>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)|
            (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score =  100 bits (250), Expect = 2e-21
 Identities = 58/123 (47%), Positives = 80/123 (65%), Gaps = 3/123 (2%)
 Frame = -2

Query: 594  DAAEATLSEGKPFCVAHVDVGLDTTAVREAVVKAMNRFKSLPIMVFSTDEASNKAVIYAG 415
            +AAE+  S+GK FC+  +DVGLD  AVREAV K M + K + IMVFSTDE++NKAV+ AG
Sbjct: 883  EAAESAASDGKTFCIIQLDVGLDAAAVREAVSKVMEK-KGMSIMVFSTDESTNKAVVCAG 941

Query: 414  VPPDAPNGFKVLD---WLTPSIAPXXXXXXXXXXXXXXXXGSDASRVKEAMELATQIASM 244
            V P+  + FK LD   WLT ++ P                G+DAS+V+ A+++A+  ASM
Sbjct: 942  V-PEKSDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASM 1000

Query: 243  KLS 235
            KL+
Sbjct: 1001 KLN 1003

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
 Frame = -1

Query: 421 CRRTSGCTQWLQGVGLAYTFNRTTQGKRRRRQEWSCPGP-------GK*CFSGQGGNGAC 263
           C  +SG     +G G   + +R  Q  RRR Q  SC G        G  C    GG+G C
Sbjct: 52  CGSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111

Query: 262 Y 260
           +
Sbjct: 112 H 112

>PRIM_CHLPN (Q9Z6W4) DNA primase (EC 2.7.7.-)|
          Length = 590

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = -2

Query: 576 LSEGKPFCVAHVDVGLDTT------AVREAVVKAMNRFKSLPI-MVFSTDEASNKAVIYA 418
           L EG+  C+  +D G + T      A  E  VK +++   L + ++F +DEA NKA +  
Sbjct: 257 LVEGQADCLQMIDSGFNCTVAAQGTAFTEEHVKELSKLGVLKVFLLFDSDEAGNKAALRV 316

Query: 417 G 415
           G
Sbjct: 317 G 317

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -1

Query: 217 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSXVYQME 38
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 384 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 440

Query: 37  CYI*R 23
           C+I R
Sbjct: 441 CHILR 445

>AMPO_HUMAN (Q8N6M6) Aminopeptidase O (EC 3.4.11.-) (AP-O)|
          Length = 819

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
 Frame = -3

Query: 584 KLLFPKENPSVLLMSTWV--------LIPLLSGKQLSKP*TVLRVCR*WYSAQMRHQTRL 429
           + LFP + P V  MSTW          + L+SG+  +KP  +   C  WY          
Sbjct: 279 RALFPCQEPPVA-MSTWQATVRAAASFVVLMSGENSAKPTQLWEECSSWY--------YY 329

Query: 428 LYMPAYLRMHPMASRCWIGLHLQSHHSRE 342
           + MP       +A  CW  + +++  S +
Sbjct: 330 VTMPMPASTFTIAVGCWTEMKMETWSSND 358

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (Ca(v)3.3)
          Length = 2223

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -1

Query: 217 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSXVYQME 38
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 386 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 442

Query: 37  CYI*R 23
           C+I R
Sbjct: 443 CHILR 447

>PCSK6_HUMAN (P29122) Proprotein convertase subtilisin/kexin type 6 precursor|
           (EC 3.4.21.-) (Paired basic amino acid cleaving enzyme
           4) (Subtilisin/kexin-like protease PACE4)
           (Subtilisin-like proprotein convertase 4) (SPC4)
          Length = 969

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = -1

Query: 601 CHRCCRSYSFRRKTLLCCSCRRGS*YHCCPGSSCQSHEPF*EFADNGIQHR*GIKQGCYI 422
           CH+ C + S R  T  C SCRRG  YH    ++C +  P   +AD   ++       C  
Sbjct: 749 CHKGCETCSSRAATQ-CLSCRRGF-YHHQEMNTCVTLCPAGFYADESQKNCLKCHPSCKK 806

Query: 421 C-RRTSGCTQWLQGVGLA 371
           C      CT   +G  LA
Sbjct: 807 CVDEPEKCTVCKEGFSLA 824

>GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphodiesterase 2|
           precursor (EC 3.1.4.46)
          Length = 759

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -2

Query: 600 VIDAAEATLSEGKPFCVAHVDVGLDTTAVREAVVKAMNRFKSLP 469
           VID +    S+G PFC++ +D+G  TT    ++    NR  ++P
Sbjct: 390 VIDCSVQLSSDGTPFCLSSIDLGNSTTV---SLTAFRNRSTTVP 430

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 25/112 (22%), Positives = 37/112 (33%), Gaps = 1/112 (0%)
 Frame = +2

Query: 263 ASSIASLTREASXXXXXXXXXXXXXXXXXSGAIEGVSQSNTLKPLGASGGTPAYITALFD 442
           A++ A+ T  A+                 +    G   S +    GAS  TP+  TA   
Sbjct: 296 ATTTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGASTSTPSASTATSA 355

Query: 443 ASSVLNTIIGKLLKRFMALTTA-SRTAVVSRPTST*ATQKGFPSERVASAAS 595
             +  +T            + A S  +    PTST  T    PSE   +  S
Sbjct: 356 TPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTS 407

>DHSD_MOUSE (Q9CXV1) Succinate dehydrogenase [ubiquinone] cytochrome b small|
           subunit, mitochondrial precursor (CybS)
           (Succinate-ubiquinone reductase membrane anchor subunit)
           (QPs3) (CII-4) (Succinate dehydrogenase complex subunit
           D) (Succinate-ubiquinone
          Length = 159

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 434 RLLYMPAYLRMHPMASRCWIG-LHLQ-SHHSREEEAAARMVLPRAREVMLLG 285
           R  Y+ A+L+  P   RC    +HL  SHHS  + A+      R   V+LLG
Sbjct: 27  RPAYVSAFLQDQPTQGRCGTQHIHLSPSHHSGSKAASLHWTSERVVSVLLLG 78

>K0286_MOUSE (Q6ZQE4) Protein KIAA0286|
          Length = 437

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -1

Query: 322 WSCPGPGK*CFSGQGGNGACYPDSFDEAELIC*DWSSYILSGCLMVVLTLLSQIVMREHK 143
           WS  GPG  C+   GG GA               W   +++GC++     ++ ++++E +
Sbjct: 10  WSAVGPGPRCWGAGGGGGA--------------TWLLLVVAGCVVCGSADVNVVMLQESQ 55

Query: 142 I 140
           +
Sbjct: 56  V 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,681,854
Number of Sequences: 219361
Number of extensions: 1874001
Number of successful extensions: 4580
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4576
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)