Clone Name | rbah62i19 |
---|---|
Clone Library Name | barley_pub |
>C71DB_LOTJA (O22307) Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment)| Length = 490 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = -3 Query: 371 GDKLSSFDMSEKFGLTVSRRYDLQLKP-ITH 282 G K D++E+FG+TVS++ DL L P I+H Sbjct: 455 GIKNEDLDLTEEFGVTVSKKEDLCLIPSISH 485
>C71C4_MAIZE (Q43257) Cytochrome P450 71C4 (EC 1.14.-.-) (Benzoxazineless 2)| Length = 538 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -3 Query: 371 GDKLSSFDMSEKFGLTVSRRYDLQLKP 291 G K DM+E FG+TVSR+ L L P Sbjct: 509 GMKAEDVDMTEVFGITVSRKEKLLLVP 535
>C71BC_ARATH (Q9ZU07) Cytochrome P450 71B12 (EC 1.14.-.-)| Length = 496 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -3 Query: 371 GDKLSSFDMSEKFGLTVSRRYDLQLKPITHVWS 273 G K++ D+ E +GL ++ LQL P+ W+ Sbjct: 464 GMKVADVDLEESYGLVCPKKIPLQLIPVLTQWT 496
>RGYR2_AQUAE (O67226) Reverse gyrase 2 [Includes: Helicase (EC 3.6.1.-);| Topoisomerase (EC 5.99.1.3)] Length = 1159 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +1 Query: 190 YVLKVKVPEHAFPCEYTSSPRHLYGIAL 273 Y + + P+H FP E T SP L+G+ L Sbjct: 385 YAVFLDPPKHVFPTELTLSPPLLHGLLL 412
>C71BB_ARATH (P58049) Cytochrome P450 71B11 (EC 1.14.-.-)| Length = 496 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = -3 Query: 371 GDKLSSFDMSEKFGLTVSRRYDLQLKPITHVWS 273 G ++ D+ E +GL ++ LQL P+ WS Sbjct: 464 GMEVEDVDLEESYGLVCPKKVPLQLIPVLTQWS 496
>SRG15_CAEEL (Q18428) Serpentine receptor class gamma-15 (Protein srg-15)| Length = 320 Score = 27.3 bits (59), Expect = 9.3 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 10/90 (11%) Frame = -1 Query: 292 LLHMCGPMLCHTSDAGSLCIHMEMHVQVLSPLAHIIIVVN--GCIFMQ*H--------KK 143 L + GP +S + ++ +H ++ +AHI +V+N C+ M + K Sbjct: 91 LCPIVGPFFWASSLIPKIYFYLSVHTRLSKCVAHICMVLNRMTCVLMPTYYGQIWRKLTK 150 Query: 142 SSLQTLCIAFTKPFWYCNVHDRIYYVVRSY 53 SL +CI W + R +YV+ SY Sbjct: 151 VSLVIICILPLGGTWNIIISPR-FYVLPSY 179
>CFTR_MOUSE (P26361) Cystic fibrosis transmembrane conductance regulator (CFTR)| (cAMP-dependent chloride channel) (ATP-binding cassette transporter sub-family C member 7) Length = 1476 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -2 Query: 273 QCYAIQVTRGACVFTWKCMFRYFHL*HISLLL*MVVSLCNSIRKVHCKHYVLHLLNHSGI 94 +C+ V + V TW RYF L H LLL ++ + + +V +VL LL ++ + Sbjct: 826 ECFLDDVIKIPPVTTWNTYLRYFTL-HKGLLLVLIWCVLVFLVEVAASLFVLWLLKNNPV 884 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,289,233 Number of Sequences: 219361 Number of extensions: 1068299 Number of successful extensions: 1995 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1964 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1995 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)