ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62i14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
2dbj|AK105673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 6e-40
3gb|AY106785.1| Zea mays PCO139190 mRNA sequence 137 3e-29
4gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
5gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
8dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 111 2e-21
11gb|BT013814.1| Lycopersicon esculentum clone 132735R, mRNA sequence 80 7e-12
12emb|AJ310676.1|LES310676 Lycopersicon esculentum mRNA for Xaa-Pr... 80 7e-12
13emb|CR962121.2| Medicago truncatula chromosome 5 clone mte1-77f5... 72 2e-09
14ref|NM_119840.2| Arabidopsis thaliana ATAPP1 AT4G36760 (ATAPP1) ... 46 0.098
15ref|NM_202967.1| Arabidopsis thaliana ATAPP1 AT4G36760 (ATAPP1) ... 46 0.098
16gb|AY552784.1| Arabidopsis thaliana aminopeptidase P short isofo... 46 0.098
17gb|AF360249.1| Arabidopsis thaliana At4g36760 mRNA sequence 46 0.098
18emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA ... 46 0.098
19emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, ... 46 0.098
20emb|BX827450.1|CNS0A2CM Arabidopsis thaliana Full-length cDNA Co... 46 0.098
21gb|AY143575.1| Arabidopsis thaliana aminopeptidase P mRNA, compl... 46 0.098
22ref|XM_686620.1| PREDICTED: Danio rerio similar to Lon protease ... 42 1.5
23ref|XM_467971.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
24gb|AC158579.7| Mus musculus chromosome 7, clone RP24-180F12, com... 40 6.0
25gb|AC149604.1| Mus musculus BAC clone RP23-472I3 from chromosome... 40 6.0
26gb|AC158947.4| Mus musculus chromosome 7, clone RP23-230A4, comp... 40 6.0
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.0
28emb|CR538722.1| M.truncatula DNA sequence from clone MTH2-11A20 ... 40 6.0
29gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosom... 40 6.0
30gb|AC117223.3| Mus musculus BAC clone RP23-348B1 from chromosome... 40 6.0
31ref|XM_652180.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.0
32gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 40 6.0
33gb|AC155806.3| Mus musculus BAC clone RP24-308M10 from chromosom... 40 6.0
34dbj|AK134246.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN... 40 6.0
35gb|AC110187.11| Mus musculus chromosome 7, clone RP24-541E23, co... 40 6.0
36gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 6.0
37gb|AC017109.5| Homo sapiens chromosome 4 clone RP11-568O24, comp... 40 6.0
38gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom... 40 6.0
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
41gb|AC010133.4|AC010133 Homo sapiens clone RP11-118E9, complete s... 40 6.0
42emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chr... 40 6.0
43gb|AC020940.6| Homo sapiens chromosome 5 clone CTD-2311E21, comp... 40 6.0
44dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 40 6.0
45dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
46dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
47emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 40 6.0
48emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chr... 40 6.0 
>dbj|AK102913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113M01, full
            insert sequence
          Length = 2519

 Score =  180 bits (91), Expect = 3e-42
 Identities = 226/271 (83%)
 Strand = Plus / Minus

                                                                        
Query: 178  tggcttaactgctcgcagttataggttcagtggccttcctcagccattccttctcctgaa 237
            ||||||||| |||| |||| ||||| ||||| || |||||||||||||||||||||||  
Sbjct: 2014 tggcttaacagctcacagtaataggctcagtagctttcctcagccattccttctcctgct 1955

                                                                        
Query: 238  catttaggtaagactccaagattttctggcagtcggagtggtacacgtttacccattcga 297
            |||| ||||||| || ||| ||  |  |||| || ||||| |||  |||||||||||| |
Sbjct: 1954 cattcaggtaaggctgcaaaatccttcggcaatctgagtgatacgtgtttacccattcaa 1895

                                                                        
Query: 298  tctccgcaggggtcaacaaggcggtgtttataagtttagtctggtatggagcccatgtta 357
            |||| ||||||| || ||| | || ||  || || || |||||||| |||||||||||||
Sbjct: 1894 tctcggcaggggccagcaaagtggcgtcaatcagctttgtctggtacggagcccatgtta 1835

                                                                        
Query: 358  tatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcagcctctttga 417
            |||||||||||| |||||||||||| || |||||||||||||| ||||  || ||||  |
Sbjct: 1834 tatgttcaaatgccaaataacccttatctccaaaattaaatttagtattggcatcttgaa 1775

                                           
Query: 418  ctataaggacattctccaaccttataccaaa 448
            |||| || |||||||||||||||||||||||
Sbjct: 1774 ctatcagaacattctccaaccttataccaaa 1744
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>dbj|AK105673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A09, full
            insert sequence
          Length = 1721

 Score =  172 bits (87), Expect = 6e-40
 Identities = 210/251 (83%)
 Strand = Plus / Minus

                                                                        
Query: 198  ataggttcagtggccttcctcagccattccttctcctgaacatttaggtaagactccaag 257
            ||||| ||||| || |||||||||||||||||||||||  | || ||||| |  | ||  
Sbjct: 1365 ataggctcagtagctttcctcagccattccttctcctgctcgttcaggtatggttgcaga 1306

                                                                        
Query: 258  attttctggcagtcggagtggtacacgtttacccattcgatctccgcaggggtcaacaag 317
            |||||  |||| || | ||| ||  ||||||||||||| ||||| || ||||||| ||| 
Sbjct: 1305 atttttcggcaatctgcgtgatatgcgtttacccattcaatctcggccggggtcagcaaa 1246

                                                                        
Query: 318  gcggtgtttataagtttagtctggtatggagcccatgttatatgttcaaatgacaaataa 377
            | ||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1245 gtggtgtctatcagttttgtctggtatggagcccatgttatatgttcaaatgccaaataa 1186

                                                                        
Query: 378  cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
            ||||| || || |||||| |||| |||| ||||||||| ||||| || ||||||||||| 
Sbjct: 1185 cccttatctccgaaattatatttagtattagcctctttaactatcagaacattctccaat 1126

                       
Query: 438  cttataccaaa 448
            |||||||||||
Sbjct: 1125 cttataccaaa 1115
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>gb|AY106785.1| Zea mays PCO139190 mRNA sequence
          Length = 1536

 Score =  137 bits (69), Expect = 3e-29
 Identities = 201/245 (82%)
 Strand = Plus / Minus

                                                                        
Query: 204  tcagtggccttcctcagccattccttctcctgaacatttaggtaagactccaagattttc 263
            ||||| || ||| ||||||||| |||||||||  | || || | || ||||||||| |||
Sbjct: 1154 tcagtagctttcatcagccattgcttctcctgctcgttcagatgaggctccaagatcttc 1095

                                                                        
Query: 264  tggcagtcggagtggtacacgtttacccattcgatctccgcaggggtcaacaaggcggtg 323
             ||||||| |||||||||  ||| ||||| ||||||||  |||||||||  |   |||||
Sbjct: 1094 cggcagtctgagtggtacgtgttcacccagtcgatctcaacaggggtcagaagcccggtg 1035

                                                                        
Query: 324  tttataagtttagtctggtatggagcccatgttatatgttcaaatgacaaataacccttc 383
            | ||| || || |||||||||||||||||||||||||||||||||| ||||||||| || 
Sbjct: 1034 tctatcagcttggtctggtatggagcccatgttatatgttcaaatgccaaataaccttta 975

                                                                        
Query: 384  tccccaaaattaaattttgtatcagcctctttgactataaggacattctccaaccttata 443
            || ||||||||||| || | ||  || ||||||   ||||| ||||||||||| ||||||
Sbjct: 974  tctccaaaattaaacttagcattggcgtctttgcaaataagtacattctccaatcttata 915

                 
Query: 444  ccaaa 448
            |||||
Sbjct: 914  ccaaa 910
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
              complete sequence
          Length = 148829

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                          
Query: 349    cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
              ||||||||||||||||||||| |||||||||||| || || |||||| |||| |||| ||
Sbjct: 148726 cccatgttatatgttcaaatgccaaataacccttatctccgaaattatatttagtattag 148785

                                                      
Query: 409    cctctttgactataaggacattctccaaccttataccaaa 448
              ||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 148786 cctctttaactatcagaacattctccaatcttataccaaa 148825



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                          
Query: 198    ataggttcagtggccttcctcagccattccttctcctgaacatttaggtaagactccaag 257
              ||||| ||||| || |||||||||||||||||||||||  | || ||||| |  | ||  
Sbjct: 148098 ataggctcagtagctttcctcagccattccttctcctgctcgttcaggtatggttgcaga 148157

                                                                          
Query: 258    attttctggcagtcggagtggtacacgtttacccattcgatctccgcaggggtcaacaag 317
              |||||  |||| || | ||| ||  ||||||||||||| ||||| || ||||||| ||| 
Sbjct: 148158 atttttcggcaatctgcgtgatatgcgtttacccattcaatctcggccggggtcagcaaa 148217

                                               
Query: 318    gcggtgtttataagtttagtctggtatggagcc 350
              | ||||| ||| ||||| |||||||||||||||
Sbjct: 148218 gtggtgtctatcagttttgtctggtatggagcc 148250
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>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                         
Query: 349   cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
             ||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||  |
Sbjct: 62456 cccatgttatatgttcaaatgccaaataacccttatctccaaaattaaatttagtattgg 62515

                                                     
Query: 409   cctctttgactataaggacattctccaaccttataccaaa 448
             | ||||  ||||| || |||||||||||||||||||||||
Sbjct: 62516 catcttgaactatcagaacattctccaaccttataccaaa 62555



 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                         
Query: 349   cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
             ||||||||||||||||||||| |||||||||||| || || |||||| |||| |||| ||
Sbjct: 48346 cccatgttatatgttcaaatgccaaataacccttatctccgaaattatatttagtattag 48405

                                                     
Query: 409   cctctttgactataaggacattctccaaccttataccaaa 448
             ||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 48406 cctctttaactatcagaacattctccaatcttataccaaa 48445



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 109/132 (82%)
 Strand = Plus / Plus

                                                                         
Query: 178   tggcttaactgctcgcagttataggttcagtggccttcctcagccattccttctcctgaa 237
             ||||||||| |||| |||| ||||| ||||| || |||||||||||||||||||||||  
Sbjct: 61193 tggcttaacagctcacagtaataggctcagtagctttcctcagccattccttctcctgct 61252

                                                                         
Query: 238   catttaggtaagactccaagattttctggcagtcggagtggtacacgtttacccattcga 297
             |||| ||||||| || ||| ||  |  |||| || ||||| |||  |||||||||||| |
Sbjct: 61253 cattcaggtaaggctgcaaaatccttcggcaatctgagtgatacgtgtttacccattcaa 61312

                         
Query: 298   tctccgcagggg 309
             |||| |||||||
Sbjct: 61313 tctcggcagggg 61324



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                         
Query: 198   ataggttcagtggccttcctcagccattccttctcctgaacatttaggtaagactccaag 257
             ||||| ||||| || |||||||||||||||||||||||  | || ||||| |  | ||  
Sbjct: 47718 ataggctcagtagctttcctcagccattccttctcctgctcgttcaggtatggttgcaga 47777

                                                                         
Query: 258   attttctggcagtcggagtggtacacgtttacccattcgatctccgcaggggtcaacaag 317
             |||||  |||| || | ||| ||  ||||||||||||| ||||| || ||||||| ||| 
Sbjct: 47778 atttttcggcaatctgcgtgatatgcgtttacccattcaatctcggccggggtcagcaaa 47837

                                              
Query: 318   gcggtgtttataagtttagtctggtatggagcc 350
             | ||||| ||| ||||| |||||||||||||||
Sbjct: 47838 gtggtgtctatcagttttgtctggtatggagcc 47870
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 349      cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
                ||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||  |
Sbjct: 19059638 cccatgttatatgttcaaatgccaaataacccttatctccaaaattaaatttagtattgg 19059697

                                                        
Query: 409      cctctttgactataaggacattctccaaccttataccaaa 448
                | ||||  ||||| || |||||||||||||||||||||||
Sbjct: 19059698 catcttgaactatcagaacattctccaaccttataccaaa 19059737



 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 349      cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
                ||||||||||||||||||||| |||||||||||| || || |||||| |||| |||| ||
Sbjct: 19045528 cccatgttatatgttcaaatgccaaataacccttatctccgaaattatatttagtattag 19045587

                                                        
Query: 409      cctctttgactataaggacattctccaaccttataccaaa 448
                ||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 19045588 cctctttaactatcagaacattctccaatcttataccaaa 19045627



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 109/132 (82%)
 Strand = Plus / Plus

                                                                            
Query: 178      tggcttaactgctcgcagttataggttcagtggccttcctcagccattccttctcctgaa 237
                ||||||||| |||| |||| ||||| ||||| || |||||||||||||||||||||||  
Sbjct: 19058375 tggcttaacagctcacagtaataggctcagtagctttcctcagccattccttctcctgct 19058434

                                                                            
Query: 238      catttaggtaagactccaagattttctggcagtcggagtggtacacgtttacccattcga 297
                |||| ||||||| || ||| ||  |  |||| || ||||| |||  |||||||||||| |
Sbjct: 19058435 cattcaggtaaggctgcaaaatccttcggcaatctgagtgatacgtgtttacccattcaa 19058494

                            
Query: 298      tctccgcagggg 309
                |||| |||||||
Sbjct: 19058495 tctcggcagggg 19058506



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                            
Query: 198      ataggttcagtggccttcctcagccattccttctcctgaacatttaggtaagactccaag 257
                ||||| ||||| || |||||||||||||||||||||||  | || ||||| |  | ||  
Sbjct: 19044900 ataggctcagtagctttcctcagccattccttctcctgctcgttcaggtatggttgcaga 19044959

                                                                            
Query: 258      attttctggcagtcggagtggtacacgtttacccattcgatctccgcaggggtcaacaag 317
                |||||  |||| || | ||| ||  ||||||||||||| ||||| || ||||||| ||| 
Sbjct: 19044960 atttttcggcaatctgcgtgatatgcgtttacccattcaatctcggccggggtcagcaaa 19045019

                                                 
Query: 318      gcggtgtttataagtttagtctggtatggagcc 350
                | ||||| ||| ||||| |||||||||||||||
Sbjct: 19045020 gtggtgtctatcagttttgtctggtatggagcc 19045052
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 349      cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
                ||||||||||||||||||| | |||||||||||| || |||||||||||||| ||||  |
Sbjct: 27036419 cccatgttatatgttcaaaagccaaataacccttatctccaaaattaaatttagtattgg 27036478

                                                        
Query: 409      cctctttgactataaggacattctccaaccttataccaaa 448
                | ||||| ||||| || |||||||||||||||||||||||
Sbjct: 27036479 cttctttaactatcagaacattctccaaccttataccaaa 27036518



 Score =  101 bits (51), Expect = 2e-18
 Identities = 141/171 (82%)
 Strand = Plus / Plus

                                                                            
Query: 178      tggcttaactgctcgcagttataggttcagtggccttcctcagccattccttctcctgaa 237
                ||||||||| ||||||||  ||||||||||| || |||||||||||||||||||||||  
Sbjct: 27035973 tggcttaacagctcgcagcgataggttcagtagctttcctcagccattccttctcctgct 27036032

                                                                            
Query: 238      catttaggtaagactccaagattttctggcagtcggagtggtacacgtttacccattcga 297
                |||| |||||||  | ||| |||||   ||| || ||||| ||| | ||||||||||| |
Sbjct: 27036033 cattcaggtaaggttgcaaaatttttctgcaatccgagtgatacgcatttacccattcaa 27036092

                                                                   
Query: 298      tctccgcaggggtcaacaaggcggtgtttataagtttagtctggtatggag 348
                |||| |||||||| |  |||| ||||| ||| ||||| |||||||| ||||
Sbjct: 27036093 tctcagcaggggtaagtaaggtggtgtctatcagttttgtctggtacggag 27036143
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>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0065C04
          Length = 165270

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                          
Query: 349    cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
              ||||||||||||||||||| | |||||||||||| || |||||||||||||| ||||  |
Sbjct: 160180 cccatgttatatgttcaaaagccaaataacccttatctccaaaattaaatttagtattgg 160239

                                                      
Query: 409    cctctttgactataaggacattctccaaccttataccaaa 448
              | ||||| ||||| || |||||||||||||||||||||||
Sbjct: 160240 cttctttaactatcagaacattctccaaccttataccaaa 160279



 Score =  101 bits (51), Expect = 2e-18
 Identities = 141/171 (82%)
 Strand = Plus / Plus

                                                                          
Query: 178    tggcttaactgctcgcagttataggttcagtggccttcctcagccattccttctcctgaa 237
              ||||||||| ||||||||  ||||||||||| || |||||||||||||||||||||||  
Sbjct: 159734 tggcttaacagctcgcagcgataggttcagtagctttcctcagccattccttctcctgct 159793

                                                                          
Query: 238    catttaggtaagactccaagattttctggcagtcggagtggtacacgtttacccattcga 297
              |||| |||||||  | ||| |||||   ||| || ||||| ||| | ||||||||||| |
Sbjct: 159794 cattcaggtaaggttgcaaaatttttctgcaatccgagtgatacgcatttacccattcaa 159853

                                                                 
Query: 298    tctccgcaggggtcaacaaggcggtgtttataagtttagtctggtatggag 348
              |||| |||||||| |  |||| ||||| ||| ||||| |||||||| ||||
Sbjct: 159854 tctcagcaggggtaagtaaggtggtgtctatcagttttgtctggtacggag 159904
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>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0473H04
          Length = 155204

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                        
Query: 349  cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
            ||||||||||||||||||| | |||||||||||| || |||||||||||||| ||||  |
Sbjct: 5229 cccatgttatatgttcaaaagccaaataacccttatctccaaaattaaatttagtattgg 5288

                                                    
Query: 409  cctctttgactataaggacattctccaaccttataccaaa 448
            | ||||| ||||| || |||||||||||||||||||||||
Sbjct: 5289 cttctttaactatcagaacattctccaaccttataccaaa 5328



 Score =  101 bits (51), Expect = 2e-18
 Identities = 141/171 (82%)
 Strand = Plus / Plus

                                                                        
Query: 178  tggcttaactgctcgcagttataggttcagtggccttcctcagccattccttctcctgaa 237
            ||||||||| ||||||||  ||||||||||| || |||||||||||||||||||||||  
Sbjct: 4783 tggcttaacagctcgcagcgataggttcagtagctttcctcagccattccttctcctgct 4842

                                                                        
Query: 238  catttaggtaagactccaagattttctggcagtcggagtggtacacgtttacccattcga 297
            |||| |||||||  | ||| |||||   ||| || ||||| ||| | ||||||||||| |
Sbjct: 4843 cattcaggtaaggttgcaaaatttttctgcaatccgagtgatacgcatttacccattcaa 4902

                                                               
Query: 298  tctccgcaggggtcaacaaggcggtgtttataagtttagtctggtatggag 348
            |||| |||||||| |  |||| ||||| ||| ||||| |||||||| ||||
Sbjct: 4903 tctcagcaggggtaagtaaggtggtgtctatcagttttgtctggtacggag 4953
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 349      cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
                ||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||  |
Sbjct: 19218287 cccatgttatatgttcaaatgccaaataacccttatctccaaaattaaatttagtattgg 19218346

                                                        
Query: 409      cctctttgactataaggacattctccaaccttataccaaa 448
                | ||||  ||||| || |||||||||||||||||||||||
Sbjct: 19218347 catcttgaactatcagaacattctccaaccttataccaaa 19218386



 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 349      cccatgttatatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcag 408
                ||||||||||||||||||||| |||||||||||| || || |||||| |||| |||| ||
Sbjct: 19204177 cccatgttatatgttcaaatgccaaataacccttatctccgaaattatatttagtattag 19204236

                                                        
Query: 409      cctctttgactataaggacattctccaaccttataccaaa 448
                ||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 19204237 cctctttaactatcagaacattctccaatcttataccaaa 19204276



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 109/132 (82%)
 Strand = Plus / Plus

                                                                            
Query: 178      tggcttaactgctcgcagttataggttcagtggccttcctcagccattccttctcctgaa 237
                ||||||||| |||| |||| ||||| ||||| || |||||||||||||||||||||||  
Sbjct: 19217024 tggcttaacagctcacagtaataggctcagtagctttcctcagccattccttctcctgct 19217083

                                                                            
Query: 238      catttaggtaagactccaagattttctggcagtcggagtggtacacgtttacccattcga 297
                |||| ||||||| || ||| ||  |  |||| || ||||| |||  |||||||||||| |
Sbjct: 19217084 cattcaggtaaggctgcaaaatccttcggcaatctgagtgatacgtgtttacccattcaa 19217143

                            
Query: 298      tctccgcagggg 309
                |||| |||||||
Sbjct: 19217144 tctcggcagggg 19217155



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 123/153 (80%)
 Strand = Plus / Plus

                                                                            
Query: 198      ataggttcagtggccttcctcagccattccttctcctgaacatttaggtaagactccaag 257
                ||||| ||||| || |||||||||||||||||||||||  | || ||||| |  | ||  
Sbjct: 19203549 ataggctcagtagctttcctcagccattccttctcctgctcgttcaggtatggttgcaga 19203608

                                                                            
Query: 258      attttctggcagtcggagtggtacacgtttacccattcgatctccgcaggggtcaacaag 317
                |||||  |||| || | ||| ||  ||||||||||||| ||||| || ||||||| ||| 
Sbjct: 19203609 atttttcggcaatctgcgtgatatgcgtttacccattcaatctcggccggggtcagcaaa 19203668

                                                 
Query: 318      gcggtgtttataagtttagtctggtatggagcc 350
                | ||||| ||| ||||| |||||||||||||||
Sbjct: 19203669 gtggtgtctatcagttttgtctggtatggagcc 19203701
to top
>gb|BT013814.1| Lycopersicon esculentum clone 132735R, mRNA sequence
          Length = 2166

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  tctggtatggagcccatgttatatgttcaaatgacaaataacccttctccccaaaattaa 396
            |||| ||||| ||||| |||||||| ||||||| ||| |||||||| || ||||| || |
Sbjct: 1893 tctgatatggtgcccaagttatatgctcaaatgtcaagtaacccttgtcgccaaagttga 1834

                                                                
Query: 397  attttgtatcagcctctttgactataaggacattctccaaccttataccaaa 448
            | || ||||   |||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1833 acttagtattgccctctttgacaataagcacattctccaatcttataccaaa 1782
to top
>emb|AJ310676.1|LES310676 Lycopersicon esculentum mRNA for Xaa-Pro aminopeptidase 2 (app2 gene)
          Length = 2138

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                        
Query: 337  tctggtatggagcccatgttatatgttcaaatgacaaataacccttctccccaaaattaa 396
            |||| ||||| ||||| |||||||| ||||||| ||| |||||||| || ||||| || |
Sbjct: 1816 tctgatatggtgcccaagttatatgctcaaatgtcaagtaacccttgtcgccaaagttga 1757

                                                                
Query: 397  attttgtatcagcctctttgactataaggacattctccaaccttataccaaa 448
            | || ||||   |||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 1756 acttagtattgccctctttgacaataagcacattctccaatcttataccaaa 1705
to top
>emb|CR962121.2| Medicago truncatula chromosome 5 clone mte1-77f5, COMPLETE SEQUENCE
          Length = 107392

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                         
Query: 357   atatgttcaaatgacaaataacccttctccccaaaattaaattttgtatcagcctctttg 416
             ||||| ||||| || || ||||| || || |||||||||||||||||||||||||| |||
Sbjct: 41178 atatgctcaaacgataagtaacctttatcgccaaaattaaattttgtatcagcctcgttg 41237

                                             
Query: 417   actataaggacattctccaaccttataccaaa 448
             |  | ||| ||||||||||| ||||| |||||
Sbjct: 41238 ataacaagcacattctccaatcttatcccaaa 41269
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>ref|NM_119840.2| Arabidopsis thaliana ATAPP1 AT4G36760 (ATAPP1) transcript variant
            AT4G36760.1 mRNA, complete cds
          Length = 2212

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
            ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 1787 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 1728

                       
Query: 438  cttataccaaa 448
            || ||||||||
Sbjct: 1727 ctaataccaaa 1717
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>ref|NM_202967.1| Arabidopsis thaliana ATAPP1 AT4G36760 (ATAPP1) transcript variant
            AT4G36760.2 mRNA, complete cds
          Length = 2227

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
            ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 1802 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 1743

                       
Query: 438  cttataccaaa 448
            || ||||||||
Sbjct: 1742 ctaataccaaa 1732
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>gb|AY552784.1| Arabidopsis thaliana aminopeptidase P short isoform mRNA, complete
            cds
          Length = 2078

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
            ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 1706 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 1647

                       
Query: 438  cttataccaaa 448
            || ||||||||
Sbjct: 1646 ctaataccaaa 1636
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>gb|AF360249.1| Arabidopsis thaliana At4g36760 mRNA sequence
          Length = 2168

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
            ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 1783 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 1724

                       
Query: 438  cttataccaaa 448
            || ||||||||
Sbjct: 1723 ctaataccaaa 1713
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>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2
          Length = 198354

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 378   cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
             ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 39720 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 39779

                        
Query: 438   cttataccaaa 448
             || ||||||||
Sbjct: 39780 ctaataccaaa 39790
to top
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86
          Length = 198780

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 378   cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
             ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 17258 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 17199

                        
Query: 438   cttataccaaa 448
             || ||||||||
Sbjct: 17198 ctaataccaaa 17188
to top
>emb|BX827450.1|CNS0A2CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS57ZB12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2162

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
            ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 1793 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 1734

                       
Query: 438  cttataccaaa 448
            || ||||||||
Sbjct: 1733 ctaataccaaa 1723
to top
>gb|AY143575.1| Arabidopsis thaliana aminopeptidase P mRNA, complete cds
          Length = 2140

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  cccttctccccaaaattaaattttgtatcagcctctttgactataaggacattctccaac 437
            ||||| || |||||||| ||||  || ||||| || ||||| | ||| ||||||||||||
Sbjct: 1763 cccttgtcgccaaaattgaattcagtctcagcgtcattgacaacaagaacattctccaac 1704

                       
Query: 438  cttataccaaa 448
            || ||||||||
Sbjct: 1703 ctaataccaaa 1693
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>ref|XM_686620.1| PREDICTED: Danio rerio similar to Lon protease homolog,
           mitochondrial precursor (Lon protease-like protein)
           (LONP) (LONHs) (LOC563257), mRNA
          Length = 2274

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 41  cccgcctcacgctaggcagca 61
           |||||||||||||||||||||
Sbjct: 86  cccgcctcacgctaggcagca 106
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>ref|XM_467971.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 gcagtcggagtggtacacgt 285
           ||||||||||||||||||||
Sbjct: 675 gcagtcggagtggtacacgt 656
to top
>gb|AC158579.7| Mus musculus chromosome 7, clone RP24-180F12, complete sequence
          Length = 179049

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    ataaggacattctccaacct 439
              ||||||||||||||||||||
Sbjct: 169553 ataaggacattctccaacct 169572
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>gb|AC149604.1| Mus musculus BAC clone RP23-472I3 from chromosome 15, complete sequence
          Length = 177501

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   ctcagccattccttctcctg 235
             ||||||||||||||||||||
Sbjct: 44207 ctcagccattccttctcctg 44188
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>gb|AC158947.4| Mus musculus chromosome 7, clone RP23-230A4, complete sequence
          Length = 191195

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   ataaggacattctccaacct 439
             ||||||||||||||||||||
Sbjct: 42195 ataaggacattctccaacct 42176
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 266      gcagtcggagtggtacacgt 285
                ||||||||||||||||||||
Sbjct: 29902583 gcagtcggagtggtacacgt 29902564
to top
>emb|CR538722.1| M.truncatula DNA sequence from clone MTH2-11A20 on chromosome 3,
             complete sequence
          Length = 118829

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   caacaaggcggtgtttataa 330
             ||||||||||||||||||||
Sbjct: 27388 caacaaggcggtgtttataa 27369
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>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete
            sequence
          Length = 188677

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 211  ccttcctcagccattccttctcct 234
            |||||||| |||||||||||||||
Sbjct: 4888 ccttcctctgccattccttctcct 4911
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>gb|AC117223.3| Mus musculus BAC clone RP23-348B1 from chromosome 2, complete sequence
          Length = 183972

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ggcagcacgaaatacataaa 74
             ||||||||||||||||||||
Sbjct: 54043 ggcagcacgaaatacataaa 54062
to top
>ref|XM_652180.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (3.t00011)
           partial mRNA
          Length = 696

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 ttctcctgaacatttaggta 247
           ||||||||||||||||||||
Sbjct: 327 ttctcctgaacatttaggta 346
to top
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
              sequence
          Length = 159661

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    gcagtcggagtggtacacgt 285
              ||||||||||||||||||||
Sbjct: 108023 gcagtcggagtggtacacgt 108042
to top
>gb|AC155806.3| Mus musculus BAC clone RP24-308M10 from chromosome 7, complete sequence
          Length = 202336

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    ccttcctcagccattccttctcct 234
              |||||||| |||||||||||||||
Sbjct: 160173 ccttcctctgccattccttctcct 160196
to top
>dbj|AK134246.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched
            library, clone:5930401C08 product:carnitine
            palmitoyltransferase 1c, full insert sequence
          Length = 3260

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 211  ccttcctcagccattccttctcct 234
            |||||||| |||||||||||||||
Sbjct: 2921 ccttcctctgccattccttctcct 2898
to top
>gb|AC110187.11| Mus musculus chromosome 7, clone RP24-541E23, complete sequence
          Length = 181046

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    ataaggacattctccaacct 439
              ||||||||||||||||||||
Sbjct: 158513 ataaggacattctccaacct 158532
to top
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     aggcggtgtttataagttta 335
               ||||||||||||||||||||
Sbjct: 4255913 aggcggtgtttataagttta 4255932
to top
>gb|AC017109.5| Homo sapiens chromosome 4 clone RP11-568O24, complete sequence
          Length = 195169

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    aaaattaaattttgtatcag 408
              ||||||||||||||||||||
Sbjct: 120947 aaaattaaattttgtatcag 120966
to top
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
             sequence
          Length = 139946

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   gcagtcggagtggtacacgt 285
             ||||||||||||||||||||
Sbjct: 68524 gcagtcggagtggtacacgt 68505
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 266      gcagtcggagtggtacacgt 285
                ||||||||||||||||||||
Sbjct: 29994005 gcagtcggagtggtacacgt 29993986
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 266      gcagtcggagtggtacacgt 285
                ||||||||||||||||||||
Sbjct: 32343641 gcagtcggagtggtacacgt 32343622
to top
>gb|AC010133.4|AC010133 Homo sapiens clone RP11-118E9, complete sequence
          Length = 152074

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 364   caaatgacaaataacccttctccc 387
             |||||||||||||||| |||||||
Sbjct: 41031 caaatgacaaataacctttctccc 41008
to top
>emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chromosome 2, complete
             sequence
          Length = 219704

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ggcagcacgaaatacataaa 74
             ||||||||||||||||||||
Sbjct: 54039 ggcagcacgaaatacataaa 54058
to top
>gb|AC020940.6| Homo sapiens chromosome 5 clone CTD-2311E21, complete sequence
          Length = 112922

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   tggagcccatgttatatgtt 363
             ||||||||||||||||||||
Sbjct: 71443 tggagcccatgttatatgtt 71462
to top
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 105     attacagttgattaaatatt 124
               ||||||||||||||||||||
Sbjct: 1151244 attacagttgattaaatatt 1151263
to top
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A11
          Length = 132352

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    gcagtcggagtggtacacgt 285
              ||||||||||||||||||||
Sbjct: 119473 gcagtcggagtggtacacgt 119454
to top
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1767_D02
          Length = 139145

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  gcagtcggagtggtacacgt 285
            ||||||||||||||||||||
Sbjct: 5154 gcagtcggagtggtacacgt 5135
to top
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 388    caaaattaaattttgtatcagcctcttt 415
              ||||| |||||||||| |||||||||||
Sbjct: 921788 caaaagtaaattttgtctcagcctcttt 921815
to top
>emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chromosome X, complete
              sequence
          Length = 186645

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 342    tatggagcccatgttatatgttca 365
              ||||||||||||||| ||||||||
Sbjct: 160134 tatggagcccatgttttatgttca 160157


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,131,593
Number of Sequences: 3902068
Number of extensions: 4131593
Number of successful extensions: 76523
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76261
Number of HSP's gapped (non-prelim): 253
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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