Clone Name | rbah62j05 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_872136.1| PREDICTED: Bos taurus similar to olfactory receptor Olr837, transcript variant 3 (LOC514266), mRNA Length = 960 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tgtttgatatggagtaggaag 287 ||||||||||||||||||||| Sbjct: 956 tgtttgatatggagtaggaag 936
>emb|Z99262.1|SPAC9E9 S.pombe chromosome I cosmid c9E9 Length = 38078 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 gtgatcttcgctatcttgaca 323 ||||||||||||||||||||| Sbjct: 23342 gtgatcttcgctatcttgaca 23322
>gb|AC124384.4| Mus musculus BAC clone RP24-413G2 from chromosome 12, complete sequence Length = 183707 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 240 aacctcgttctcctctccttcgaggaatgtttg 272 ||||||||||||| |||||| |||||| ||||| Sbjct: 85322 aacctcgttctccactccttagaggaaggtttg 85354
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 166014 gcttcgccaaaaagaaagga 166033 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 65394 gcttcgccaaaaagaaagga 65413
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 507013 gcttcgccaaaaagaaagga 507032 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 392144 gcttcgccaaaaagaaagga 392125
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 410293 gcttcgccaaaaagaaagga 410312 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 103485 gcttcgccaaaaagaaagga 103504
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 358180 gcttcgccaaaaagaaagga 358199 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcttcgccaaaaagaaagga 55 |||||||||||||||||||| Sbjct: 174785 gcttcgccaaaaagaaagga 174804
>emb|AL360232.24| Human DNA sequence from clone RP11-374I18 on chromosome 6, complete sequence Length = 157784 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 agtttagtcagtgtgcctgt 166 |||||||||||||||||||| Sbjct: 95200 agtttagtcagtgtgcctgt 95181
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acgaacttcctggagagctg 186 |||||||||||||||||||| Sbjct: 1939342 acgaacttcctggagagctg 1939361
>emb|CT030643.5| Mouse DNA sequence from clone RP23-348M4 on chromosome 12, complete sequence Length = 209600 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 tctgcataaacttgtctgtatctg 118 ||||||||| |||||||||||||| Sbjct: 46094 tctgcataaccttgtctgtatctg 46117
>emb|AL731552.11| Mouse DNA sequence from clone RP23-113K24 on chromosome 2, complete sequence Length = 203304 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 tctttcctccggtgatcttc 311 |||||||||||||||||||| Sbjct: 38952 tctttcctccggtgatcttc 38933
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 aatctttcctccggtgatcttcgc 313 ||||||||||||||||||| |||| Sbjct: 1563659 aatctttcctccggtgatcctcgc 1563636 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,082,265 Number of Sequences: 3902068 Number of extensions: 3082265 Number of successful extensions: 48035 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47993 Number of HSP's gapped (non-prelim): 42 length of query: 342 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 320 effective length of database: 17,147,199,772 effective search space: 5487103927040 effective search space used: 5487103927040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)