>CRD1_HORVU (Q5EFU4) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Protein Xantha-l)
          Length = 417

 Score =  117 bits (293), Expect = 7e-27
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -1

Query: 342 VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 163
           VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 358 VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 417

>CRD1_GOSHI (Q6SJV8) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 43/60 (71%), Positives = 56/60 (93%)
 Frame = -1

Query: 342 VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 163
           V+IN +++++GE++D+PLVKNLKR+PLIA L SE++A YLMPPIESGSVDFAEFEP+LVY
Sbjct: 346 VEINEQLLAVGETSDIPLVKNLKRIPLIAALASELLATYLMPPIESGSVDFAEFEPQLVY 405

>CRD1_EUPES (Q945B7) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 405

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = -1

Query: 342 VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 163
           V IN K+ ++GE+ D  +VKNLKRVPLIA LVSEI+AAYLMPPIESGSVDFAEFEPKLVY
Sbjct: 346 VVINQKLQAVGETEDNSVVKNLKRVPLIAALVSEILAAYLMPPIESGSVDFAEFEPKLVY 405

>CRD1_ARATH (Q9M591) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase) (Copper response defect 1 protein)
           (Dicarboxylate diiron protein) (AtZIP
          Length = 409

 Score = 84.3 bits (207), Expect = 7e-17
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = -1

Query: 327 KIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 163
           K+++IGE++D   +K LKR+PL+  L SEI+AAYLMPP+ESGSVDFAEFEP LVY
Sbjct: 355 KLLAIGETDDASFIKTLKRIPLVTSLASEILAAYLMPPVESGSVDFAEFEPNLVY 409

>CTH1_CHLRE (Q9AR22) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 2, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           2) (Copper target homolog 1 protein)
          Length = 407

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 19/60 (31%), Positives = 35/60 (58%)
 Frame = -1

Query: 342 VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFAEFEPKLVY 163
           V  N ++++IG  N    +K + + P++ ++V+E+   ++M P ESGS D    +  LVY
Sbjct: 348 VKYNAQLVNIGSMNLPSPIKAIMKAPILERMVAEVFQVFIMTPKESGSYDLDANKTALVY 407

>ACSF_PORPU (P51277) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl
           ester oxidative cyclase)
          Length = 349

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 333 NLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSV 196
           N  +I I +    PLVK   + PL   L+  +I  YL+ PI+S +V
Sbjct: 299 NRALIDIDKKGSQPLVKTFMKAPLYMSLILNLIKIYLIKPIDSQAV 344

>ACSF1_ANASP (Q8YX57) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX
           monomethyl ester oxidative cyclase 1)
          Length = 351

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -1

Query: 333 NLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIES 205
           NL I  I  S+    VK ++++PLIA +V  ++  YL+ PI++
Sbjct: 301 NLNISEIERSSQPKFVKLIRKLPLIAAIVWNLLMVYLIKPIDT 343

>CRD1_CHLRE (Q9LD46) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 1, chloroplast precursor (EC 1.14.13.81)
           (Mg-protoporphyrin IX monomethyl ester oxidative cyclase
           1) (Copper response defect 1 protein) (Copper-response
           target 1 protein
          Length = 407

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -1

Query: 342 VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFA 187
           VD+N K++ +  S+  PL   L+++PL+ ++ S  +        + GSVD A
Sbjct: 348 VDVNAKLVELSASSS-PLA-GLQKLPLLERMASYCLQLLFFKEKDVGSVDIA 397

>KCNG1_HUMAN (Q9UIX4) Potassium voltage-gated channel subfamily G member 1|
           (Voltage-gated potassium channel subunit Kv6.1) (kH2)
          Length = 513

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 319 FYRRVQRLAPGEEPEEG 269
           FYRR QRL P +EP +G
Sbjct: 39  FYRRAQRLRPQDEPRQG 55

>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
           precursor (LTBP-3)
          Length = 1268

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 157 LSKKDSSLPIFTNIMMHHAPRESLNEHRVHG*LT*STSSCAHL 29
           +S +  + P   N+ +HH P  S+  HR+ G      +S  HL
Sbjct: 214 ISAEVQAPPPVVNVRVHHPPEASVQVHRIEGPNAEGPASSQHL 256

>GRIPE_MOUSE (Q6GYP7) GTPase-activating RapGAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2035

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 120 FVKIGRDESFFDKFSRQAWAQIRQNQRSQTRLGA*GTQR 236
           F K+  D+SF   +SR    Q    QRS T  G+ GT++
Sbjct: 706 FQKVSVDKSFSRGWSRDQPGQAPMRQRSATTTGSPGTEK 744

>GRIPE_HUMAN (Q6GYQ0) GTPase-activating Rap/Ran-GAP domain-like 1|
           (GAP-related-interacting partner to E12) (GRIPE)
           (Tuberin-like protein 1)
          Length = 2036

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 120 FVKIGRDESFFDKFSRQAWAQIRQNQRSQTRLGA*GTQR 236
           F K+  D+SF   +SR    Q    QRS T  G+ GT++
Sbjct: 707 FQKVSVDKSFSRGWSRDQPGQAPMRQRSATTTGSPGTEK 745

>ACSF3_ANASP (Q8YRZ2) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 3 (EC 1.14.13.81) (Mg-protoporphyrin IX
           monomethyl ester oxidative cyclase 3)
          Length = 358

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = -1

Query: 342 VDINLKIISIGESNDLPLVKNLKRVPLIAQLVSEIIAAYLMPPIESGSVDFA 187
           V+ + K+ +I  SN    ++  +++P++A    +++  YLM PI++ S   A
Sbjct: 305 VENSEKLSAIASSNTPKFLQFFQKLPVLASTGWQLLRLYLMKPIDAVSAQGA 356

>DNAK_PSESM (Q87WP0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 638

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 321 ISIGESNDLPLVKNLKRVPLIAQLVSE 241
           I IG+ ND+ LV    R+PL+ +LV+E
Sbjct: 329 IDIGKINDVILVGGQTRMPLVQKLVTE 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,929,063
Number of Sequences: 219361
Number of extensions: 751126
Number of successful extensions: 1712
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)