ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62j14 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 234 bits (598), Expect = 1e-61 Identities = 113/113 (100%), Positives = 113/113 (100%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF Sbjct: 212 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 271 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWEQ 254 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWEQ Sbjct: 272 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWEQ 324
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 144 bits (364), Expect = 1e-34 Identities = 73/111 (65%), Positives = 80/111 (72%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKVE IVVIGHS CGGIK L+SL +S F+EDWV+IG PAK KVQ E F Sbjct: 199 VLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCF 258 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 DQCT EKEAVNVSL NLLTYPFV+EG+ TL L GGHYDFV+G FE W Sbjct: 259 ADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELW 309
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 142 bits (357), Expect = 9e-34 Identities = 71/112 (63%), Positives = 81/112 (72%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKVE IVVIGHS CGGIK L+S ++S F+EDWV+I PAK KV E S F Sbjct: 137 VLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAF 196 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWE 257 +DQC E+EAVNVSL NLLTYPFV+EGV GTL L GG+YDFV+G FE WE Sbjct: 197 EDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWE 248
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 138 bits (348), Expect = 1e-32 Identities = 67/111 (60%), Positives = 78/111 (70%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PAK KV E Sbjct: 208 VLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHL 267 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 DDQC + EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 268 DDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 318
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 138 bits (348), Expect = 1e-32 Identities = 67/111 (60%), Positives = 78/111 (70%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PAK KV E Sbjct: 207 VLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHL 266 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 DDQC + EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 267 DDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 317
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 137 bits (346), Expect = 2e-32 Identities = 67/111 (60%), Positives = 78/111 (70%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PAK KV E Sbjct: 208 VLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHL 267 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 DDQC + EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 268 DDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELW 318
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 137 bits (345), Expect = 2e-32 Identities = 67/111 (60%), Positives = 77/111 (69%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PAK KV E Sbjct: 208 VLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHL 267 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 DDQC EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G FE W Sbjct: 268 DDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELW 318
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 137 bits (344), Expect = 3e-32 Identities = 68/111 (61%), Positives = 79/111 (71%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKVE IVVIGHS CGGIK L+S ++S F+EDWV+I PAK KV +E F Sbjct: 214 VLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAF 273 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 +DQC E+EAVNVSL NLLTYPFV+EG+ GTL L GG+YDFV G FE W Sbjct: 274 EDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELW 324
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 135 bits (339), Expect = 1e-31 Identities = 64/111 (57%), Positives = 78/111 (70%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKVE IVVIGHS CGGIK L+S+ D + F+E WV++G PAK KV+ C ++ F Sbjct: 68 VLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEF 127 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 D CT EKEAVNVSL NLLTYPFV++ + N L L G HYDFV+G F+ W Sbjct: 128 ADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLW 178
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 134 bits (338), Expect = 2e-31 Identities = 67/111 (60%), Positives = 78/111 (70%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKVE IVVIGHS CGGIK L+S D + F+EDWV+I PAK KV E + F Sbjct: 197 VLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATF 256 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 +QCT EKEAVNVSL NLLTYPFV++G+ TL L GG+YDFV+G FE W Sbjct: 257 AEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELW 307
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 133 bits (335), Expect = 3e-31 Identities = 67/111 (60%), Positives = 76/111 (68%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V LKV IVVIGHS CGGIK LLS S F+E+WV+IG PAK KV+ + PF Sbjct: 206 VLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPF 265 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 260 + CT EKEAVN SL NLLTYPFV+EG+ N TL L GG+YDFV G FE W Sbjct: 266 AELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELW 316
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 65.1 bits (157), Expect = 1e-10 Identities = 36/107 (33%), Positives = 55/107 (51%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 + AL +E +VV GHS CG +K LL L +D V DW++ ++ V + Sbjct: 85 IAALNIEHVVVCGHSHCGAMKGLLKLNQLQED-MPLVYDWLQHAQATRRLVLDNYSGYET 143 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 272 DD +L E V ++NL TYP V+ + G L++ G Y+ SG+ Sbjct: 144 DDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEVESGE 190
>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)| Length = 274 Score = 53.9 bits (128), Expect = 3e-07 Identities = 32/105 (30%), Positives = 50/105 (47%) Frame = -1 Query: 586 ALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDD 407 AL++ I+V GHS CG +K LL L + + V DW++ ++ V + + +D Sbjct: 87 ALEINQIIVCGHSHCGAMKGLLKL-NSLQEKLPLVYDWLKHTEATRRLVLDNYSHLEGED 145 Query: 406 QCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 272 V E + L+NL TYP + + G L L G Y G+ Sbjct: 146 LIEVAVAENILTQLKNLQTYPAIHSRLHRGDLSLHGWIYRIEEGE 190
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 50.8 bits (120), Expect = 3e-06 Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 2/104 (1%) Frame = -1 Query: 577 VEVIVVIGHSRCGGIKALLSLKDGADDS-FHFVEDWVRIGFPAKKKVQTECA-SMPFDDQ 404 V+ +++ GHS CG ++ + D + ++ +W++ P K++++ S F + Sbjct: 91 VQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKR 150 Query: 403 CTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 272 + E+ + L NLL+Y F++E V N LK+ G HY +G+ Sbjct: 151 SWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWHYIIETGR 194
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 49.7 bits (117), Expect = 6e-06 Identities = 34/112 (30%), Positives = 50/112 (44%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V AL+V IV+ GHS CG + A+ S + D V W+R A + V Sbjct: 85 VAALRVSDIVICGHSNCGAMTAIASCQ--CMDHMPAVSHWLRYADSA-RVVNEARPHSDL 141 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWE 257 + + +E V L NL T+P V+ + G + L G YD SG ++ Sbjct: 142 PSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAFD 193
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 49.7 bits (117), Expect = 6e-06 Identities = 34/112 (30%), Positives = 50/112 (44%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPF 413 V AL+V IV+ GHS CG + A+ S + D V W+R A + V Sbjct: 85 VAALRVSDIVICGHSNCGAMTAIASCQ--CMDHMPAVSHWLRYADSA-RVVNEARPHSDL 141 Query: 412 DDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETWE 257 + + +E V L NL T+P V+ + G + L G YD SG ++ Sbjct: 142 PSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAFD 193
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 2/104 (1%) Frame = -1 Query: 577 VEVIVVIGHSRCGGIKALLSLKDGADDS-FHFVEDWVRIGFPAKKKVQTECA-SMPFDDQ 404 V+ +++ GHS CG ++ + D + ++ +W++ P K++++ S F + Sbjct: 91 VQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWIQFLEPVKEELKNHPQFSNHFAKR 150 Query: 403 CTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 272 + E+ + L NLL+Y F++E + LK+ G HY +G+ Sbjct: 151 SWLTERLNARLQLNNLLSYDFIQEKASKNELKIFGWHYIIETGR 194
>NCE3_YEAST (P53615) Non-classical export protein 3| Length = 221 Score = 35.0 bits (79), Expect = 0.16 Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLS------LKDGADDSFHFVEDWVRIGFPAKKK---V 440 + LKV +++ GH+ CGGIK L+ K + +++D + + + Sbjct: 99 IICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDDIDTMYHEESQNLIHL 158 Query: 439 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFET 263 +T+ + C V K N ++N P V+ V NG L++ G Y+ G +T Sbjct: 159 KTQREKSHYLSHCNV--KRQFNRIIEN----PTVQTAVQNGELQVYGLLYNVEDGLLQT 211
>CAN_HAEIN (P45148) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 229 Score = 35.0 bits (79), Expect = 0.16 Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 4/110 (3%) Frame = -1 Query: 592 VCALKVEVIVVIGHSRCGGIKALLSLKD-GADDSF--HFVEDWVRIGFPAKKKVQTECAS 422 V LK+E I++ GH+ CGGI A ++ KD G +++ H + W + G K + A Sbjct: 85 VDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGKLSPEKRAD 144 Query: 421 MPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNG-TLKLVGGHYDFVSG 275 M L K V + NL VK G L L G YD G Sbjct: 145 M--------LTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>ACCD_PICAB (O47039) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 319 Score = 34.7 bits (78), Expect = 0.21 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +2 Query: 173 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 352 AL+ + D+ L+YV + S TGG + F + GD ++ G ++D+ +G Sbjct: 220 ALYIPQKDNRLLYVSILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKIVIDQTLG 276 Query: 353 QEVLE 367 Q+V+E Sbjct: 277 QKVIE 281
>ACCD_PINTH (P52769) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 321 Score = 34.3 bits (77), Expect = 0.28 Identities = 17/65 (26%), Positives = 34/65 (52%) Frame = +2 Query: 173 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 352 AL+ H+ + L+Y+ + S TGG + F + GD ++ G ++++ +G Sbjct: 220 ALYIHQKEKKLLYISILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKRVIEQTLG 276 Query: 353 QEVLE 367 Q+V+E Sbjct: 277 QKVIE 281
>EF2_METKA (Q8TXJ4) Elongation factor 2 (EF-2) [Contains: Mka fusA intein]| Length = 1257 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 20/98 (20%) Frame = +2 Query: 179 HSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHT-------LL 337 H+ ++ +++ +L G ++ ELAGD++V+ DE+E G T ++ Sbjct: 545 HNFAAEGFVVHNTTLSDQLLAGAGMISE--ELAGDQLVLDFDEMEQERGITIDAANVSMV 602 Query: 338 DERVGQEVL------EGHVD-------GLLLQDGALVI 412 E G+E L GHVD + DGA+V+ Sbjct: 603 HEYEGEEYLINLIDTPGHVDFSGDVTRAMRAVDGAIVV 640
>PYRC_METKA (Q8TXX9) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 426 Score = 30.0 bits (66), Expect = 5.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 188 DVNAMPWECVPVIVQYWMPDGPM*ICHKQ 102 D A+PW +P I + PDGP+ I H + Sbjct: 154 DAPAVPWSTLPEIFRELSPDGPLTIFHPE 182
>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III| Length = 902 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +3 Query: 300 PTSLRVPLVTPSLTNG*VKRFWRDTLTA----SFSRTVHWSSKGMEAHSVCT 443 P L++P +T ++ +++W + LTA S +RT +W SK + H + T Sbjct: 390 PEELKLPEITALSSSNTREKYWDNVLTAHKNDSSARTWNWKSKTLGQHVLPT 441
>PHP_DROME (P39769) Polyhomeotic-proximal chromatin protein| Length = 1589 Score = 29.6 bits (65), Expect = 6.8 Identities = 26/97 (26%), Positives = 43/97 (44%) Frame = +3 Query: 300 PTSLRVPLVTPSLTNG*VKRFWRDTLTASFSRTVHWSSKGMEAHSVCTFFLAGNPILTQS 479 PT+ VP+ +P +DT T S T S +EA S L+ +S Sbjct: 1136 PTATLVPIGSPKTPVS-----GKDTCTTPKSSTPATVSASVEASSSTGEALSNGDASDRS 1190 Query: 480 STKWKESSAPSLSESRALIPPQRLWPITTMTSTLSAQ 590 ST K ++ P+ +S A + P P +T +++S + Sbjct: 1191 STPSKGATTPTSKQSNAAVQP----PSSTTPNSVSGK 1223
>REPM_STAAU (P14490) Replication initiation protein| Length = 314 Score = 29.6 bits (65), Expect = 6.8 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = +3 Query: 384 SFSRTVHWSSKGMEAHSVCTFFLAGNPILTQSST----KWKESSAPSLSESRALIPPQRL 551 +FS+T + +S+ ++AH VCT NP L+ + ++SA LS+ +L P RL Sbjct: 20 NFSKTGYSNSR-LDAHFVCT----SNPKLSFDAMTIVGNLNKNSAKKLSDFMSLDPQIRL 74 Query: 552 WPI 560 W I Sbjct: 75 WDI 77
>I18BP_MOUSE (Q9Z0M9) Interleukin-18-binding protein precursor (IL-18BP)| (Interferon gamma-inducing factor-binding protein) Length = 191 Score = 29.6 bits (65), Expect = 6.8 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -2 Query: 198 SSDRCECNAMGVRTRYCPVLDAGWPDVNLP*AIEPFFLHHFLTRNCTA 55 S D C + V T+ P LD WP+ +P L+ LT +CTA Sbjct: 41 SKDPCSSWSPAVPTKQYPALDVIWPEKEVP-------LNGTLTLSCTA 81
>LPSBP_PERAM (P26305) Hemolymph lipopolysaccharide-binding protein precursor| (LPS-binding protein) (LPS-BP) Length = 256 Score = 29.3 bits (64), Expect = 8.9 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -1 Query: 397 VLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFET 263 ++ E + LQNL + EG TN +G H FV G+F T Sbjct: 157 IINSEDESKVLQNLFSKVTKTEGATNNDYIFIGIHDRFVEGEFIT 201
>ACCD_CHLVU (P56293) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 411 Score = 29.3 bits (64), Expect = 8.9 Identities = 16/63 (25%), Positives = 32/63 (50%) Frame = +2 Query: 173 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 352 ALH H++ L+Y+ + S TGG + F + GD + L G G ++++ + Sbjct: 192 ALHIHQNCAKLLYISVLTSPTTGG---VTASFAMLGDLLFAEPKALIGFAGRRVIEQTLQ 248 Query: 353 QEV 361 +++ Sbjct: 249 EQL 251
>LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor| Length = 226 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = -1 Query: 307 LVGGHYDFVSGKFETWEQ*IFPTG*LRHIQTYIYQDIVRSM 185 ++ G YD + TW + +FPTG Q Y+ Q + S+ Sbjct: 163 MIQGSYDLHGRRLHTWNRIVFPTGAPPAKQRYLVQLTITSL 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,433,093 Number of Sequences: 219361 Number of extensions: 1722566 Number of successful extensions: 5890 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5627 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5883 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
