Clone Name | rbah62j05 |
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Clone Library Name | barley_pub |
>FCGR1_MOUSE (P26151) High affinity immunoglobulin gamma Fc receptor I precursor| (Fc-gamma RI) (FcRI) (IgG Fc receptor I) Length = 404 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = -3 Query: 277 HIKHSSKERRTRFVREASTELKKVSIRAPMAALQEVRTGTLTKLWFHVL-----SIMHQI 113 HI + +E + E +TE V R+P LQ + + +WFH+L IM + Sbjct: 255 HIARAEREDAGFYWCEVATEDSSVLKRSPELELQVLGPQSSAPVWFHILFYLSVGIMFSL 314 Query: 112 QTSL 101 T L Sbjct: 315 NTVL 318
>SPT6H_BRARE (Q8UVK2) Transcription elongation factor SPT6 (Protein pandora)| Length = 1726 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 320 QDSEDHRRKDLLPTPYQTFLEGEENEVRERSVDGAQEG 207 + E+ KDL P Q F+E +E E E + D + G Sbjct: 11 ESEEEFEEKDLKPKKTQRFMEEDEEEEEENTEDQDEHG 48
>PPK_VIBCH (Q9KU07) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 701 Score = 28.5 bits (62), Expect = 4.3 Identities = 22/75 (29%), Positives = 35/75 (46%) Frame = -3 Query: 283 LLHIKHSSKERRTRFVREASTELKKVSIRAPMAALQEVRTGTLTKLWFHVLSIMHQIQTS 104 LLH + S E T VR+AS + K VSI+ + R +KL ++ +H + Sbjct: 340 LLHYPYHSFEHMTELVRQASFDPKVVSIK-----INIYRVAKDSKLMNSLVDAVHNGKRV 394 Query: 103 LCRL*ASHRFADETN 59 + + RF +E N Sbjct: 395 VVVVELQARFDEEAN 409
>SL9A1_CRIGR (P48761) Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1)| (NHE-1) (Solute carrier family 9 member 1) Length = 822 Score = 28.1 bits (61), Expect = 5.6 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = -3 Query: 280 LHIKHSSKERRTRFVREASTELKKVSIRAPMAALQEVRTGTLTKLWFHVLSIMHQIQTSL 101 LHI+H +K R F ++ + +R P + L K+ FHV+ + I Sbjct: 80 LHIEHGAKTLRKAF---PVLDIDYLHVRTPFEISLWILLACLMKIGFHVIPTISSIVPES 136 Query: 100 CRL 92 C L Sbjct: 137 CLL 139
>R1AB_PEDV7 (Q91AV2) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown protein 1; 3C-like Length = 6781 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/60 (28%), Positives = 29/60 (48%) Frame = -3 Query: 274 IKHSSKERRTRFVREASTELKKVSIRAPMAALQEVRTGTLTKLWFHVLSIMHQIQTSLCR 95 ++H+ ++ F REAST+ +K+ A AA Q + V+S MH + + R Sbjct: 3700 LRHAMNVAKSEFDREASTQ-RKLDRMAEQAAAQMYKEARAVNRKSKVVSAMHSLLFGMLR 3758
>GATA6_ARATH (Q6DBP8) GATA transcription factor 6 (AtGATA-6)| Length = 303 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/42 (23%), Positives = 23/42 (54%) Frame = +2 Query: 143 PQFSQCACTNFLESCHGRSDRHLLELRRRFSHEPRSPLLRGM 268 P++ + F+ + H S R ++E+RR+ + S ++R + Sbjct: 258 PEYRPASSPTFIPAVHSNSHRKIIEMRRKDDEQFDSSMIRAV 299
>JIP2_HUMAN (Q13387) C-jun-amino-terminal kinase-interacting protein 2| (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase scaffold protein 2) (Islet-brain-2) (IB-2) (Mitogen-activated protein kinase 8-interacting protein 2) Length = 824 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = -2 Query: 326 ICQDSEDHRRKDLLPTPYQTFLEGEENEVRERSVDG-AQEGVDQSAHGSSPG 174 IC +D + +++ + E EE E E DG QEG D + +PG Sbjct: 71 ICSFQDDFQEFEMIDDNEEEDDEDEEEEEEEEEGDGEGQEGGDPGSEAPAPG 122
>HPSE_BOVIN (Q9MYY0) Heparanase precursor (EC 3.2.-.-) [Contains: Heparanase 8| kDa subunit; Heparanase 50 kDa subunit] Length = 545 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +3 Query: 123 IIDS-TWNHSLVSVPVRTSWRAAMGALIDTFLSSVDASL 236 +IDS TW+H V+ + T ++DTF+SSV +L Sbjct: 291 VIDSVTWHHYYVNGRIATKEDFLNPDILDTFISSVQKTL 329
>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor| Length = 910 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -2 Query: 308 DHRRKDLLPTPYQTFLEGEENEVRERSVDGAQEGVDQSAHGSSPGSSYRHTD 153 DH+ +L T G+E+E RE + D Q+ QS ++PG ++ TD Sbjct: 225 DHQSTELDGTQ-DAIPAGDESEAREGAEDKPQDYSLQSEDTATPGPDHQPTD 275
>FCGR1_HUMAN (P12314) High affinity immunoglobulin gamma Fc receptor I precursor| (Fc-gamma RI) (FcRI) (IgG Fc receptor I) (CD64 antigen) Length = 374 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -3 Query: 232 EASTELKKVSIRAPMAALQEVRTGTLTKLWFHVL 131 EA+TE V R+P LQ + T +WFHVL Sbjct: 261 EAATEDGNVLKRSPELELQVLGLQLPTPVWFHVL 294
>APA2_KLULA (P49348) 5',5'''-P-1,P-4-tetraphosphate phosphorylase 2 (EC| 2.7.7.53) (Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase) (AP-4-A phosphorylase) (Ap4A phosphorylase II) (AP,A phosphorylase) (ATP adenylyltransferase) Length = 331 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = -2 Query: 335 CGKICQDSEDHRRKDLLPTPYQ------TFLEGEENEVRERSVDGAQEGVDQSAHGSSP 177 CG S+DH+ +LP PY+ G+E+ + + Q+ AH + P Sbjct: 149 CGPNSGSSQDHKHLQILPLPYKFVPYQDKLCSGKEHFIPNAKTEPLQDAKIPFAHYAVP 207
>YKD0_YEAST (P36099) Hypothetical 23.0 kDa protein in IXR1-TFA1 intergenic| region Length = 201 Score = 27.3 bits (59), Expect = 9.6 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -3 Query: 316 IAKITGGKIYFLLHIKHSSKERRT 245 I TG I+ L H KHSSK R T Sbjct: 89 IGLYTGSHIWALTHCKHSSKSRGT 112
>POLG_GBVB (Q69422) Genome polyprotein [Contains: Core protein; Envelope| glycoprotein E1; Envelope glycoprotein E2 (NS1); p13; Protease NS2-3 (EC 3.4.22.-); Serine protease/NTPase/helicase NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.1.-) (Hepacivirin) (NS3P) Length = 2864 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 Query: 212 EGVDQSAHGSSPGSSYRHTD*TVVPCTVDYASDTDKFMQIIGIAS 78 + V +AH S G H ++ P TVD A+D D + G S Sbjct: 989 DNVLYTAHHGSKGRRLAHPTGSIHPITVDAANDQDIYQPPCGAGS 1033 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,427,406 Number of Sequences: 219361 Number of extensions: 819858 Number of successful extensions: 2144 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2144 length of database: 80,573,946 effective HSP length: 89 effective length of database: 61,050,817 effective search space used: 1465219608 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)