ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62j13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 408 bits (206), Expect = e-111 Identities = 336/377 (89%), Gaps = 9/377 (2%) Strand = Plus / Minus Query: 2 tatattataaatatgcacacaggtgttgtatatgtgtaggcggtgctagaatttacatat 61 ||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 1460 tatataataaatat-cacactggtgttgtatatgtgtagccggtgctagaatttacatat 1402 Query: 62 gcatatatgctccacaacctatgctcgtacatacacagatcatagagaag-aaaattatg 120 |||| ||||||||||||||| ||||||| |||||||||||| |||| |||| |||| Sbjct: 1401 gcat----gctccacaacctatgttcgtacaaacacagatcataccgaaggaaaaatatg 1346 Query: 121 ctctggtcggaaagcagagtcgtggacaaaagtgaagttcacaaaagaccttcatacgac 180 |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 1345 ctctggtcgggaagcagagtcctggacaaaagtgaagttcacaaaagacaatcatac--- 1289 Query: 181 ataggccattctttcacctcgtagtttatgccttgccggactcctcgcaacccggtggcc 240 |||||||||| ||| | ||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1288 ataggccattgttttaactcgtagtttaggccttgccagactcctcgcaacccggtggcc 1229 Query: 241 tgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 1228 tgaatgcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatgacgcgga 1169 Query: 301 cgtaagcgtcagggtactccttcttgaccttctccacctcgttaagcacctgtgnancgn 360 | || ||||||||||||||||||||||||| |||||||||||| |||||||| | || Sbjct: 1168 cataggcgtcagggtactccttcttgacctcctccacctcgttgagcacctgcgtggcgt 1109 Query: 361 cggngcacccaaacata 377 ||| |||||| |||||| Sbjct: 1108 cggtgcacccgaacata 1092 Score = 260 bits (131), Expect = 3e-66 Identities = 302/354 (85%), Gaps = 10/354 (2%) Strand = Plus / Minus Query: 2 tatattataaatatgcacacaggtgttgtatatgtgtaggcggtgctagaatttacatat 61 ||||| |||||||| |||| ||||||||||||||||||| | ||||||||||||||| || Sbjct: 5863 tatataataaatat-cacataggtgttgtatatgtgtagtcagtgctagaatttacacat 5805 Query: 62 gcatatatgctccacaacctatgctcgtacatacacagatcatagagaa-gaaaattatg 120 ||| ||||||||||| ||| ||||||||||||| || ||| |||| ||||| |||| Sbjct: 5804 gcac----gctccacaaccaatgttcgtacatacacatattatacagaacgaaaaatatg 5749 Query: 121 ctctggtcggaaagcagagtcgtggacaaaagtgaagttcacaaaagaccttcatacgac 180 ||||||| || | ||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 5748 ctctggtaggca-gcagagtcgtggagaaaagtgaagttcacaaaagaccttcgtac--- 5693 Query: 181 ataggccattctttcacctcgtagtttatgccttgccggactcctcgcaacccggtggcc 240 |||||||||| ||||| ||| |||| || ||||||||||||||||| ||| |||| | | Sbjct: 5692 ataggccattgtttcaactcatagtctaggccttgccggactcctcacaagtcggtagac 5633 Query: 241 tgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||| |||||| ||||||| |||||||| | || ||||||||||||| ||||| ||| Sbjct: 5632 tgaaggtgatgaaagtgacgcaatgcacctggcacatgttgtcgaagccgttgataagga 5573 Query: 301 cgtaagcgtcagggtactccttcttgaccttctccacctcgttaagcacctgtg 354 | || ||||| |||||||||||||||||| ||||||||| || |||||||||| Sbjct: 5572 catagccgtcaaggtactccttcttgacctcctccacctccttgagcacctgtg 5519 Score = 149 bits (75), Expect = 8e-33 Identities = 111/123 (90%) Strand = Plus / Minus Query: 229 aacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagc 288 |||| ||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 4301 aaccaggtggcccgaaggtgatgaagctgacgcactacacctggcgcaggttgtcgaagc 4242 Query: 289 cgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcgttaagca 348 ||||||| | ||| || ||||||||||||||||||||||||| ||||||||| || |||| Sbjct: 4241 cgatgatgcagacataggcgtcagggtactccttcttgacctcctccacctccttgagca 4182 Query: 349 cct 351 ||| Sbjct: 4181 cct 4179 Score = 127 bits (64), Expect = 3e-26 Identities = 123/140 (87%), Gaps = 7/140 (5%) Strand = Plus / Minus Query: 24 gtgttgtatatgtgtaggcggtgctagaatttacatatgcatatatgctccacaacctat 83 ||||||||||||| || |||||||||| |||||| |||||| |||||||||||||| Sbjct: 4491 gtgttgtatatgt--agccggtgctagagtttacacatgcat----gctccacaacctat 4438 Query: 84 gctcgtacatacacagatcatagagaagaaaa-ttatgctctggtcggaaagcagagtcg 142 | | |||||||||||||||||| |||| |||| ||||||| |||||||||||||||||| Sbjct: 4437 gtttgtacatacacagatcatacagaacaaaaattatgcttaggtcggaaagcagagtcg 4378 Query: 143 tggacaaaagtgaagttcac 162 |||| ||||||||||||||| Sbjct: 4377 tggagaaaagtgaagttcac 4358
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 323 bits (163), Expect = 2e-85 Identities = 219/239 (91%) Strand = Plus / Minus Query: 139 gtcgtggacaaaagtgaagttcacaaaagaccttcatacgacataggccattctttcacc 198 |||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||| | Sbjct: 1576 gtcgtggacaaaagtgaagttcacaaaagatcttcatatgagataggccattgtttcaac 1517 Query: 199 tcgtagtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctga 258 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1516 tcatagtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctga 1457 Query: 259 cgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtact 318 ||||||||||||| |||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 1456 cgcactgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtact 1397 Query: 319 ccttcttgaccttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 |||||||||||| |||||||||||| |||||||||| || ||| |||||| |||||| Sbjct: 1396 ccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacata 1338 Score = 58.0 bits (29), Expect = 2e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 89 tacatacacagatcatagagaagaaaat-tatgctctggtcggaaagcagagtcgtg 144 |||||||||| |||||| |||| |||| ||||||| |||||||||||||||||||| Sbjct: 1641 tacatacacaaatcatatagaacaaaaggtatgctccggtcggaaagcagagtcgtg 1585
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 256 bits (129), Expect = 5e-65 Identities = 132/133 (99%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 545 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 486 Query: 342 ttaagcacctgtg 354 ||||||||||||| Sbjct: 485 ttaagcacctgtg 473
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 238 bits (120), Expect = 1e-59 Identities = 155/168 (92%) Strand = Plus / Minus Query: 210 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455 Query: 270 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 329 || |||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 454 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 395 Query: 330 ttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||||||| |||||||||| || ||| |||||| |||||| Sbjct: 394 tcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacata 347
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 230 bits (116), Expect = 3e-57 Identities = 154/168 (91%) Strand = Plus / Minus Query: 210 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 269 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922 Query: 270 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 329 || || ||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 921 tggcgtaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 862 Query: 330 ttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||||||| |||||||||| | || ||| |||||| |||||| Sbjct: 861 tcctccacctcgttgagcacctgtgtagcgtcggtgcacccgaacata 814
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 228 bits (115), Expect = 1e-56 Identities = 144/155 (92%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 721 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 662 Query: 342 ttaagcacctgtgnancgncggngcacccaaacat 376 || |||||||||| || ||| |||||||||||| Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccaaacat 627
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 226 bits (114), Expect = 4e-56 Identities = 158/174 (90%) Strand = Plus / Minus Query: 204 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 263 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 616 gtttatgccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 557 Query: 264 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 323 |||||||| |||| ||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 556 tgcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttc 497 Query: 324 ttgaccttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 ||||||| |||||||||||| | |||||||| || ||| |||||| |||||| Sbjct: 496 ttgacctcctccacctcgttgatcacctgtgtggcgtcggtgcacccgaacata 443
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 222 bits (112), Expect = 6e-55 Identities = 144/156 (92%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||||| || ||| |||||| |||||| Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacata 637
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 222 bits (112), Expect = 6e-55 Identities = 144/156 (92%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||||| || ||| |||||| |||||| Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacata 637
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 222 bits (112), Expect = 6e-55 Identities = 153/168 (91%) Strand = Plus / Minus Query: 210 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 269 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575 Query: 270 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 329 || |||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 574 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 515 Query: 330 ttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||||||| |||||||| | || ||| |||||| |||||| Sbjct: 514 tcctccacctcgttgagcacctgcgtggcgtcggtgcacccgaacata 467
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 214 bits (108), Expect = 2e-52 Identities = 143/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||||| || ||| |||||| |||||| Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacata 632
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 214 bits (108), Expect = 2e-52 Identities = 143/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||||| || ||| |||||| |||||| Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacata 632
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 214 bits (108), Expect = 2e-52 Identities = 143/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 669 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 668 tcgaagccgatgacgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 609 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||||| || ||| |||||| |||||| Sbjct: 608 ttgagcacctgtgtggcgtcggtgcacccgaacata 573
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 214 bits (108), Expect = 2e-52 Identities = 143/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 486 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||||| || ||| |||||| |||||| Sbjct: 485 ttgagcacctgtgtggcgtcggtgcacccgaacata 450
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 212 bits (107), Expect = 6e-52 Identities = 142/155 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 721 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 662 Query: 342 ttaagcacctgtgnancgncggngcacccaaacat 376 || |||||||||| || ||| |||||| ||||| Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccgaacat 627
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 210 bits (106), Expect = 2e-51 Identities = 156/174 (89%) Strand = Plus / Minus Query: 204 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 263 ||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 344 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcac 285 Query: 264 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 323 |||||||| |||| ||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 284 tgcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttc 225 Query: 324 ttgaccttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 ||||||| |||||||||||| | |||||||| || ||| |||||| |||||| Sbjct: 224 ttgacctcctccacctcgttgatcacctgtgtggcgtcggtgcacccgaacata 171
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 206 bits (104), Expect = 4e-50 Identities = 142/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || || |||||||||||||||||||||| |||||||||| Sbjct: 727 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 668 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||||| || ||| |||||| |||||| Sbjct: 667 ctgagcacctgtgtggcgtcggtgcacccgaacata 632
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 206 bits (104), Expect = 4e-50 Identities = 142/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 544 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||| | || ||| |||||| |||||| Sbjct: 484 ttgagcacctgcgtggcgtcggtgcacccgaacata 449
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 206 bits (104), Expect = 4e-50 Identities = 142/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||| | || ||| |||||| |||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacata 449
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 206 bits (104), Expect = 4e-50 Identities = 142/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| |||||||||||||||||||||||||||| ||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataagcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||| | || ||| |||||| |||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacata 450
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 206 bits (104), Expect = 4e-50 Identities = 142/156 (91%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 || |||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 544 tcaaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||||| || ||| |||||| |||||| Sbjct: 484 ttgagcacctgtgtggcgtcggtgcacccgaacata 449
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 206 bits (104), Expect = 4e-50 Identities = 131/140 (93%) Strand = Plus / Minus Query: 210 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 269 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566 Query: 270 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 329 || |||||||||||||||||| ||| |||||| || || ||||||||||||||||||||| Sbjct: 565 tggcgcaggttgtcgaagccgttgacacggacataggcatcagggtactccttcttgacc 506 Query: 330 ttctccacctcgttaagcac 349 | |||||||||||| ||||| Sbjct: 505 tcctccacctcgttgagcac 486
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 200 bits (101), Expect = 2e-48 Identities = 125/133 (93%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 342 ttaagcacctgtg 354 | |||||||||| Sbjct: 667 atcagcacctgtg 655
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 200 bits (101), Expect = 2e-48 Identities = 125/133 (93%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctataggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 342 ttaagcacctgtg 354 || |||||||||| Sbjct: 667 ttcagcacctgtg 655
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 200 bits (101), Expect = 2e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 210 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 269 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676 Query: 270 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 329 || |||| ||||||||| |||||||| ||||| || |||||||||||||||||||||||| Sbjct: 675 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 616 Query: 330 ttctccacctcgttaagcacctgtg 354 | |||||||||||| | |||||||| Sbjct: 615 tcctccacctcgttgatcacctgtg 591
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 198 bits (100), Expect = 9e-48 Identities = 121/128 (94%) Strand = Plus / Minus Query: 227 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaa 286 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 783 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaa 724 Query: 287 gccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcgttaag 346 |||||||| |||||| || ||||||||||||||||||||||||| ||||||||| || || Sbjct: 723 gccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcattgag 664 Query: 347 cacctgtg 354 |||||||| Sbjct: 663 cacctgtg 656
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 198 bits (100), Expect = 9e-48 Identities = 141/156 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 713 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 712 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 653 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||| | || ||| |||||| |||||| Sbjct: 652 ctgagcacctgcgtggcgtcggtgcacccgaacata 617
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 198 bits (100), Expect = 9e-48 Identities = 141/156 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||| | || ||| |||||| |||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacata 450
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 198 bits (100), Expect = 9e-48 Identities = 141/156 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||| | || ||| |||||| |||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacata 450
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 198 bits (100), Expect = 9e-48 Identities = 141/156 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||| | || ||| |||||| |||||| Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacata 450
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 198 bits (100), Expect = 9e-48 Identities = 141/156 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||| | || ||| |||||| |||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacata 449
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 198 bits (100), Expect = 9e-48 Identities = 150/168 (89%) Strand = Plus / Minus Query: 210 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 269 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590 Query: 270 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 329 || |||| ||||||||| |||||||| ||||| || |||||||||||||||||||||||| Sbjct: 589 tggcgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 530 Query: 330 ttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||||||| | |||||| | || ||| |||||| |||||| Sbjct: 529 tcctccacctcgttgatcacctgcgtggcgtcggtgcacccgaacata 482
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 192 bits (97), Expect = 6e-46 Identities = 127/137 (92%) Strand = Plus / Minus Query: 204 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 263 ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 495 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 436 Query: 264 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 323 |||||||| |||| ||||||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 435 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 376 Query: 324 ttgaccttctccacctc 340 ||||||| ||||||||| Sbjct: 375 ttgacctcctccacctc 359
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 190 bits (96), Expect = 2e-45 Identities = 137/152 (90%) Strand = Plus / Minus Query: 226 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcga 285 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 785 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcga 726 Query: 286 agccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcgttaa 345 ||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| || | Sbjct: 725 agccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcattga 666 Query: 346 gcacctgtgnancgncggngcacccaaacata 377 ||||||| | || ||| |||||| |||||| Sbjct: 665 gcacctgagtggcgtcggtgcacccgaacata 634
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || || |||||||||||||||||||||| |||||||||| Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486 Query: 342 ttaagcac 349 || ||||| Sbjct: 485 ttgagcac 478
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 190 bits (96), Expect = 2e-45 Identities = 120/128 (93%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || || |||||||||||||||||||||| |||||||||| Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486 Query: 342 ttaagcac 349 || ||||| Sbjct: 485 ttgagcac 478
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 190 bits (96), Expect = 2e-45 Identities = 140/156 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 548 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 547 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 488 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||| | || ||| |||||| |||||| Sbjct: 487 ttgagcacctgcgtggcgtcggtgcacccgaacata 452
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 190 bits (96), Expect = 2e-45 Identities = 140/156 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctgacgcaggttg 552 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 551 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 492 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 || |||||||| | || ||| |||||| |||||| Sbjct: 491 ttgagcacctgcgtggcgtcggtgcacccgaacata 456
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 190 bits (96), Expect = 2e-45 Identities = 140/156 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcccaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||| | || ||| |||||| |||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacata 449
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 190 bits (96), Expect = 2e-45 Identities = 140/156 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||| ||||||||||||||||| |||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagagtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||| | || ||| |||||| |||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacata 449
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 190 bits (96), Expect = 2e-45 Identities = 140/156 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||| | || ||| |||||| |||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacata 449
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 190 bits (96), Expect = 2e-45 Identities = 140/156 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 342 ttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||| | || ||| |||||| |||||| Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacata 449
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 188 bits (95), Expect = 9e-45 Identities = 137/151 (90%) Strand = Plus / Minus Query: 204 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 263 |||||||||||||| ||||||| ||| || |||||| |||| |||||||||||||||||| Sbjct: 550 gtttatgccttgcccgactcctggcagcctggtggcttgaaagcgatgaagctgacgcac 491 Query: 264 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 323 |||||||| |||| ||||||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 490 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 431 Query: 324 ttgaccttctccacctcgttaagcacctgtg 354 ||||||| |||||||||||| |||||||||| Sbjct: 430 ttgacctcctccacctcgttgagcacctgtg 400
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 188 bits (95), Expect = 9e-45 Identities = 122/131 (93%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 532 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 531 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 472 Query: 342 ttaagcacctg 352 || |||||||| Sbjct: 471 ttgagcacctg 461
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 186 bits (94), Expect = 3e-44 Identities = 152/173 (87%) Strand = Plus / Minus Query: 205 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 264 |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||| Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcact 537 Query: 265 gcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttct 324 ||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 536 gcacctggcgcatgttgtcgaagccgatgacgcggacataggcgtcagggtactccttct 477 Query: 325 tgaccttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 |||||| ||||||||| || |||||||| | || ||| |||||| |||||| Sbjct: 476 tgacctcctccacctcattgagcacctgcgtggcgtcggtgcacccgaacata 424
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 168 bits (85), Expect = 8e-39 Identities = 121/133 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 |||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 342 ttaagcacctgtg 354 || | |||||||| Sbjct: 377 ttgatcacctgtg 365
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 167 bits (84), Expect = 3e-38 Identities = 146/168 (86%) Strand = Plus / Minus Query: 210 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 269 ||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522 Query: 270 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 329 || |||| ||||||||| ||||||| ||||| || || ||||||||||||||||| ||| Sbjct: 521 tggcgcatgttgtcgaaaccgatgacgcggacatacgcatcagggtactccttcttaacc 462 Query: 330 ttctccacctcgttaagcacctgtgnancgncggngcacccaaacata 377 | |||||||||||| |||||||||| || ||| |||||| |||||| Sbjct: 461 tcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacata 414
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 165 bits (83), Expect = 1e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 |||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctc 379
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 163 bits (82), Expect = 5e-37 Identities = 118/130 (90%) Strand = Plus / Minus Query: 225 tcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcg 284 ||||| ||||||||| ||||||||||||||||||||||||||||||| || | ||||||| Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttgtcg 435 Query: 285 aagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcgtta 344 ||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| || Sbjct: 434 aagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctccttg 375 Query: 345 agcacctgtg 354 | |||||||| Sbjct: 374 atcacctgtg 365
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 161 bits (81), Expect = 2e-36 Identities = 140/161 (86%) Strand = Plus / Minus Query: 216 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgc 275 ||||| |||||||| || |||||| |||||||||||||||||||||||||||| || || Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526 Query: 276 aggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctcc 335 | |||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||| Sbjct: 525 atgttgtcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctcc 466 Query: 336 acctcgttaagcacctgtgnancgncggngcacccaaacat 376 ||||| || | |||||||| || ||| |||||| ||||| Sbjct: 465 acctccttgatcacctgtgaggcgtcggtgcacccgaacat 425
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 161 bits (81), Expect = 2e-36 Identities = 120/133 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcaagtta 725 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 ||||| |||||||| ||||| || ||||||||||||||||||||||||| ||||| ||| Sbjct: 724 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttgacctcctccagctcc 665 Query: 342 ttaagcacctgtg 354 || | |||||||| Sbjct: 664 ttgatcacctgtg 652
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 153 bits (77), Expect = 5e-34 Identities = 119/133 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| || |||||| ||||||||||||||||||| ||||||||||| || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 |||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 342 ttaagcacctgtg 354 || | |||||||| Sbjct: 377 ttgatcacctgtg 365
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 149 bits (75), Expect = 8e-33 Identities = 123/139 (88%) Strand = Plus / Minus Query: 216 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgc 275 ||||| |||||||| ||||||||| |||| ||||||||||||||||||||||| || || Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560 Query: 276 aggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctcc 335 | |||||||||||||||||| || || || ||||||||||||||||||||||||| |||| Sbjct: 559 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 500 Query: 336 acctcgttaagcacctgtg 354 ||||| || | |||||||| Sbjct: 499 acctccttgatcacctgtg 481
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 149 bits (75), Expect = 8e-33 Identities = 108/119 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| || |||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 534 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 |||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 533 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctc 475
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 149 bits (75), Expect = 8e-33 Identities = 108/119 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| || |||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 528 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 |||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 527 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctc 469
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 149 bits (75), Expect = 8e-33 Identities = 134/155 (86%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| ||||||||||||| |||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 |||||||||||||| ||||| || |||||||||||||| |||||||||| ||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactctttcttgacctcctccacctcc 378 Query: 342 ttaagcacctgtgnancgncggngcacccaaacat 376 || | |||||||| || ||| |||||| ||||| Sbjct: 377 ttgatcacctgtgaggcgtcggtgcacccgaacat 343
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 149 bits (75), Expect = 8e-33 Identities = 108/119 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 |||||||||||||| ||||| || ||||||||||||||||||||||||| ||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctctacctc 379
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 149 bits (75), Expect = 8e-33 Identities = 108/119 (90%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| ||||||||||||||||||| |||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 |||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctc 379
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 147 bits (74), Expect = 3e-32 Identities = 122/138 (88%) Strand = Plus / Minus Query: 204 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 263 ||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||| || Sbjct: 576 gtttaggccttgccggactcctcgcagcccggtggcttggaggcgatgaagctgacggac 517 Query: 264 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 323 |||||||| |||| ||||||||| |||||||| ||| || | |||||||||||||||| Sbjct: 516 tgcacctgacgcatgttgtcgaatccgatgatgcggcaataggggtcagggtactccttc 457 Query: 324 ttgaccttctccacctcg 341 |||||| |||||||||| Sbjct: 456 ctgacctcctccacctcg 439
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 145 bits (73), Expect = 1e-31 Identities = 118/133 (88%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 |||||||||||||| || || || ||||||||||||||||||||||||| ||| ||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcaacctcc 378 Query: 342 ttaagcacctgtg 354 || | |||||||| Sbjct: 377 ttgatcacctgtg 365
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 141 bits (71), Expect = 2e-30 Identities = 122/139 (87%) Strand = Plus / Minus Query: 216 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgc 275 ||||| |||||||| || |||||| |||| ||||||||||||||||||||||| || || Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttggcgg 533 Query: 276 aggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctcc 335 | |||||||||||||||||| || || || ||||||||||||||||||||||||| |||| Sbjct: 532 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 473 Query: 336 acctcgttaagcacctgtg 354 ||||| || | |||||||| Sbjct: 472 acctccttgatcacctgtg 454
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 ||||||||||||| || || || ||||||||||||| ||||||||||| ||||||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctc 379
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 ||||||||||||| || || || ||||||||||||| ||||||||||| ||||||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctc 379
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| || |||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 531 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 ||||| |||||||| ||||| || |||||||||||||||||||| |||| ||||||||| Sbjct: 530 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttcacctcctccacctc 472
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 139 bits (70), Expect = 7e-30 Identities = 108/122 (88%) Strand = Plus / Minus Query: 256 tgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggt 315 |||||||||||||||| ||||||||||| |||||||||| |||||| || |||||||||| Sbjct: 738 tgacgcactgcacctggcgcaggttgtcaaagccgatgacacggacataggcgtcagggt 679 Query: 316 actccttcttgaccttctccacctcgttaagcacctgtgnancgncggngcacccaaaca 375 ||||||||||||||| |||||||||| | |||||||||| || ||| |||||| |||| Sbjct: 678 actccttcttgacctcctccacctcgctgagcacctgtgtggcgtcggtgcacccgaaca 619 Query: 376 ta 377 || Sbjct: 618 ta 617
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 137 bits (69), Expect = 3e-29 Identities = 117/133 (87%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| || |||||| ||||||||||||||||||| |||||||| || || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 || ||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||| Sbjct: 437 tctaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 342 ttaagcacctgtg 354 || | |||||||| Sbjct: 377 ttgatcacctgtg 365
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 137 bits (69), Expect = 3e-29 Identities = 117/133 (87%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| || |||||| |||| ||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctcg 341 |||||||||||||| || || || ||||||||||||||||||||||||| ||||||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 342 ttaagcacctgtg 354 || | |||||||| Sbjct: 377 ttgatcacctgtg 365
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 133 bits (67), Expect = 5e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| || |||||| |||| ||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 |||||||||||||| || || || ||||||||||||||||||||||||| ||||||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctc 379
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 133 bits (67), Expect = 5e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 222 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 281 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 282 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacctc 340 ||||||||||||| || || || ||||||||||||| ||||||||| | ||||||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacgtcctccacctc 379
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 111 bits (56), Expect = 2e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 204 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 263 ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 69 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 10 Query: 264 tgcacctg 271 |||||||| Sbjct: 9 tgcacctg 2
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079842 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 10079843 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079902 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 10079903 tccttgagcacctg 10079916 Score = 81.8 bits (41), Expect = 1e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 215 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 274 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276906 Query: 275 caggttgtcgaagccgatgat 295 | |||||||||||||||||| Sbjct: 11276905 gacgttgtcgaagccgatgat 11276885 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11262239 Query: 279 ttgtcgaagccgatgatacggac 301 ||||||||||||||||||||||| Sbjct: 11262238 ttgtcgaagccgatgatacggac 11262216 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 11320108 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11320049 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttctt 325 ||||| ||||| ||||| || ||| | || |||||||| ||||||| Sbjct: 11320048 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctt 11320002 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccga 291 ||||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct: 11266884 aggcgatgaagctaatgcactgcacatgcctgacgttgtcaaagccga 11266837
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 666 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 665 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 606 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 605 tccttgagcacctg 592
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 512 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 511 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 452 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 451 tccttgagcacctg 438
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 513 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 512 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 453 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 452 tccttgagcacctg 439
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 515 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 514 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 455 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 454 tccttgagcacctg 441
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079727 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 10079728 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079787 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 10079788 tccttgagcacctg 10079801 Score = 81.8 bits (41), Expect = 1e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 215 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 274 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276577 Query: 275 caggttgtcgaagccgatgat 295 | |||||||||||||||||| Sbjct: 11276576 gacgttgtcgaagccgatgat 11276556 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11261910 Query: 279 ttgtcgaagccgatgatacggac 301 ||||||||||||||||||||||| Sbjct: 11261909 ttgtcgaagccgatgatacggac 11261887 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 11319779 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11319720 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttctt 325 ||||| ||||| ||||| || ||| | || |||||||| ||||||| Sbjct: 11319719 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctt 11319673 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccga 291 ||||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct: 11266555 aggcgatgaagctaatgcactgcacatgcctgacgttgtcaaagccga 11266508
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 82779 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 82778 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 82719 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 82718 tccttgagcacctg 82705
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctaacg 490 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 489 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 430 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 429 tccttgagcacctg 416
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 107 bits (54), Expect = 3e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 510 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 509 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 450 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 449 tccttgagcacctg 436
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 99.6 bits (50), Expect = 6e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||| ||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 597 gactcttcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 538 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||||| |||||||| ||| ||| | | Sbjct: 537 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 478 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 477 tccttgagcacctg 464
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||| ||||| ||| || |||||||||| |||| | ||||||||||| | | Sbjct: 560 gactcctcgcagcccgggggcttgtaggcgatgaaactgatgagctgcacctgcctgacg 501 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgaccttctccacc 338 |||||||||||||||||||||||| | || ||||||| | |||||||| ||| ||| | | Sbjct: 500 ttgtcgaagccgatgatacggacgaatgcatcagggttcgccttcttggcctcctcgagc 441 Query: 339 tcgttaagcacctg 352 || || |||||||| Sbjct: 440 tccttgagcacctg 427
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 85.7 bits (43), Expect = 9e-14 Identities = 73/83 (87%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 ||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||| Sbjct: 836 aggcgatgaagctgatgagctgcacctgcctaacgttgtcgaagccgatgatacggacga 777 Query: 304 aagcgtcagggtactccttcttg 326 | || ||||||||| |||||||| Sbjct: 776 atgcatcagggtacgccttcttg 754
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 81.8 bits (41), Expect = 1e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 215 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 274 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 528 Query: 275 caggttgtcgaagccgatgat 295 | |||||||||||||||||| Sbjct: 527 gacgttgtcgaagccgatgat 507
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 81.8 bits (41), Expect = 1e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 215 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 274 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 95148 Query: 275 caggttgtcgaagccgatgat 295 | |||||||||||||||||| Sbjct: 95149 gacgttgtcgaagccgatgat 95169 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 109815 Query: 279 ttgtcgaagccgatgatacggac 301 ||||||||||||||||||||||| Sbjct: 109816 ttgtcgaagccgatgatacggac 109838 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 51946 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 52005 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttctt 325 ||||| ||||| ||||| || ||| | || |||||||| ||||||| Sbjct: 52006 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctt 52052 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccga 291 ||||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct: 105170 aggcgatgaagctaatgcactgcacatgcctgacgttgtcaaagccga 105217
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 507 Query: 279 ttgtcgaagccgatgatacggac 301 ||||||||||||||||||||||| Sbjct: 506 ttgtcgaagccgatgatacggac 484
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 524 Query: 279 ttgtcgaagccgatgatacggac 301 ||||||||||||||||||||||| Sbjct: 523 ttgtcgaagccgatgatacggac 501
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 75.8 bits (38), Expect = 9e-11 Identities = 71/82 (86%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 522 Query: 279 ttgtcgaagccgatgatacgga 300 |||||||||||||||||||||| Sbjct: 521 ttgtcgaagccgatgatacgga 500
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||||||||| |||| |||||||||||| || |||||||||||||||||| |||| | Sbjct: 591 aggcgatgaaactgatgcactgcacctggcggttgttgtcgaagccgatgatgcggatga 532 Query: 304 aagcgtcagggtactccttcttgaccttctccacctc 340 | |||| ||||||||||||||| || ||||||||| Sbjct: 531 aggcgtgggggtactccttcttgcactcctccacctc 495
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 548 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 492
>gb|DQ286548.1| Pyrus pyrifolia ribulose-1,5-bisphosphate carboxylase small subunit-like gene, complete sequence; plastid Length = 549 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacg 302 ||||||||||||| ||||||||| || || | ||||||||| ||||||||||||||| Sbjct: 523 gcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacggacg 467
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1048 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 992
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1068 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 1012
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1719 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 1663
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 ||||||||||||||||||||||||| || || | ||||||||| ||||| || |||||| Sbjct: 574 aggcgatgaagctgacgcactgcacttgacggacgttgtcgaatccgataatgcggacga 515 Query: 304 aagc 307 |||| Sbjct: 514 aagc 511
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatga 294 ||||||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 803 aggcgatgaagctgacgcactgcgtctgcctgacgttgtcgaagccgatga 753
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 579 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 520 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttctt 325 ||||| ||||| ||||| || ||| | || |||||||| ||||||| Sbjct: 519 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctt 473
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 278 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 581 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 522 Query: 279 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttctt 325 ||||| ||||| ||||| || ||| | || |||||||| ||||||| Sbjct: 521 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctt 475
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||||||||| |||| |||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 551 aggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgatacggatga 492 Query: 304 aagcgtcagggtactccttcttg 326 | || |||||||| |||||||| Sbjct: 491 aggcctcagggtaagccttcttg 469
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 523 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 464 Query: 304 aagcgtcagggtactccttcttgaccttctccacctcg 341 || || ||||| |||||||| ||| |||||||||| Sbjct: 463 aatactcggggtaggccttcttggcctcctccacctcg 426
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 621 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 562 Query: 304 aagcgtcagggtactccttcttgaccttctccacctcg 341 || || ||||| |||||||| ||| |||||||||| Sbjct: 561 aatactcggggtaggccttcttggcctcctccacctcg 524
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 597 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 538 Query: 304 aagcgtcagggtactccttcttgaccttctccacctcg 341 || || ||||| |||||||| ||| |||||||||| Sbjct: 537 aatactcggggtaggccttcttggcctcctccacctcg 500
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 508 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 449 Query: 304 aagcgtcagggtactccttcttgaccttctccacctcg 341 || || ||||| |||||||| ||| |||||||||| Sbjct: 448 aatactcggggtaggccttcttggcctcctccacctcg 411
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 262 actgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactcct 321 |||||||||||| | |||||||||||||||||||||||| | || |||||||| ||| Sbjct: 524 actgcacctgcctgacgttgtcgaagccgatgatacggacaaaggcatcagggtaggcct 465 Query: 322 tcttg 326 ||||| Sbjct: 464 tcttg 460
>gb|U39858.1|GTU39858 Glycine tabacina ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1084 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 1063 aggcgatgaagctgatgcattgcacttggcgaacgttgtcgaatccgatgatacgga 1007
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||||||| ||||| || ||||| || |||| ||||||||| ||||||||||||| Sbjct: 2640 aggcgatgaaactgacacattgcacttgacgcacgttgtcgaatccgatgatacgga 2584
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 231 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 290 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 1153 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 1094 Query: 291 atga 294 |||| Sbjct: 1093 atga 1090
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||||||||||||| |||||| || || ||| |||||||||||||||||| Sbjct: 602 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgat 551
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||||||||||||| |||||| || || ||| |||||||||||||||||| Sbjct: 600 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgat 549
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||||||||||||| |||||| || || ||| |||||||||||||||||| Sbjct: 578 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgat 527
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 231 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 290 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 509 Query: 291 atga 294 |||| Sbjct: 508 atga 505
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 231 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 290 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 688 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 629 Query: 291 atga 294 |||| Sbjct: 628 atga 625
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 231 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 290 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 509 Query: 291 atga 294 |||| Sbjct: 508 atga 505
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgg 299 |||||||||| |||| |||||| || || |||| ||||||||| |||||||||||| Sbjct: 2033 aggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgatacgg 1978
>gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS1) mRNA, complete cds Length = 735 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 531 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 472 Query: 304 aagcgtcagggtactccttcttg 326 | || | |||||||||||||||| Sbjct: 471 atgcctgagggtactccttcttg 449
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317 Query: 304 aagcgtcagggtactccttcttg 326 | || | |||||||||||||||| Sbjct: 316 atgcctgagggtactccttcttg 294
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317 Query: 304 aagcgtcagggtactccttcttg 326 | || | |||||||||||||||| Sbjct: 316 atgcctgagggtactccttcttg 294
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317 Query: 304 aagcgtcagggtactccttcttg 326 | || | |||||||||||||||| Sbjct: 316 atgcctgagggtactccttcttg 294
>gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxylase (rbc5) gene, complete cds Length = 776 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 559 aggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgatacggatga 500 Query: 304 aagcgtcagggtactccttcttg 326 | || |||||||| |||||||| Sbjct: 499 aggcctcagggtaagccttcttg 477
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 1334 aggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgatacggatga 1275 Query: 304 aagcgtcagggtactccttcttg 326 | || |||||||| |||||||| Sbjct: 1274 aggcctcagggtaagccttcttg 1252
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 2520 aggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgatacggatga 2461 Query: 304 aagcgtcagggtactccttcttg 326 | || |||||||| |||||||| Sbjct: 2460 aggcctcagggtaagccttcttg 2438
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcg 308 ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| | || Sbjct: 371 atgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatccatgcc 312 Query: 309 tcagggtactccttcttg 326 | |||||||||||||||| Sbjct: 311 tgagggtactccttcttg 294
>gb|M38317.1|CIPRBCS3 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-3) mRNA, complete cds Length = 765 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 542 aggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgatacggatga 483 Query: 304 aagcgtcagggtactccttctt 325 | || |||||||| ||||||| Sbjct: 482 aggcctcagggtaagccttctt 461
>emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisphosphate carboxylase small subunit Length = 1601 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||||||||||||| ||||||||| || || | |||||| || || |||||||||| Sbjct: 1285 aggcgatgaagctgatgcactgcacttggcgaacgttgtcaaatccaatgatacgga 1229
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 50.1 bits (25), Expect = 0.005 Identities = 76/93 (81%) Strand = Plus / Minus Query: 234 ggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatg 293 |||||| ||||||| ||||| |||| ||||||||| || || | ||||||||| || || Sbjct: 576 ggtggcttgaaggcaatgaaactgatgcactgcacttgacggacgttgtcgaatccaata 517 Query: 294 atacggacgtaagcgtcagggtactccttcttg 326 || |||| ||| || | ||||||||||||||| Sbjct: 516 attcggatgtatgcatttgggtactccttcttg 484
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Minus Query: 251 gaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 |||||||| ||||||||| || ||| |||||||||||||||||| Sbjct: 550 gaagctgatgcactgcacttggcgcgtgttgtcgaagccgatgat 506
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggac 301 |||||||| |||| ||||||||| || || | |||||||| |||||||||||||| Sbjct: 1107 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 1052
>emb|X05986.1|LERBCS3C Tomato rbcS3C gene for ribulose 1,5-biphosp[hate carboxylase/oxygenase small subunit Length = 1341 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggac 301 |||||||| |||| ||||||||| || || | |||||||| |||||||||||||| Sbjct: 997 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 942
>emb|X05985.1|LERBCS3B Tomato rbcS3B gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 1054 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggac 301 |||||||| |||| ||||||||| || || | |||||||| |||||||||||||| Sbjct: 975 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 920
>emb|X05984.1|LERBCS3A Tomato rbcS3A gene for ribulose 1,5-bisphosphate carboxylae/oxygenase small subunit Length = 1520 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggac 301 |||||||| |||| ||||||||| || || | |||||||| |||||||||||||| Sbjct: 1077 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 1022
>emb|X69762.1|STRBCS2C S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit Length = 1386 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||| |||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1120 atgaaactgatgcactgcacttgacgaacgttgtcgaatccgatgatacgga 1069
>emb|X69761.1|STRBCS2B S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit Length = 1703 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||| |||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1421 atgaaactgatgcactgcacttgacgaacgttgtcgaatccgatgatacgga 1370
>emb|X69760.1|STRBCS2 S.tuberosum rbcS2 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit Length = 1629 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 ||||| |||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1321 atgaaactgatgcactgcacttgacgaacgttgtcgaatccgatgatacgga 1270
>gb|M13544.1|TOMRBCSC Tomato (L.esculentum) ribulose-1,5-bisphosphate carboxylase/oxygenase (RBCS) small subunit gene, clone Rbcs-3A Length = 1027 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggac 301 |||||||| |||| ||||||||| || || | |||||||| |||||||||||||| Sbjct: 835 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 780
>dbj|D11112.1|TOMRBCO Tomato ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 4124 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggac 301 |||||||| |||| ||||||||| || || | |||||||| |||||||||||||| Sbjct: 4045 gcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgatacggac 3990
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 46.1 bits (23), Expect = 0.081 Identities = 68/83 (81%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||| ||||| |||||||| ||||| || || | |||||| || ||||||||||||| Sbjct: 555 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 496 Query: 304 aagcgtcagggtactccttcttg 326 | || | |||||||||||||||| Sbjct: 495 atgcctgagggtactccttcttg 473
>gb|AF044397.1|AF044397 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R3 (rbcS-R3) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 68/83 (81%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||| ||||| |||| ||||||||| || || | |||||| || ||||||||||||| Sbjct: 382 aggcaatgaaactgatgcactgcacttgacggacgttgtcaaatccgatgatacggatcc 323 Query: 304 aagcgtcagggtactccttcttg 326 | || | |||||||||||||||| Sbjct: 322 atgcctgagggtactccttcttg 300
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 46.1 bits (23), Expect = 0.081 Identities = 47/55 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||||| |||| ||||||||| || || | |||||||| ||||||||||||| Sbjct: 575 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacgga 521
>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence Length = 152251 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 49 agaatttacatatgcatatatgc 71 ||||||||||||||||||||||| Sbjct: 124176 agaatttacatatgcatatatgc 124198
>emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit Length = 2034 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 1925 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 1879
>emb|AJ419826.1|CAR419826 Coffea arabica mRNA for rubisco small subunit (rbcs1 gene) Length = 934 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 571 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 525
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 46.1 bits (23), Expect = 0.081 Identities = 68/83 (81%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 303 |||| ||||| |||||||| ||||| || || | |||||| || ||||||||||||| Sbjct: 527 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 468 Query: 304 aagcgtcagggtactccttcttg 326 | || | |||||||||||||||| Sbjct: 467 atgcctgagggtactccttcttg 445
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 46.1 bits (23), Expect = 0.081 Identities = 47/55 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||||| |||| ||||||||| || || | |||||||| ||||||||||||| Sbjct: 579 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacgga 525
>dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-F10, full insert sequence Length = 418 Score = 46.1 bits (23), Expect = 0.081 Identities = 47/55 (85%) Strand = Plus / Minus Query: 219 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgcc 273 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| Sbjct: 61 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcc 7
>gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 295 ||||| |||| |||||||||||| || | ||||||||| |||||||| Sbjct: 568 atgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 46.1 bits (23), Expect = 0.081 Identities = 47/55 (85%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||||| |||| ||||||||| || || | |||||||| ||||||||||||| Sbjct: 543 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacgga 489
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Minus Query: 234 ggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatg 293 |||||| || |||| ||||| |||| |||||| || || || | |||||||||||||||| Sbjct: 560 ggtggcttggaggcaatgaaactgatgcactggacttggcgaacgttgtcgaagccgatg 501 Query: 294 at 295 || Sbjct: 500 at 499
>gb|AF294982.1| Binary vector pINDEX3, complete sequence Length = 12942 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 3356 gttgtcgaaaccgatgatacggacgaaagc 3327
>gb|AF294981.1| Binary vector pINDEX4, complete sequence Length = 12072 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 2486 gttgtcgaaaccgatgatacggacgaaagc 2457
>gb|AF294980.1| Binary vector pINDEX2, complete sequence Length = 14230 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 4644 gttgtcgaaaccgatgatacggacgaaagc 4615
>gb|AF294979.1| Binary vector pINDEX1, complete sequence Length = 14203 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 4617 gttgtcgaaaccgatgatacggacgaaagc 4588
>gb|AF330636.1|AF330636 Plant DNA excision vector pX6-GFP, complete sequence Length = 14103 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 6869 gttgtcgaaaccgatgatacggacgaaagc 6840
>gb|AF309825.2|AF309825 Plant expression vector pER8, complete plasmid sequence Length = 11522 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 4288 gttgtcgaaaccgatgatacggacgaaagc 4259
>emb|X04333.1|PSRBCS3A Pea rbcS-3A gene for ribulose 1.5-bisphosphate carboxylase (RBC) small subunit Length = 2061 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 1478 gttgtcgaaaccgatgatacggacgaaagc 1449
>dbj|AB086434.1| Synthetic construct gene trap vector yy323, complete sequence Length = 10212 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 2156 gttgtcgaaaccgatgatacggacgaaagc 2127
>dbj|AB086433.1| Synthetic construct gene trap vector yy322, complete sequence Length = 10856 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggacgtaagc 307 ||||||||| ||||||||||||||| |||| Sbjct: 2156 gttgtcgaaaccgatgatacggacgaaagc 2127
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 44.1 bits (22), Expect = 0.32 Identities = 64/78 (82%) Strand = Plus / Minus Query: 249 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcg 308 ||||| |||| ||| ||||| || || | ||||||||| ||||||||||||| | || Sbjct: 515 atgaaactgatgcattgcacttgacggacgttgtcgaatccgatgatacggatccatgcc 456 Query: 309 tcagggtactccttcttg 326 | |||||||||||||||| Sbjct: 455 tgagggtactccttcttg 438
>ref|XM_473688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1155 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 caggttgtcgaagccgatgat 295 ||||||||||||||||||||| Sbjct: 369 caggttgtcgaagccgatgat 349
>gb|AY487801.1| Capsicum annuum Cristal-Glass1 protein mRNA, complete cds Length = 769 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||||||| |||| |||||||| || || | |||||| || ||||||||||||| Sbjct: 561 aggcgatgaaactgatacactgcacttgacgaacgttgtcaaatccgatgatacgga 505
>gb|AY382881.1| Spirodela polyrrhiza strain P143 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, partial cds; nuclear gene for chloroplast product Length = 345 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcac 268 ||||||||||||||| ||||||||| Sbjct: 39 aggcgatgaagctgatgcactgcac 15
>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16, complete sequence Length = 133113 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 caggttgtcgaagccgatgat 295 ||||||||||||||||||||| Sbjct: 32013 caggttgtcgaagccgatgat 31993
>gb|AF326774.1|AF326774 Larrea tridentata ribulose 1,5-bisphosphate carboxylase small subunit mRNA, partial cds Length = 322 Score = 42.1 bits (21), Expect = 1.3 Identities = 63/76 (82%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 279 ttgtcgaagccgatgata--cggacgtaagcgtcagggtactccttcttgaccttctcca 336 |||||||||||||||||| |||| | |||| || ||||| |||||||| ||| ||| | Sbjct: 322 ttgtcgaagccgatgatatccggatgaaagcatcggggtaagccttcttggcctcctcga 263 Query: 337 cctcgttaagcacctg 352 |||||| |||||||| Sbjct: 262 gctcgttcagcacctg 247
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 caggttgtcgaagccgatgat 295 ||||||||||||||||||||| Sbjct: 29644793 caggttgtcgaagccgatgat 29644773
>dbj|AB208643.1| Fragaria x ananassa FrRuBisCO19 pseudogene mRNA for RuBisCO small subunit Length = 306 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||||||| |||| |||||| || || || | |||||||| ||||||||||||| Sbjct: 197 aggcgatgaaactgatgcactgaacttgacggacattgtcgaatccgatgatacgga 141
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 cgcaggttgtcgaagccgatg 293 ||||||||||||||||||||| Sbjct: 2865301 cgcaggttgtcgaagccgatg 2865281
>dbj|AK060241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F02, full insert sequence Length = 1599 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 caggttgtcgaagccgatgat 295 ||||||||||||||||||||| Sbjct: 620 caggttgtcgaagccgatgat 600
>gb|AF065615.1|AF065615 Capsicum annuum ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 244 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 300 |||||||||| |||| |||||||| || || | |||||| || ||||||||||||| Sbjct: 582 aggcgatgaaactgatacactgcacttgacgaacgttgtcaaatccgatgatacgga 526
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 42.1 bits (21), Expect = 1.3 Identities = 66/81 (81%) Strand = Plus / Minus Query: 246 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaa 305 |||||||| |||| |||||| || || || | |||||| || ||||||||||||| | Sbjct: 547 gcgatgaaactgatgcactgaacttgacgaacgttgtcaaatccgatgatacggatccat 488 Query: 306 gcgtcagggtactccttcttg 326 || | |||||||||||||||| Sbjct: 487 gcctgagggtactccttcttg 467
>emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chromosome 4, complete sequence Length = 70508 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 aatttacatatgcatatatgc 71 ||||||||||||||||||||| Sbjct: 46373 aatttacatatgcatatatgc 46393
>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete sequence Length = 228428 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gaatttacatatgcatatatg 70 ||||||||||||||||||||| Sbjct: 158744 gaatttacatatgcatatatg 158764
>ref|NM_104705.2| Arabidopsis thaliana ATTPS10; transferase, transferring glycosyl groups / trehalose-phosphatase AT1G60140 (ATTPS10) mRNA, complete cds Length = 3101 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 caaaagtgaagttcacaaaa 166 |||||||||||||||||||| Sbjct: 125 caaaagtgaagttcacaaaa 106
>ref|XM_521635.1| PREDICTED: Pan troglodytes similar to multiple coiled-coil GABABR1-binding protein (LOC466234), mRNA Length = 4410 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tcttgaccttctccacctcg 341 |||||||||||||||||||| Sbjct: 1198 tcttgaccttctccacctcg 1179
>gb|AC092198.5| Homo sapiens chromosome X clone XXbac-10326 map p11.4, complete sequence Length = 158456 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 tctccacctcgttaagcacctgtg 354 |||| ||||||||||||||||||| Sbjct: 114381 tctcaacctcgttaagcacctgtg 114358
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atttacatatgcatatatgc 71 |||||||||||||||||||| Sbjct: 85767 atttacatatgcatatatgc 85748
>ref|XM_845494.1| PREDICTED: Canis familiaris similar to tripartite motif protein 24 (LOC608463), partial mRNA Length = 267 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 agtgaagttcacaaaagacc 170 |||||||||||||||||||| Sbjct: 215 agtgaagttcacaaaagacc 234
>ref|XM_843482.1| PREDICTED: Canis familiaris similar to tripartite motif protein 24 (LOC606986), partial mRNA Length = 267 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 agtgaagttcacaaaagacc 170 |||||||||||||||||||| Sbjct: 215 agtgaagttcacaaaagacc 234
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atttacatatgcatatatgc 71 |||||||||||||||||||| Sbjct: 152904 atttacatatgcatatatgc 152885
>ref|XM_847054.1| PREDICTED: Canis familiaris similar to Transcription intermediary factor 1-alpha (TIF1-alpha) (Tripartite motif protein 24) (RING finger protein 82) (LOC609728), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 agtgaagttcacaaaagacc 170 |||||||||||||||||||| Sbjct: 585 agtgaagttcacaaaagacc 604
>ref|XM_719558.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04366) partial mRNA Length = 849 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atatattataaatatgcaca 20 |||||||||||||||||||| Sbjct: 796 atatattataaatatgcaca 777
>gb|AC139748.12| Medicago truncatula clone mth2-15o24, complete sequence Length = 144217 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 tcctcgcaacccggtggcct 241 |||||||||||||||||||| Sbjct: 57925 tcctcgcaacccggtggcct 57944
>emb|BX950853.16| Zebrafish DNA sequence from clone DKEY-25L21 in linkage group 17, complete sequence Length = 214513 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tattataaatatgcacacag 23 |||||||||||||||||||| Sbjct: 191789 tattataaatatgcacacag 191770
>emb|AL512622.9| Human DNA sequence from clone RP11-140A10 on chromosome 10 Contains the 3' end of the gene for protein kinase (PKE), the 3' end of a novel gene, possible ortholog of mouse RIKEN cDNA 6330417G02 gene, a novel gene (LOC282973), the DPYSL4 gene for dihydropyrimidinase-like 4 (CRMP3, DRP-4, ULIP4), a novel gene and five CpG islands, complete sequence Length = 145630 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 tcttgaccttctccacctcg 341 |||||||||||||||||||| Sbjct: 4437 tcttgaccttctccacctcg 4418
>gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosphate carboxylase small subunit gene, complete cds; nuclear gene for chloroplast product Length = 2662 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggac 301 ||||||||| |||||||||||||| Sbjct: 1664 gttgtcgaatccgatgatacggac 1641
>emb|CR788312.9| Zebrafish DNA sequence from clone DKEY-192D9, complete sequence Length = 177966 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atatattataaatatgcaca 20 |||||||||||||||||||| Sbjct: 115692 atatattataaatatgcaca 115711
>emb|AL672217.6| Zebrafish DNA sequence from clone BUSM1-72B14 Contains the gdf8 gene for growth differentiation factor 8, a novel gene similar to PSML1 (postmeiotic segregation increased 1-like protein), two novel genes, the 3' part of a novel gene, a novel glycoprotease, a novel gene and two CpG islands, complete sequence Length = 117322 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 acaggtgttgtatatgtgta 39 |||||||||||||||||||| Sbjct: 83381 acaggtgttgtatatgtgta 83400
>emb|CR318584.8| Zebrafish DNA sequence from clone CH211-123F21 in linkage group 13, complete sequence Length = 138029 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 acaggtgttgtatatgtgta 39 |||||||||||||||||||| Sbjct: 119128 acaggtgttgtatatgtgta 119147
>emb|CR382380.5| Zebrafish DNA sequence from clone DKEY-112M3 in linkage group 14, complete sequence Length = 84200 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 atcatagagaagaaaattat 119 |||||||||||||||||||| Sbjct: 30579 atcatagagaagaaaattat 30560
>ref|NM_004543.2| Homo sapiens nebulin (NEB), mRNA Length = 20839 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttcttgaccttctccacctc 340 |||||||||||||||||||| Sbjct: 4783 ttcttgaccttctccacctc 4764
>gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, complete sequence Length = 173729 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 tacatatgcatatatgctccacaa 78 ||||||||||||||| |||||||| Sbjct: 56450 tacatatgcatatattctccacaa 56427
>gb|AC102411.12| Mus musculus chromosome 18, clone RP24-374D7, complete sequence Length = 171918 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atatattataaatatgcaca 20 |||||||||||||||||||| Sbjct: 45222 atatattataaatatgcaca 45241
>emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in linkage group 14, complete sequence Length = 181055 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 ttacatatgcatatatgctc 73 |||||||||||||||||||| Sbjct: 42670 ttacatatgcatatatgctc 42651
>gb|AC107052.4| Homo sapiens BAC clone RP11-346A19 from 2, complete sequence Length = 177987 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ttcttgaccttctccacctc 340 |||||||||||||||||||| Sbjct: 64643 ttcttgaccttctccacctc 64662
>gb|AF238281.1| Arabidopsis thaliana trehalose-6-phosphate synthase 3 gene, promoter region Length = 1943 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 caaaagtgaagttcacaaaa 166 |||||||||||||||||||| Sbjct: 1290 caaaagtgaagttcacaaaa 1271
>emb|AL954387.17| Zebrafish DNA sequence from clone CH211-288B20 in linkage group 18, complete sequence Length = 125744 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tattataaatatgcacacag 23 |||||||||||||||||||| Sbjct: 88318 tattataaatatgcacacag 88337 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tattataaatatgcacacag 23 |||||||||||||||||||| Sbjct: 61705 tattataaatatgcacacag 61686
>gb|AF173667.1|AF173667 Beta vulgaris clone RUB109UNI ribulose bisphosphate carboxylase, small subunit (RbcS) gene, partial sequence Length = 767 Score = 40.1 bits (20), Expect = 5.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 304 aagcgtcagggtactccttcttgaccttctccacctcgtt 343 |||| |||||||| |||||||||||| ||| |||||||| Sbjct: 68 aagcatcagggtaagccttcttgacctcctcaacctcgtt 107
>emb|CR388087.28| Zebrafish DNA sequence from clone DKEY-19N7 in linkage group 22, complete sequence Length = 210107 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tattataaatatgcacacag 23 |||||||||||||||||||| Sbjct: 117495 tattataaatatgcacacag 117514
>emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13, complete sequence Length = 121251 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 acaggtgttgtatatgtgta 39 |||||||||||||||||||| Sbjct: 6541 acaggtgttgtatatgtgta 6560
>emb|BX293547.6| Zebrafish DNA sequence from clone CH211-142E24 in linkage group 20, complete sequence Length = 157145 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tattataaatatgcacacag 23 |||||||||||||||||||| Sbjct: 48301 tattataaatatgcacacag 48320
>gb|AC161481.4| Mus musculus chromosome 18, clone RP23-336C20, complete sequence Length = 210643 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atatattataaatatgcaca 20 |||||||||||||||||||| Sbjct: 64823 atatattataaatatgcaca 64804
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 ctccttcttgaccttctccacctc 340 ||||||||||| |||||||||||| Sbjct: 859500 ctccttcttgaacttctccacctc 859477
>emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, complete sequence Length = 186487 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tattataaatatgcacacag 23 |||||||||||||||||||| Sbjct: 162850 tattataaatatgcacacag 162869
>gb|AC004473.1|T13D8 Arabidopsis thaliana chromosome 1 BAC T13D8, complete sequence Length = 116177 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 caaaagtgaagttcacaaaa 166 |||||||||||||||||||| Sbjct: 20673 caaaagtgaagttcacaaaa 20692
>emb|AL928800.5| Zebrafish DNA sequence from clone CH211-233G21 in linkage group 1, complete sequence Length = 153880 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tattataaatatgcacacag 23 |||||||||||||||||||| Sbjct: 126749 tattataaatatgcacacag 126768
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcctgaaggcgatgaagctg 257 |||||||||||||||||||| Sbjct: 2694162 gcctgaaggcgatgaagctg 2694143
>gb|U35636.1|HSNEBUL1 Human nebulin mRNA, partial cds Length = 7420 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttcttgaccttctccacctc 340 |||||||||||||||||||| Sbjct: 3550 ttcttgaccttctccacctc 3531
>emb|X96847.1|MSRBCSK1A M.sativa Rbcsk-1A gene Length = 3180 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gttgtcgaagccgatgatacggac 301 ||||||||| |||||||||||||| Sbjct: 2710 gttgtcgaatccgatgatacggac 2687
>emb|X58122.1|HSNBLNP Human mRNA for nebulin (partial) Length = 1677 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttcttgaccttctccacctc 340 |||||||||||||||||||| Sbjct: 185 ttcttgaccttctccacctc 166
>emb|X83957.1|HSRNANEB H.sapiens mRNA for nebulin Length = 20881 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttcttgaccttctccacctc 340 |||||||||||||||||||| Sbjct: 4825 ttcttgaccttctccacctc 4806
>gb|AY581775.1| Uncultured bacterium clone hvf3273_cl0_sn3 60 kDa chaperonin (cpn60) gene, partial cds Length = 558 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ctccttcttgaccttctcca 336 |||||||||||||||||||| Sbjct: 246 ctccttcttgaccttctcca 227 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,329,297 Number of Sequences: 3902068 Number of extensions: 3329297 Number of successful extensions: 74619 Number of sequences better than 10.0: 222 Number of HSP's better than 10.0 without gapping: 220 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 74237 Number of HSP's gapped (non-prelim): 362 length of query: 377 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 355 effective length of database: 17,147,199,772 effective search space: 6087255919060 effective search space used: 6087255919060 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
