Clone Name | rbah62j16 |
---|---|
Clone Library Name | barley_pub |
>emb|X05167.1|HVLEU Barley gene for thiol protease aleurain Length = 5372 Score = 525 bits (265), Expect = e-146 Identities = 272/273 (99%), Gaps = 1/273 (0%) Strand = Plus / Minus Query: 1 acatacatgagnaaaccctaataaattgctggatcacctacatatatagccatacaacca 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5268 acatacatgag-aaaccctaataaattgctggatcacctacatatatagccatacaacca 5210 Query: 61 tacagaggaagagtacacgcacggggctcactgcaaccgtagtccttgtggtttgtattc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5209 tacagaggaagagtacacgcacggggctcactgcaaccgtagtccttgtggtttgtattc 5150 Query: 121 acagcaaagtttcagttcctgtataccccaatcttcaggttcttgttcgggctgaaaaca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5149 acagcaaagtttcagttcctgtataccccaatcttcaggttcttgttcgggctgaaaaca 5090 Query: 181 ccttattcatgtctggcgaatcgagactgtactcgccgatttggcgcttcttcatgccgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5089 ccttattcatgtctggcgaatcgagactgtactcgccgatttggcgcttcttcatgccgc 5030 Query: 241 cacgacagggtaggaggcgcaggtagcaatagc 273 ||||||||||||||||||||||||||||||||| Sbjct: 5029 cacgacagggtaggaggcgcaggtagcaatagc 4997 Score = 262 bits (132), Expect = 8e-67 Identities = 132/132 (100%) Strand = Plus / Minus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4899 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 4840 Query: 333 acgagttcttgatgagccaatacgggacgccgttctccacaccatagccgactgccaaga 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4839 acgagttcttgatgagccaatacgggacgccgttctccacaccatagccgactgccaaga 4780 Query: 393 cggcgtggttca 404 |||||||||||| Sbjct: 4779 cggcgtggttca 4768
>emb|AJ249847.1|LMU249847 Lolium multiflorum mRNA for cysteine protease (see1 gene) Length = 1345 Score = 214 bits (108), Expect = 2e-52 Identities = 141/152 (92%) Strand = Plus / Minus Query: 230 cttcatgccgccacgacagggtaggaggcgcaggtagcaatagcacacatgttcttgccc 289 ||||||||||||| || ||||||||| ||||||||||| | ||||||||||||||||||| Sbjct: 1117 cttcatgccgccaagatagggtaggacgcgcaggtagcgacagcacacatgttcttgccc 1058 Query: 290 atttccatcttgaagtaaccattgtcaccccagtcggcgccccacgagttcttgatgagc 349 |||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| Sbjct: 1057 atttccatcttgaagtaaccgtcttcaccccagtcggcgccccatgagttcttgatgagc 998 Query: 350 caatacgggacgccgttctccacaccatagcc 381 |||||||||||||| ||||||||||| ||||| Sbjct: 997 caatacgggacgccattctccacaccgtagcc 966 Score = 63.9 bits (32), Expect = 4e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 116 tattcacagcaaagtttcagttcctgtataccccaatcttcaggttcttgttcgggctga 175 |||||||| ||| || ||||| |||||||| || ||||||| || |||| ||||||||| Sbjct: 1226 tattcacaacaaggtcgcagtttctgtatacgcccatcttcatgt-cttgctcgggctga 1168 Query: 176 aaacaccttattcatgtctggcgaatcg 203 |||||| |||||| |||||||| ||||| Sbjct: 1167 aaacacattattcgtgtctggcaaatcg 1140
>dbj|AK066748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074D19, full insert sequence Length = 1486 Score = 170 bits (86), Expect = 2e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 247 agggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttgaagta 306 ||||||||| ||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 1140 agggtaggatgcgcaagtagcaataccgcacatgttcttgcccatttccatcttgaagta 1081 Query: 307 accattgtcaccccagtcggcgccccacgagttcttgatgagccaatacgggacgccgtt 366 |||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| || Sbjct: 1080 accattgtcaccccagtctgcaccccatgagttcttgatgagccagtagggaacgccatt 1021 Query: 367 ctccacaccatagccgactgccaagacggcgtggttca 404 || ||||||||||| || |||| || |||||||||| Sbjct: 1020 ttcgacaccatagccaacggccagaacagcgtggttca 983 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 116 tattcacagcaaagtttcagttcctgtataccc 148 |||||||| |||||||||||| |||||||||| Sbjct: 1260 tattcacaagaaagtttcagtttctgtataccc 1228
>dbj|D90408.1|RICOZC Oryza sativa (japonica cultivar-group) mRNA for oryzain gamma, complete cds Length = 1468 Score = 163 bits (82), Expect = 5e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 247 agggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttgaagta 306 ||||||||| ||||| ||||||||| | |||||||||||||||||||||||| ||||||| Sbjct: 1123 agggtaggatgcgcaagtagcaataccgcacatgttcttgcccatttccatcgtgaagta 1064 Query: 307 accattgtcaccccagtcggcgccccacgagttcttgatgagccaatacgggacgccgtt 366 |||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| || Sbjct: 1063 accattgtcaccccagtctgcaccccatgagttcttgatgagccagtagggaacgccatt 1004 Query: 367 ctccacaccatagccgactgccaagacggcgtggttca 404 || ||||||||||| || |||| || |||||||||| Sbjct: 1003 ttcgacaccatagccaacggccagaacagcgtggttca 966 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 116 tattcacagcaaagtttcagttcctgtataccc 148 |||||||| |||||||||||| |||||||||| Sbjct: 1247 tattcacaagaaagtttcagtttctgtataccc 1215
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgccccac 334 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 16388446 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtctgcaccccat 16388387 Query: 335 gagttcttgatgagccaatacgggacgccgttctccacaccatagccgactgccaagacg 394 ||||||||||||||||| || || ||||| || || ||||||||||| || |||| || Sbjct: 16388386 gagttcttgatgagccagtagggaacgccattttcgacaccatagccaacggccagaaca 16388327 Query: 395 gcgtggttca 404 |||||||||| Sbjct: 16388326 gcgtggttca 16388317 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 116 tattcacagcaaagtttcagttcctgtataccc 148 |||||||| |||||||||||| |||||||||| Sbjct: 16388702 tattcacaagaaagtttcagtttctgtataccc 16388670
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgccccac 334 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 76993 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtctgcaccccat 76934 Query: 335 gagttcttgatgagccaatacgggacgccgttctccacaccatagccgactgccaagacg 394 ||||||||||||||||| || || ||||| || || ||||||||||| || |||| || Sbjct: 76933 gagttcttgatgagccagtagggaacgccattttcgacaccatagccaacggccagaaca 76874 Query: 395 gcgtggttca 404 |||||||||| Sbjct: 76873 gcgtggttca 76864 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 116 tattcacagcaaagtttcagttcctgtataccc 148 |||||||| |||||||||||| |||||||||| Sbjct: 77249 tattcacaagaaagtttcagtttctgtataccc 77217
>emb|AJ844005.1| Plantago major partial mRNA for cysteine protease 1 (cpr1 gene) Length = 806 Score = 133 bits (67), Expect = 5e-28 Identities = 82/87 (94%) Strand = Plus / Minus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 ||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||| Sbjct: 414 cacacatgttcttgcccatctccattttgaagtagccattgtctccccagtcggcgcccc 355 Query: 333 acgagttcttgatgagccaatacggga 359 |||||||||||| |||||||||||||| Sbjct: 354 acgagttcttgacgagccaatacggga 328
>gb|AY106223.1| Zea mays PCO114759 mRNA sequence Length = 1532 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Minus Query: 247 agggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttgaagta 306 ||||||||| || || ||||||| | | |||||||||||||||||||||||||||||||| Sbjct: 1155 agggtaggatgcacacgtagcaacaccgcacatgttcttgcccatttccatcttgaagta 1096 Query: 307 accattgtcaccccagtcggcgccccacgagttcttgatgagccaatacgggac 360 ||||| ||||||||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 1095 accatcatcaccccagtcagcgccccatgagttcttgatgagccagtaggggac 1042
>emb|Y11003.1|NTPPCYSPT N.tabacum mRNA for putative pre-pro-cysteine proteinase, partial Length = 535 Score = 129 bits (65), Expect = 8e-27 Identities = 101/113 (89%) Strand = Plus / Minus Query: 242 acgacagggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttg 301 |||||||||||||| ||||| || |||||| ||||||||||||| ||||| ||||||||| Sbjct: 314 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccatcttg 255 Query: 302 aagtaaccattgtcaccccagtcggcgccccacgagttcttgatgagccaata 354 ||||| |||| ||||||||| || || ||||| |||||||||||||||||||| Sbjct: 254 aagtatccatcgtcaccccaatctgctccccatgagttcttgatgagccaata 202
>emb|X99936.1|ZMSEE1 Z.mays mRNA for cysteine proteinase, See1 Length = 1412 Score = 121 bits (61), Expect = 2e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 247 agggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttgaagta 306 ||||||||| || || ||||||| | | |||||||||||||||||||||||||||||||| Sbjct: 1133 agggtaggatgcacacgtagcaacaccgcacatgttcttgcccatttccatcttgaagta 1074 Query: 307 accattgtcaccccagtcggcgccccacgagttcttgatgagcca 351 ||| | ||||||||||| |||||||| ||||||||||||||||| Sbjct: 1073 accctcatcaccccagtcagcgccccatgagttcttgatgagcca 1029
>gb|DQ084022.1| Nicotiana benthamiana cysteine proteinase aleuran type mRNA, complete cds Length = 1326 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 242 acgacagggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttg 301 |||||||||||||| ||||| || |||||| ||||||||||||| ||||| ||||| ||| Sbjct: 1112 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccattttg 1053 Query: 302 aagtaaccattgtcaccccagtcggcgccccacgagttcttgatgagccaata 354 ||||| |||||||||||||| || || ||||| || ||||||||||||||||| Sbjct: 1052 aagtatccattgtcaccccaatctgctccccatgaattcttgatgagccaata 1000
>dbj|AB032168.1| Nicotiana tabacum NTCP-23 mRNA for cysteine protease, complete cds Length = 1340 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 242 acgacagggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttg 301 |||||||||||||| ||||| || |||||| ||||||||||||| ||||| ||||| ||| Sbjct: 1110 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccattttg 1051 Query: 302 aagtaaccattgtcaccccagtcggcgccccacgagttcttgatgagccaata 354 ||||| |||||||||||||| || || ||||| || ||||||||||||||||| Sbjct: 1050 aagtatccattgtcaccccaatctgctccccatgaattcttgatgagccaata 998
>gb|AY017412.1| Nicotiana tabacum NTCP23-like cysteine proteinase gene, complete cds Length = 2966 Score = 121 bits (61), Expect = 2e-24 Identities = 100/113 (88%) Strand = Plus / Minus Query: 242 acgacagggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttg 301 |||||||||||||| ||||| || |||||| ||||||||||||| ||||| ||||| ||| Sbjct: 2917 acgacagggtaggatgcgcaagtggcaataccacacatgttctttcccatctccattttg 2858 Query: 302 aagtaaccattgtcaccccagtcggcgccccacgagttcttgatgagccaata 354 ||||| |||||||||||||| || || ||||| || ||||||||||||||||| Sbjct: 2857 aagtatccattgtcaccccaatctgctccccatgaattcttgatgagccaata 2805
>dbj|D45403.1|MZECYPA Corn mRNA for cysteine proteinase, clone CCP2, complete cds Length = 1382 Score = 121 bits (61), Expect = 2e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 247 agggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttgaagta 306 ||||||||| || || ||||||| | | |||||||||||||||||||||||||||||||| Sbjct: 1122 agggtaggatgcacacgtagcaacaccgcacatgttcttgcccatttccatcttgaagta 1063 Query: 307 accattgtcaccccagtcggcgccccacgagttcttgatgagcca 351 ||| | ||||||||||| |||||||| ||||||||||||||||| Sbjct: 1062 accctcatcaccccagtcagcgccccatgagttcttgatgagcca 1018
>gb|AY111351.1| Zea mays CL1876_2 mRNA sequence Length = 532 Score = 115 bits (58), Expect = 1e-22 Identities = 116/137 (84%) Strand = Plus / Minus Query: 245 acagggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttgaag 304 ||||||||||| || || ||||||| | | |||||| |||||||||||| |||||| Sbjct: 236 acagggtaggatgcacacgtagcaacaccgcacatgnnnnngcccatttccattttgaag 177 Query: 305 taaccattgtcaccccagtcggcgccccacgagttcttgatgagccaatacgggacgccg 364 ||||| | ||||||||||| |||||||| ||||||||||||||||| || ||||| ||| Sbjct: 176 taaccctcatcaccccagtcagcgccccatgagttcttgatgagccagtaggggacaccg 117 Query: 365 ttctccacaccatagcc 381 ||||| ||||||||||| Sbjct: 116 ttctcgacaccatagcc 100
>ref|NM_125429.2| Arabidopsis thaliana AALP; cysteine-type endopeptidase/ cysteine-type peptidase AT5G60360 (AALP) transcript variant AT5G60360.1 mRNA, complete cds Length = 1468 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1196 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 1137 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1136 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 1077 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 1076 acggccaaaaccgcgtggttca 1055
>gb|AF083703.1| Arabidopsis thaliana clone sps232 unknown mRNA Length = 1355 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1114 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 1055 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1054 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 995 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 994 acggccaaaaccgcgtggttca 973
>gb|BT000676.1| Arabidopsis thaliana clone RAFL08-12-G17 (R11172) putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1331 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1117 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 1058 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1057 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 998 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 997 acggccaaaaccgcgtggttca 976
>gb|BT000674.1| Arabidopsis thaliana clone RAFL05-19-H13 (R10283) putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1366 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1114 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 1055 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1054 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 995 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 994 acggccaaaaccgcgtggttca 973
>gb|BT000673.1| Arabidopsis thaliana clone RAFL07-10-L02 (R10707) putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1409 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1121 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 1062 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1061 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 1002 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 1001 acggccaaaaccgcgtggttca 980
>gb|AF360273.1| Arabidopsis thaliana putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1370 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1088 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 1029 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1028 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 969 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 968 acggccaaaaccgcgtggttca 947
>gb|AY088662.1| Arabidopsis thaliana clone 8989 mRNA, complete sequence Length = 1352 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1128 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 1069 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1068 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 1009 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 1008 acggccaaaaccgcgtggttca 987
>gb|AF233883.1|AF233883 Arabidopsis thaliana AALP protein mRNA, complete cds Length = 1305 Score = 99.6 bits (50), Expect = 7e-18 Identities = 119/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 1058 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaa 999 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 998 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 939 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 938 acggccaaaaccgcgtggttca 917
>gb|AF454960.1|AF454960 Brassica oleracea senescence-associated cysteine protease (CP5) mRNA, complete cds Length = 1332 Score = 97.6 bits (49), Expect = 3e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 266 gcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcg 325 |||||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||| || Sbjct: 1080 gcaataccacacatgttcttccccatctccatcttgaagtaacctttgtcaccccaatct 1021 Query: 326 gcgccccacgagttcttgatgagccaata 354 || ||||| |||||||| || |||||||| Sbjct: 1020 gctccccatgagttctttataagccaata 992
>gb|AY496105.1| Capsicum annuum alternative oxidase 1a precursor (cyp-3) mRNA, complete cds Length = 479 Score = 93.7 bits (47), Expect = 4e-16 Identities = 96/113 (84%) Strand = Plus / Minus Query: 242 acgacagggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttg 301 |||||||||||||| ||||| || |||| | ||||||||||||| ||||| ||||| ||| Sbjct: 306 acgacagggtaggatgcgcaagttgcaacaccacacatgttcttccccatctccattttg 247 Query: 302 aagtaaccattgtcaccccagtcggcgccccacgagttcttgatgagccaata 354 ||||| ||| |||||| || || || ||||| |||||||| ||||||||||| Sbjct: 246 aagtatccactgtcacnncaatctgctccccatgagttctttatgagccaata 194
>gb|U31094.1|PHU31094 Petunia hybrida thiol protease homolog P21 (PeTh3) mRNA, complete cds Length = 1347 Score = 93.7 bits (47), Expect = 4e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 242 acgacagggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttg 301 |||||||||||||| ||||| || |||||| ||||||||| || ||||| ||||| ||| Sbjct: 1085 acgacagggtaggatgcgcaagttgcaataccacacatgtcgttacccatctccattttg 1026 Query: 302 aagtaaccattgtcaccccagtcggcgccccacgagttcttgatgagccaa 352 || || ||||||||||||| || || ||||| |||||||||||||||||| Sbjct: 1025 aaatatgcattgtcaccccaatctgctccccatgagttcttgatgagccaa 975
>gb|DQ209288.1| Brassica napus cysteine protease mRNA, complete cds Length = 1223 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 ||||||||||||| ||||| ||||||||||||||||| ||||||||||| || || |||| Sbjct: 1042 cacacatgttcttccccatctccatcttgaagtaacctttgtcaccccaatccgctcccc 983 Query: 333 acgagttcttgatgagccaata 354 | |||||||| || |||||||| Sbjct: 982 atgagttctttataagccaata 961
>emb|BX829791.1|CNS0A01S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1282 Score = 91.7 bits (46), Expect = 2e-15 Identities = 118/142 (83%) Strand = Plus / Minus Query: 263 gtagcaatagcacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||| ||||||||||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 1121 gtagcaataccacacatgttcttccccatctccatcttgaagtaacctttgtagccccaa 1062 Query: 323 tcggcgccccacgagttcttgatgagccaatacgggacgccgttctccacaccatagccg 382 || || ||||| |||||||| || |||||||| || || |||| || || ||||| || Sbjct: 1061 tccgctccccatgagttcttaataagccaatatggtacaccgtcttcaactccataacca 1002 Query: 383 actgccaagacggcgtggttca 404 || ||||| || |||||||||| Sbjct: 1001 acggccaaaaccgcgtggttca 980
>ref|NM_114400.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT3G45310 transcript variant AT3G45310.1 mRNA, complete cds Length = 1418 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 ||||||||||||| |||||||||||||||||||| |||||||| ||||| || | |||| Sbjct: 1060 cacacatgttctttcccatttccatcttgaagtagccattgtctccccattcacctcccc 1001 Query: 333 acgagttcttgatgagccaatacgggacg 361 | |||||||| || ||||| ||||||||| Sbjct: 1000 atgagttctttataagccagtacgggacg 972
>ref|NM_001035735.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT3G45310 transcript variant AT3G45310.2 mRNA, complete cds Length = 1442 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 ||||||||||||| |||||||||||||||||||| |||||||| ||||| || | |||| Sbjct: 1087 cacacatgttctttcccatttccatcttgaagtagccattgtctccccattcacctcccc 1028 Query: 333 acgagttcttgatgagccaatacgggacg 361 | |||||||| || ||||| ||||||||| Sbjct: 1027 atgagttctttataagccagtacgggacg 999
>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11 Length = 91274 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 ||||||||||||| |||||||||||||||||||| |||||||| ||||| || | |||| Sbjct: 59519 cacacatgttctttcccatttccatcttgaagtagccattgtctccccattcacctcccc 59578 Query: 333 acgagttcttgatgagccaatacgggacg 361 | |||||||| || ||||| ||||||||| Sbjct: 59579 atgagttctttataagccagtacgggacg 59607
>gb|AY091771.1| Arabidopsis thaliana AT3g45310/F18N11_70 mRNA, complete cds Length = 1402 Score = 89.7 bits (45), Expect = 7e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 ||||||||||||| |||||||||||||||||||| |||||||| ||||| || | |||| Sbjct: 1058 cacacatgttctttcccatttccatcttgaagtagccattgtctccccattcacctcccc 999 Query: 333 acgagttcttgatgagccaatacgggacg 361 | |||||||| || ||||| ||||||||| Sbjct: 998 atgagttctttataagccagtacgggacg 970
>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9 Length = 77298 Score = 87.7 bits (44), Expect = 3e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 273 cacacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccc 332 ||||||||||||| ||||| ||||||||||||||||| ||||| ||||| || || |||| Sbjct: 2519 cacacatgttcttccccatctccatcttgaagtaacctttgtcgccccaatccgctcccc 2460 Query: 333 acgagttcttgatgagccaatacgggacgccgttctccacaccatagccgactgccaaga 392 | |||||||| || |||||||| || || |||| || || ||||| || || ||||| | Sbjct: 2459 atgagttcttaataagccaatatggtacaccgtcttcaactccataaccaacggccaaaa 2400 Query: 393 cggcgtggttca 404 | |||||||||| Sbjct: 2399 ccgcgtggttca 2388
>ref|NM_001037029.1| Arabidopsis thaliana AALP; cysteine-type endopeptidase/ cysteine-type peptidase AT5G60360 (AALP) transcript variant AT5G60360.2 mRNA, complete cds Length = 1466 Score = 85.7 bits (43), Expect = 1e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 274 acacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgcccca 333 |||||||||||| ||||| ||||||||||||||||| ||||| ||||| || || ||||| Sbjct: 1185 acacatgttcttccccatctccatcttgaagtaacctttgtcgccccaatccgctcccca 1126 Query: 334 cgagttcttgatgagccaatacgggacgccgttctccacaccatagccgactgccaagac 393 |||||||| || |||||||| || || |||| || || ||||| || || ||||| || Sbjct: 1125 tgagttcttaataagccaatatggtacaccgtcttcaactccataaccaacggccaaaac 1066 Query: 394 ggcgtggttca 404 |||||||||| Sbjct: 1065 cgcgtggttca 1055
>gb|DQ492683.1| Medicago sativa cysteine protease (CP1) mRNA, complete cds Length = 1346 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgccccac 334 ||||| ||||| ||||||||||| |||||||| |||| ||||||||| || | ||||| Sbjct: 1059 cacatattcttccccatttccattttgaagtagccatggtcaccccattcacctccccat 1000 Query: 335 gagttcttgatgagccaata 354 ||||| || ||||||||||| Sbjct: 999 gagtttttaatgagccaata 980
>gb|AY383240.1| Glycine max cysteine proteinase mRNA, partial cds Length = 937 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccag 322 ||||||||||| |||| ||||||||||||||| ||||| ||||||||| Sbjct: 554 cacatgttcttccccaattccatcttgaagtagccattttcaccccag 507
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttcttgatgagccaatacgg 357 ||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 152 tcaccccagtccgcgccccacgagttcttgatgatccagtacgg 109
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttcttgatgagccaatacgg 357 ||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 152 tcaccccagtccgcgccccacgagttcttgatgatccagtacgg 109
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttcttgatgagccaatacgg 357 ||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 152 tcaccccagtccgcgccccacgagttcttgatgatccagtacgg 109
>gb|AY974330.1| Saprolegnia parasitica SPM9F1 cysteine protease mRNA, complete cds Length = 1633 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 298 cttgaagtaaccattgtcaccccagtcggcgccccacgagttcttga 344 ||||| ||| || ||||| |||||||||||||||||||||||||||| Sbjct: 936 cttgatgtagcccttgtcgccccagtcggcgccccacgagttcttga 890
>gb|AF242733.1| Capsicum annuum putative cystein proteinase mRNA, partial cds Length = 841 Score = 60.0 bits (30), Expect = 6e-06 Identities = 89/106 (83%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 249 ggtaggaggcgcaggtagcaatagcacacatgttcttgcccatttccatcttgaagtaac 308 ||||||||||||| || |||| | ||||||| ||||| ||||| ||||| |||||||| | Sbjct: 410 ggtaggaggcgcaagttgcaacatcacacat-ttcttccccatctccat-ttgaagtatc 353 Query: 309 cattgtcaccccagtcggcgccccacgagttcttgatgagccaata 354 || ||||||||| | || ||||| |||||||| ||||||||||| Sbjct: 352 cactgtcacccccatttgctccccatgagttctttatgagccaata 307
>gb|U93166.1|PAU93166 Prunus armeniaca cysteine protease mRNA, complete cds Length = 1444 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgccccac 334 ||||||||||| || | |||||||| ||||| ||||||||||||||| | ||||| Sbjct: 1118 cacatgttcttcccaaactccatcttaaagtagccattgtcaccccagctctctccccaa 1059 Query: 335 gagttcttgatgagcca 351 ||||||||||||||||| Sbjct: 1058 gagttcttgatgagcca 1042
>emb|X93220.2|CACG2 Cicer arietinum partial mRNA for cysteine proteinase (cacG2 gene) Length = 1484 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccc 319 ||||| ||||| |||||||||||||||||||| |||| ||||||| Sbjct: 1034 cacatattcttccccatttccatcttgaagtagccatggtcaccc 990
>emb|Z68291.1|PSRNACP P.sativum mRNA for cysteine protease Length = 1381 Score = 56.0 bits (28), Expect = 9e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgccccac 334 ||||| ||||| ||||||||||| ||||| || |||| ||||||||| || | |||||| Sbjct: 1044 cacatattcttccccatttccattttgaaatagccatggtcaccccaatcacctccccac 985 Query: 335 gagttcttgatgagccaata 354 || || || ||||||||||| Sbjct: 984 gaatttttaatgagccaata 965
>emb|AJ278699.1|PSA278699 Pisum sativum mRNA for protease (elsa gene) Length = 1361 Score = 56.0 bits (28), Expect = 9e-05 Identities = 67/80 (83%) Strand = Plus / Minus Query: 275 cacatgttcttgcccatttccatcttgaagtaaccattgtcaccccagtcggcgccccac 334 ||||| ||||| ||||||||||| ||||| || |||| ||||||||| || | |||||| Sbjct: 1040 cacatattcttccccatttccattttgaaatagccatggtcaccccaatcacctccccac 981 Query: 335 gagttcttgatgagccaata 354 || || || ||||||||||| Sbjct: 980 gaatttttaatgagccaata 961
>ref|NM_127715.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT2G21430 mRNA, complete cds Length = 1177 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 329 ccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||| ||||||||| Sbjct: 1004 ccccacgagttcttgatgatccaatacgg 976
>gb|DQ185429.1| Rosa roxburghii clone D3 defense-related mRNA, partial sequence Length = 403 Score = 50.1 bits (25), Expect = 0.006 Identities = 110/133 (82%), Gaps = 4/133 (3%) Strand = Plus / Minus Query: 248 gggtaggaggcgcaggtagcaatagcacacatgttcttgcccatt-tccatcttgaagta 306 |||||||| || || || |||| | ||||||||||||| ||||| |||||||||||| | Sbjct: 223 gggtaggaagcacaagttgcaacaccacacatgttctt-cccatactccatcttgaagga 165 Query: 307 accattgtcaccccag-tcggcgccccacgagttcttgatgagccaatacgggacgccgt 365 ||||||||||||||| | || ||||| |||||||| || ||||| || ||||| |||| Sbjct: 164 gccattgtcaccccagctttgc-ccccaggagttcttaataagccagtatgggacaccgt 106 Query: 366 tctccacaccata 378 | ||||| ||||| Sbjct: 105 tttccactccata 93
>emb|X74359.1|ATTHIPRO A.thaliana mRNA for putative thiol protease Length = 1060 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 329 ccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||| ||||||||| Sbjct: 842 ccccacgagttcttgatgatccaatacgg 814
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 329 ccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||| ||||||||| Sbjct: 69103 ccccacgagttcttgatgatccaatacgg 69131
>gb|AY089044.1| Arabidopsis thaliana clone 21453 mRNA, complete sequence Length = 1159 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 329 ccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||| ||||||||| Sbjct: 1005 ccccacgagttcttgatgatccaatacgg 977
>dbj|AK175856.1| Arabidopsis thaliana mRNA for putative cysteine proteinase, complete cds, clone: RAFL22-47-O11 Length = 1220 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 329 ccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||| ||||||||| Sbjct: 1024 ccccacgagttcttgatgatccaatacgg 996
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence Length = 145603 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 329 ccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||| ||||||||| Sbjct: 79667 ccccacgagttcttgatgatccaatacgg 79695
>gb|AY841792.1| Triticum aestivum cysteine protease (CP) mRNA, complete cds Length = 1525 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Minus Query: 296 atcttgaagtaaccattgtcaccccagtcggcgccccacgagttcttgatga 347 |||||| ||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct: 1139 atcttgtagtaacccttgtccccccagttctcgccccatgagttcttgatga 1088
>gb|BT008950.1| Triticum aestivum clone wdk1c.pk009.j19:fis, full insert mRNA sequence Length = 935 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Minus Query: 296 atcttgaagtaaccattgtcaccccagtcggcgccccacgagttcttgatga 347 |||||| ||||||| ||||| ||||||| ||||||| ||||||||||||| Sbjct: 553 atcttgtagtaacccttgtccccccagttctcgccccatgagttcttgatga 502
>emb|X75749.1|VSCYSPRO V.sativa L. mRNA for cysteine protease Length = 1361 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/48 (87%) Strand = Plus / Minus Query: 293 tccatcttgaagtaaccattgtcaccccagtcggcgccccacgagttc 340 ||||||||||||||||||| |||||||||| | |||||| |||||| Sbjct: 1020 tccatcttgaagtaaccatcttcaccccagttagtgccccatgagttc 973
>gb|AF462226.1| Narcissus pseudonarcissus putative cysteine proteinase mRNA, partial cds Length = 631 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Minus Query: 296 atcttgaagtaaccattgtcaccccagtcggcgccccacgagttcttgatga 347 |||||| ||||||| || |||||||| | ||||||||||||||||||||| Sbjct: 332 atcttgtagtaacccttctcaccccaattctcgccccacgagttcttgatga 281
>tpe|BN000093.1|HVA000093 TPA: TPA_exp: Hordeum vulgare mRNA for putative cysteine proteinase precursor (sf42 gene) Length = 1438 Score = 48.1 bits (24), Expect = 0.022 Identities = 45/52 (86%) Strand = Plus / Minus Query: 296 atcttgaagtaaccattgtcaccccagtcggcgccccacgagttcttgatga 347 |||||| |||| || ||||| ||||||| ||||||||||||||||||||| Sbjct: 1072 atcttgtagtaccccttgtccccccagttctcgccccacgagttcttgatga 1021
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttc 340 ||||||||||| ||||||||||||||| Sbjct: 1055 tcaccccagtctgcgccccacgagttc 1029
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttc 340 ||||||||||| ||||||||||||||| Sbjct: 1055 tcaccccagtctgcgccccacgagttc 1029
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||||| ||| ||||| Sbjct: 1024 cgccccacgagttcttgatgatccagtacgg 994
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||||| ||| ||||| Sbjct: 21956 cgccccacgagttcttgatgatccagtacgg 21926
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||||| ||| ||||| Sbjct: 14184190 cgccccacgagttcttgatgatccagtacgg 14184160
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttc 340 ||||||||||| ||||||||||||||| Sbjct: 27868953 tcaccccagtctgcgccccacgagttc 27868927
>gb|AY099317.1| Trypanosoma cruzi clone CL Brener cysteine proteinase precursor, gene, complete cds Length = 1404 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 331 ccacgagttcttgatgagccaatacgg 357 ||||||||||||||||| ||||||||| Sbjct: 918 ccacgagttcttgatgatccaatacgg 892
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttc 340 ||||||||||| ||||||||||||||| Sbjct: 77031 tcaccccagtctgcgccccacgagttc 77005
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full insert sequence Length = 1981 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||||||| ||| ||||| Sbjct: 1592 cgccccacgagttcttgatgatccagtacgg 1562
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttc 340 ||||||||||| ||||||||||||||| Sbjct: 969 tcaccccagtctgcgccccacgagttc 943
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttc 340 ||||||||||| ||||||||||||||| Sbjct: 1055 tcaccccagtctgcgccccacgagttc 1029
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttc 340 ||||||||||| ||||||||||||||| Sbjct: 1055 tcaccccagtctgcgccccacgagttc 1029
>ref|XM_312033.2| Anopheles gambiae str. PEST ENSANGP00000022503 (ENSANGG00000016224), partial mRNA Length = 880 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 328 gccccacgagttcttgatgagccaatacgg 357 |||||||||||||||||||| ||| ||||| Sbjct: 732 gccccacgagttcttgatgatccagtacgg 703
>ref|XM_312034.2| Anopheles gambiae str. PEST ENSANGP00000018713 (ENSANGG00000016224), partial mRNA Length = 1636 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 328 gccccacgagttcttgatgagccaatacgg 357 |||||||||||||||||||| ||| ||||| Sbjct: 1488 gccccacgagttcttgatgatccagtacgg 1459
>gb|AF006198.1|AF006198 Giardia muris cysteine protease (GMCP1) mRNA, complete cds Length = 906 Score = 44.1 bits (22), Expect = 0.35 Identities = 31/34 (91%) Strand = Plus / Minus Query: 314 tcaccccagtcggcgccccacgagttcttgatga 347 ||||||||||| | ||||||||||||| |||||| Sbjct: 824 tcaccccagtcagggccccacgagttcctgatga 791
>gb|DQ212052.1| Anopheles quadriannulatus isolate qdch64a defensin (Def) gene, complete cds Length = 1369 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 tacagaggaagagtacacgcacggg 85 ||||||| ||||||||||||||||| Sbjct: 81 tacagagtaagagtacacgcacggg 105
>ref|NM_192773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 317 ccccagtcggcgccccacgagttcttgatgagccaatacgg 357 |||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1004 ccccagtcggtggcccacgagttcttgagcagccagtacgg 964
>gb|BT017759.1| Zea mays clone EL01N0501D06.c mRNA sequence Length = 1131 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 714 cgccccacgagttcttgatga 694
>emb|X82185.1|ZMCYSPRO Z.mays mRNA for cysteine proteinase Length = 693 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 322 cgccccacgagttcttgatga 302
>emb|AJ512653.1|LGU512653 Leishmania guyanensis partial cpb gene for cysteine proteinase b Length = 522 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 329 ccccacgagttcttgatgagccaatacgg 357 ||||||||||||||||| ||||| ||||| Sbjct: 506 ccccacgagttcttgatcagccagtacgg 478
>gb|AF358667.1|AF358667 Oncorhynchus mykiss procathepsin B mRNA, complete cds Length = 1442 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 296 atcttgaagtaaccattgtcaccccagtc 324 ||||||||| | ||||||||||||||||| Sbjct: 1035 atcttgaagaacccattgtcaccccagtc 1007
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 317 ccccagtcggcgccccacgagttcttgatgagccaatacgg 357 |||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 24347718 ccccagtcggtggcccacgagttcttgagcagccagtacgg 24347758
>gb|AF242373.1|AF242373 Ipomoea batatas cysteine protease (SPCP2) mRNA, complete cds Length = 1195 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 996 cgccccacgagttcttgatga 976
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 317 ccccagtcggcgccccacgagttcttgatgagccaatacgg 357 |||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 93622 ccccagtcggtggcccacgagttcttgagcagccagtacgg 93662
>gb|AF138266.1|AF138266 Ipomoea batatas papain-like cysteine proteinase isoform III (IBPCPIII) mRNA, complete cds Length = 1144 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1006 cgccccacgagttcttgatga 986
>gb|AF138265.1|AF138265 Ipomoea batatas papain-like cysteine proteinase isoform II (IBPCPII) mRNA, complete cds Length = 1143 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1006 cgccccacgagttcttgatga 986
>gb|AF138264.1|AF138264 Ipomoea batatas papain-like cysteine proteinase isoform I (IBPCPI) mRNA, complete cds Length = 1149 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1012 cgccccacgagttcttgatga 992
>gb|AF216785.1|AF216785 Ipomoea batatas papain-like cysteine proteinase isoform III (PCPIII) gene, complete cds Length = 1473 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1335 cgccccacgagttcttgatga 1315
>gb|AF216784.1|AF216784 Ipomoea batatas papain-like cysteine proteinase isoform II (PCPII) gene, complete cds Length = 1483 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1346 cgccccacgagttcttgatga 1326
>gb|AF216783.1|AF216783 Ipomoea batatas papain-like cysteine proteinase isoform I (PCPI) gene, complete cds Length = 1474 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1337 cgccccacgagttcttgatga 1317
>dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A05, full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 317 ccccagtcggcgccccacgagttcttgatgagccaatacgg 357 |||||||||| | ||||||||||||||| ||||| ||||| Sbjct: 1084 ccccagtcggtggcccacgagttcttgagcagccagtacgg 1044
>gb|AY104312.1| Zea mays PCO074362 mRNA sequence Length = 2610 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1084 cgccccacgagttcttgatga 1064
>dbj|AP001528.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736K20, complete sequence Length = 155523 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 gatcacctacatatatagccataca 56 |||||||||||||||||| |||||| Sbjct: 20157 gatcacctacatatatagtcataca 20181
>dbj|D45402.1|MZECP Corn mRNA for cysteine proteinase, clone CCP, complete cds Length = 1311 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 cgccccacgagttcttgatga 347 ||||||||||||||||||||| Sbjct: 1023 cgccccacgagttcttgatga 1003
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 ccccagtcggcgccccacgagttcttga 344 ||||| |||| ||||||||||||||||| Sbjct: 1127 ccccactcggggccccacgagttcttga 1100
>emb|CR478208.13| Zebrafish DNA sequence from clone CH211-149M3 in linkage group 16, complete sequence Length = 195111 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catttccatcttgaagtaac 308 |||||||||||||||||||| Sbjct: 120730 catttccatcttgaagtaac 120749
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tgcccatttccatcttgaag 304 |||||||||||||||||||| Sbjct: 667127 tgcccatttccatcttgaag 667108
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A Length = 1299 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 295 catcttgaagtaaccattgtcaccccagtcggcgccccacgagttctt 342 |||| ||| |||||| || ||||||||||| | |||||||||||||| Sbjct: 1020 catcctgatgtaacccttctcaccccagtcctctccccacgagttctt 973
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A Length = 2752 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 295 catcttgaagtaaccattgtcaccccagtcggcgccccacgagttctt 342 |||| ||| |||||| || ||||||||||| | |||||||||||||| Sbjct: 2397 catcctgatgtaacccttctcaccccagtcctctccccacgagttctt 2350
>emb|CR394547.7| Zebrafish DNA sequence from clone CH211-127P22 in linkage group 16, complete sequence Length = 151129 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 catttccatcttgaagtaac 308 |||||||||||||||||||| Sbjct: 80994 catttccatcttgaagtaac 81013
>gb|AC110081.3| Homo sapiens BAC clone RP11-453M2 from 4, complete sequence Length = 44837 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 acatatatagccatacaaccatacagag 67 ||||||||||||||||| ||||||||| Sbjct: 21299 acatatatagccatacacacatacagag 21326
>gb|AF462309.1| Acanthamoeba healyi cysteine proteinase (CP1) mRNA, complete cds Length = 993 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ggcgccccacgagttcttga 344 |||||||||||||||||||| Sbjct: 903 ggcgccccacgagttcttga 884
>gb|AC092624.2| Homo sapiens BAC clone RP11-261J9 from 2, complete sequence Length = 101158 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctggatcacctacatatata 48 |||||||||||||||||||| Sbjct: 16505 ctggatcacctacatatata 16486
>gb|AF213939.1|AF213939 Prunus dulcis cysteine protease (CYP1) mRNA, partial cds Length = 536 Score = 40.1 bits (20), Expect = 5.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 308 ccattgtcaccccagtcggcgccccacgagttcttgatgagcca 351 ||||||||||||||| | ||||| ||||||||||||||||| Sbjct: 533 ccattgtcaccccagctttctccccaagagttcttgatgagcca 490
>gb|AC115289.6| Mus musculus BAC clone RP23-57G16 from 13, complete sequence Length = 210109 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 tcacagcaaagtttcagttc 138 |||||||||||||||||||| Sbjct: 175450 tcacagcaaagtttcagttc 175469
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 317 ccccagtcggcgccccacgagttcttga 344 ||||| |||| ||||||||||||||||| Sbjct: 319 ccccactcggggccccacgagttcttga 346
>gb|AY104930.1| Zea mays PCO132946 mRNA sequence Length = 1422 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 ccccagtcggcgccccacgagttcttga 344 ||||||| || ||||||||||||||||| Sbjct: 1053 ccccagtgggtgccccacgagttcttga 1026
>gb|U94591.1|HVU94591 Hordeum vulgare cysteine proteinase precursor, mRNA, complete cds Length = 1328 Score = 40.1 bits (20), Expect = 5.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 295 catcttgaagtaaccattgtcaccccagtcggcgccccacgagttctt 342 |||| ||| |||||| || ||||||||||| | |||||||||||||| Sbjct: 1028 catcctgatgtaacccttctcaccccagtcctctccccacgagttctt 981 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,665,686 Number of Sequences: 3902068 Number of extensions: 3665686 Number of successful extensions: 360508 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 360287 Number of HSP's gapped (non-prelim): 219 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)