct: 45045 gaaccaccctctttgttaaagg 45024
>emb|AL157736.3|CNS01RG3 Human chromosome 14 DNA sequence Partial sequence from BAC R-945C20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200542 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gaaccaccctctttgttaaagg 117 |||||||||||||||||||||| Sbjct: 133364 gaaccaccctctttgttaaagg 133343
>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete sequence Length = 173925 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 377 agtgtccatcagcctcttcctc 398 |||||||||||||||||||||| Sbjct: 46075 agtgtccatcagcctcttcctc 46096
>gb|AC167663.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940143D9, complete sequence Length = 118759 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 agtgctggaactggttgatcag 222 |||||||||||||||||||||| Sbjct: 81780 agtgctggaactggttgatcag 81759
>gb|AC167560.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940139D9, complete sequence Length = 118752 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 201 agtgctggaactggttgatcag 222 |||||||||||||||||||||| Sbjct: 81777 agtgctggaactggttgatcag 81756
>gb|AC167664.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940124D9, complete sequence Length = 118889 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 agtgctggaactggttgatcag 222 |||||||||||||||||||||| Sbjct: 36975 agtgctggaactggttgatcag 36996
>ref|NM_121366.3| Arabidopsis thaliana GUN5 (GENOMES UNCOUPLED 5) AT5G13630 (GUN5) mRNA, complete cds Length = 4524 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 ccttcgatcttgtcttcaacctccgagta 274 ||||||||||||||||| |||| |||||| Sbjct: 4278 ccttcgatcttgtcttccacctgcgagta 4250
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 tgctggaactggttgatcagt 223 ||||||||||||||||||||| Sbjct: 1118684 tgctggaactggttgatcagt 1118704
>gb|AC124777.4| Mus musculus BAC clone RP23-90I17 from chromosome 12, complete sequence Length = 248983 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 gctccctgagcctttccaagt 297 ||||||||||||||||||||| Sbjct: 25053 gctccctgagcctttccaagt 25073
>gb|AC122013.4| Mus musculus BAC clone RP24-357P7 from chromosome 12, complete sequence Length = 175788 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 gctccctgagcctttccaagt 297 ||||||||||||||||||||| Sbjct: 140818 gctccctgagcctttccaagt 140838
>gb|AC117187.3| Mus musculus BAC clone RP23-41M4 from 1, complete sequence Length = 138404 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ataaattacaaattatacaag 162 ||||||||||||||||||||| Sbjct: 4529 ataaattacaaattatacaag 4549
>gb|AC123556.4| Mus musculus BAC clone RP23-176M9 from 1, complete sequence Length = 198900 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 ataaattacaaattatacaag 162 ||||||||||||||||||||| Sbjct: 159767 ataaattacaaattatacaag 159787
>emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BAC clone T6I14 (ESSA project) Length = 90472 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 ccttcgatcttgtcttcaacctccgagta 274 ||||||||||||||||| |||| |||||| Sbjct: 70044 ccttcgatcttgtcttccacctgcgagta 70072
>gb|AY078971.1| Arabidopsis thaliana AT5g13630/MSH12_9 mRNA, complete cds Length = 4363 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 ccttcgatcttgtcttcaacctccgagta 274 ||||||||||||||||| |||| |||||| Sbjct: 4278 ccttcgatcttgtcttccacctgcgagta 4250
>gb|AY070133.1| Arabidopsis thaliana AT5g13630/MSH12_9 mRNA, complete cds Length = 4267 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 ccttcgatcttgtcttcaacctccgagta 274 ||||||||||||||||| |||| |||||| Sbjct: 4198 ccttcgatcttgtcttccacctgcgagta 4170
>gb|BT002311.1| Arabidopsis thaliana At5g13630/MSH12_9 mRNA, complete cds Length = 4146 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 ccttcgatcttgtcttcaacctccgagta 274 ||||||||||||||||| |||| |||||| Sbjct: 4133 ccttcgatcttgtcttccacctgcgagta 4105
>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12 Length = 79259 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 ccttcgatcttgtcttcaacctccgagta 274 ||||||||||||||||| |||| |||||| Sbjct: 30786 ccttcgatcttgtcttccacctgcgagta 30814
>emb|Z68495.1|ATCHLH A.thaliana CHLH gene Length = 4428 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 ccttcgatcttgtcttcaacctccgagta 274 ||||||||||||||||| |||| |||||| Sbjct: 4270 ccttcgatcttgtcttccacctgcgagta 4242
>gb|AC103941.12| Mus musculus chromosome 9, clone RP23-430I4, complete sequence Length = 172217 Score = 40.1 bits (20), Expect = 6.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 138 ttatataaatta-caaattatacaagtt 164 |||||||||||| ||||||||||||||| Sbjct: 124375 ttatataaattaacaaattatacaagtt 124402
>ref|XM_715650.1| Candida albicans SC5314 putative serine/threonine-protein kinase Hsl1 (CaO19_11784), mRNA Length = 4389 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ttcatcttcgatgaatgtgg 423 |||||||||||||||||||| Sbjct: 66 ttcatcttcgatgaatgtgg 85
>ref|XM_715522.1| Candida albicans SC5314 putative serine/threonine-protein kinase Hsl1 (CaO19_4308), mRNA Length = 4389 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ttcatcttcgatgaatgtgg 423 |||||||||||||||||||| Sbjct: 66 ttcatcttcgatgaatgtgg 85
>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence Length = 255663 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 ttatataaattacaaattat 157 |||||||||||||||||||| Sbjct: 3809 ttatataaattacaaattat 3828
>emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chromosome 9, complete sequence Length = 173933 Score = 40.1 bits (20), Expect = 6.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 138 ttatataaatta-caaattatacaagtt 164 |||||||||||| ||||||||||||||| Sbjct: 158658 ttatataaattaacaaattatacaagtt 158631
>gb|AC124182.4| Mus musculus BAC clone RP23-207J3 from chromosome 15, complete sequence Length = 195532 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ttatataaattacaaattat 157 |||||||||||||||||||| Sbjct: 28925 ttatataaattacaaattat 28906
>gb|AC112342.14| Rattus norvegicus 14 BAC CH230-253H12 (Children's Hospital Oakland Research Institute) complete sequence Length = 150292 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gtcaatgaacatgtgacagc 35 |||||||||||||||||||| Sbjct: 22280 gtcaatgaacatgtgacagc 22299
>emb|AL732591.4| Human DNA sequence from clone RP11-566B18 on chromosome Xq24-25, complete sequence Length = 94595 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tatataaattacaaattata 158 |||||||||||||||||||| Sbjct: 64215 tatataaattacaaattata 64196
>emb|AL691426.9| Human DNA sequence from clone RP11-787B4 on chromosome 9 Contains the 5' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and a CpG island, complete sequence Length = 182777 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aagtaccaatattccccaaa 56 |||||||||||||||||||| Sbjct: 179941 aagtaccaatattccccaaa 179922
>gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tatataaattacaaattata 158 |||||||||||||||||||| Sbjct: 246980 tatataaattacaaattata 246961
>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the 3' end of the DDX31 gene for DEAD/H box polypeptide 31, the BARHL1 gene for BarH-like 1 (Drosophila) protein, two novel genes and three CpG islands, complete sequence Length = 189821 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 atgtctcccagtagcctctg 326 |||||||||||||||||||| Sbjct: 108164 atgtctcccagtagcctctg 108183
>emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 on chromosome Xq25-26.2 Contains the 3' end of the SMARCA1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily a, member 1) and aribosomal protein S26 (RPS26) pseudogene, complete sequence Length = 147394 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 aaattacaaattatacaagt 163 |||||||||||||||||||| Sbjct: 50481 aaattacaaattatacaagt 50462
>emb|CR753840.11| Zebrafish DNA sequence from clone DKEY-208H10 in linkage group 5, complete sequence Length = 121731 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ttatataaattacaaattatacaa 161 ||||| |||||||||||||||||| Sbjct: 65510 ttatacaaattacaaattatacaa 65487
>gb|BC034325.1| Homo sapiens cDNA clone IMAGE:4827542 Length = 1931 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcttcctttttacattcaca 93 |||||||||||||||||||| Sbjct: 1652 gcttcctttttacattcaca 1671
>emb|AL732599.5| Mouse DNA sequence from clone RP24-312B5 on chromosome 4 Contains the 5' end of the Tnfsf8 gene for tumor necrosis factor (ligand) superfamily member 8 and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 95217 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ataaattacaaattatacaa 161 |||||||||||||||||||| Sbjct: 50724 ataaattacaaattatacaa 50705
>gb|AC104590.4| Homo sapiens chromosome 15, clone RP11-643M14, complete sequence Length = 191212 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gcttcctttttacattcaca 93 |||||||||||||||||||| Sbjct: 168726 gcttcctttttacattcaca 168745
>gb|AC012284.5|AC012284 Homo sapiens chromosome 15, clone RP11-1O10, complete sequence Length = 148045 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gcttcctttttacattcaca 93 |||||||||||||||||||| Sbjct: 97729 gcttcctttttacattcaca 97710
>emb|BX830322.1|CNS0A1CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 246 ccttcgatcttgtcttcaacctccgagt 273 ||||||||||||||||| |||| ||||| Sbjct: 629 ccttcgatcttgtcttccacctgcgagt 602
>gb|AC159137.8| Mus musculus 10 BAC RP23-9N9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207728 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 ctttccaagttatcctctgatgtc 311 |||| ||||||||||||||||||| Sbjct: 69385 ctttgcaagttatcctctgatgtc 69362
>gb|AC073947.46| Mus musculus strain C57BL/6J chromosome 9 clone rp23-80d20, complete sequence Length = 247089 Score = 40.1 bits (20), Expect = 6.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 138 ttatataaatta-caaattatacaagtt 164 |||||||||||| ||||||||||||||| Sbjct: 15786 ttatataaattaacaaattatacaagtt 15759
>dbj|AK173865.1| Ciona intestinalis cDNA, clone:ciad063c13, full insert sequence Length = 285 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 140 atataaattacaaattatacaagtttca 167 |||||||||| |||| |||||||||||| Sbjct: 245 atataaattataaatgatacaagtttca 272
>emb|BX537305.32| Zebrafish DNA sequence from clone DKEY-45L12, complete sequence Length = 186856 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tctactcatgcttccttttt 84 |||||||||||||||||||| Sbjct: 131194 tctactcatgcttccttttt 131175
>emb|AL357095.4|CNS05TDU Human chromosome 14 DNA sequence BAC R-48D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181805 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 tattgcatgttacaacttatataaatta 149 ||||||||| | |||||||||||||||| Sbjct: 176724 tattgcatgcttcaacttatataaatta 176751
>dbj|AP006256.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-433N8, complete sequence Length = 198664 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aagtaccaatattccccaaa 56 |||||||||||||||||||| Sbjct: 34386 aagtaccaatattccccaaa 34367
>emb|BX539331.7| Mouse DNA sequence from clone RP23-389M16 on chromosome 7, complete sequence Length = 69108 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 216 tgatcagtgaaatgagttcaccggtcaa 243 |||||||||||||| | ||||||||||| Sbjct: 65153 tgatcagtgaaatgggatcaccggtcaa 65126
>emb|AL162811.6|CNS01RI1 Human chromosome 14 DNA sequence BAC R-101G3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161204 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 tattgcatgttacaacttatataaatta 149 ||||||||| | |||||||||||||||| Sbjct: 20280 tattgcatgcttcaacttatataaatta 20307
>dbj|AB020878.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium cancer , segment 10/10 Length = 110525 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aagtaccaatattccccaaa 56 |||||||||||||||||||| Sbjct: 12673 aagtaccaatattccccaaa 12654 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,172,111 Number of Sequences: 3902068 Number of extensions: 5172111 Number of successful extensions: 104438 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 104168 Number of HSP's gapped (non-prelim): 271 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)