ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 967 0.0
2gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 541 e-151
3gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 541 e-151
4gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 531 e-148
5emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 462 e-127
6gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 454 e-124
7gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 454 e-124
8gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 367 2e-98
9dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 230 4e-57
10dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 230 4e-57
11gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
12gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
13gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 127 4e-26
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
15dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
16dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
17dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
18dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
20dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 127 4e-26
21gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 121 2e-24
22dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
23gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 119 9e-24
24gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 119 9e-24
25gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 115 1e-22
26gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 98 3e-17
27gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 98 3e-17
28gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 98 3e-17
29gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 96 1e-16
30gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 96 1e-16
31gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 96 1e-16
32gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 96 1e-16
33gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 82 2e-12
34emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 80 8e-12
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
36dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
37emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 56 1e-04
38gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 44 0.44
39gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.44
40emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c... 44 0.44
41gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp... 42 1.7
42gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp... 42 1.7
43dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
44emb|Y10657.1|CLRCAGENE C.littorale rca gene 42 1.7
45gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
46emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
47gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp... 42 1.7
48gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 6.8
49gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 40 6.8
50ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 6.8
51gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 6.8
52gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 6.8
53gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 6.8
54gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 6.8
55gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc... 40 6.8
56gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 6.8
57ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 6.8
58gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.8
59dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 6.8
60gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 6.8
61gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 6.8
62gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 6.8
63emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 6.8
64gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 6.8
65ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 6.8
66gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 40 6.8
67gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 6.8 
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  967 bits (488), Expect = 0.0
 Identities = 499/504 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatgggtatactnaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 60
            |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 aatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 1333

                                                                        
Query: 61   atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 1273

                                                                        
Query: 121  gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 1213

                                                                        
Query: 181  ggtgcaaccttncggcacgggcaaagtaccttgctgtgctcctttaccgtagaaggaacc 240
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttaccgtagaaggaacc 1153

                                                                        
Query: 241  agtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 agtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 1093

                                                                        
Query: 301  aagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 aagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcag 1033

                                                                        
Query: 361  cttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccag 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 cttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccag 973

                                                                        
Query: 421  cctcttgccaatgttctcgattccggnagagccgacccacttgcgcacctnatcgtcgta 480
            |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 972  cctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgta 913

                                    
Query: 481  cacccgagcacgcagagcaccgaa 504
            ||||||||||||||||||||||||
Sbjct: 912  cacccgagcacgcagagcaccgaa 889
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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  541 bits (273), Expect = e-151
 Identities = 277/279 (99%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7305 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 7246

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7245 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 7186

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7185 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 7126

                                                                        
Query: 406  ccgcgagttcaccagcctcttgccaatgttctcgattccggnagagccgacccacttgcg 465
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 7125 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 7066

                                                   
Query: 466  cacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||| |||||||||||||||||||||||||||||||||
Sbjct: 7065 cacctcatcgtcgtacacccgagcacgcagagcaccgaa 7027



 Score =  432 bits (218), Expect = e-118
 Identities = 225/228 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatgggtatactnaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 60
            |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7752 aatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgcttgg 7693

                                                                        
Query: 61   atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7692 atgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaaggt 7633

                                                                        
Query: 121  gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7632 gtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtc 7573

                                                            
Query: 181  ggtgcaaccttncggcacgggcaaagtaccttgctgtgctcctttacc 228
            ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7572 ggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 7525



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 302  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 361
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 362  ttctcgactgtcatctttggctgctcgaa 390
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 451  gccgacccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||||||  |||||||||||||| || ||||| || |||||
Sbjct: 3812 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaa 3759
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>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  541 bits (273), Expect = e-151
 Identities = 277/279 (99%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1363

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1303

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 1243

                                                                        
Query: 406  ccgcgagttcaccagcctcttgccaatgttctcgattccggnagagccgacccacttgcg 465
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1242 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 1183

                                                   
Query: 466  cacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1182 cacctcatcgtcgtacacccgagcacgcagagcaccgaa 1144



 Score =  377 bits (190), Expect = e-101
 Identities = 225/232 (96%), Gaps = 4/232 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatgggtatactnaatat-atttagagatatattaacaaaacatgcccagcaatcgcttg 59
            |||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 aatgggtatacacaatattatttagagatatattaacaaaacatgcccagcaatcgcttg 1643

                                                                        
Query: 60   gatgcgatgcggacttag-gtaggtaaaacatcagatattaaaagtggcatgcttaaaag 118
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 gatgcgatgcggacttagtgtaggtaaaacatcagatattaaaagtggcatgcttaaaag 1583

                                                                        
Query: 119  gtgtaaaggcagctgccg-tcgtcgctccttgccgttgggtcgtagttcttggcattttg 177
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 gtgtaaaggcagctgccgttcgtcgctccttgccgttgggtcgtagttcttggcattttg 1523

                                                                
Query: 178  gtcggtgcaaccttncggca-cgggcaaagtaccttgctgtgctcctttacc 228
            |||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 1522 gtcggtgcaaccttccggcatcgggcaaagtaccttgctgtgctcctttacc 1471
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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  531 bits (268), Expect = e-148
 Identities = 370/405 (91%)
 Strand = Plus / Minus

                                                                        
Query: 100  aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 159
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 160  gtagttcttggcattttggtcggtgcaaccttncggcacgggcaaagtaccttgctgtgc 219
            | ||||||||||||   ||||||| ||||||| |||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                                                                        
Query: 220  tcctttaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgc 279
            |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 1369 tcctttaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgc 1310

                                                                        
Query: 280  ctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgag 339
            |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1309 ctggctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaag 1250

                                                                        
Query: 340  catgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacggg 399
            |||||| |||||||| |||| |||||| || |||||||| |||||||||||||| |||||
Sbjct: 1249 catgtggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacggg 1190

                                                                        
Query: 400  cccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggnagagccgaccca 459
             ||||||||||||||||||||||||||||| |||||||| |||||||  ||    |||||
Sbjct: 1189 tccgtcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacaccca 1130

                                                         
Query: 460  cttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            |||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 1129 cttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaa 1085
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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  462 bits (233), Expect = e-127
 Identities = 267/279 (95%)
 Strand = Plus / Minus

                                                                       
Query: 226 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 227

                                                                       
Query: 286 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 167

                                                                       
Query: 346 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
           |||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 166 cccgtactctagcagcttctcgactgtcatctttggctgctcaaaggtcactggtccgtc 107

                                                                       
Query: 406 ccgcgagttcaccagcctcttgccaatgttctcgattccggnagagccgacccacttgcg 465
           |||||||||||| ||| ||||||||||||||||||| |||| ||||   |||||||||||
Sbjct: 106 ccgcgagttcacaagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 47

                                                  
Query: 466 cacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
           |||||  ||||||||||||||||||||||||||||||||
Sbjct: 46  cacctcgtcgtcgtacacccgagcacgcagagcaccgaa 8
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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  454 bits (229), Expect = e-124
 Identities = 266/279 (95%)
 Strand = Plus / Minus

                                                                       
Query: 226 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 accgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 433

                                                                       
Query: 286 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 373

                                                                       
Query: 346 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
           ||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 372 cccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcactggtccgtc 313

                                                                       
Query: 406 ccgcgagttcaccagcctcttgccaatgttctcgattccggnagagccgacccacttgcg 465
           |||||||||||||||| ||||||||||||||||||| |||| ||||   |||||||||||
Sbjct: 312 ccgcgagttcaccagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 253

                                                  
Query: 466 cacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
           |||||  ||||||||||||||||||||||||||||||||
Sbjct: 252 cacctcgtcgtcgtacacccgagcacgcagagcaccgaa 214



 Score =  240 bits (121), Expect = 4e-60
 Identities = 188/208 (90%), Gaps = 7/208 (3%)
 Strand = Plus / Minus

                                                                       
Query: 27  atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 80
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 746 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 687

                                                                       
Query: 81  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 140
           | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 686 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 628

                                                                       
Query: 141 cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttncggcacgg 200
           | ||||| |||||||||||| ||||||||||| | ||||||||||| |||  ||| || |
Sbjct: 627 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 568

                                       
Query: 201 gcaaagtaccttgctgtgctcctttacc 228
           ||||||||||||||||||| ||||||||
Sbjct: 567 gcaaagtaccttgctgtgcccctttacc 540
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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  454 bits (229), Expect = e-124
 Identities = 266/279 (95%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 accgtagaaggtaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1283

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1223

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
            ||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||
Sbjct: 1222 cccgtactctagcagcttctccactgtcatctttggctgctcaaaggtcactggtccgtc 1163

                                                                        
Query: 406  ccgcgagttcaccagcctcttgccaatgttctcgattccggnagagccgacccacttgcg 465
            |||||||||||||||| ||||||||||||||||||| |||| ||||   |||||||||||
Sbjct: 1162 ccgcgagttcaccagcttcttgccaatgttctcgataccggtagaggtcacccacttgcg 1103

                                                   
Query: 466  cacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            |||||  ||||||||||||||||||||||||||||||||
Sbjct: 1102 cacctcgtcgtcgtacacccgagcacgcagagcaccgaa 1064



 Score =  240 bits (121), Expect = 4e-60
 Identities = 188/208 (90%), Gaps = 7/208 (3%)
 Strand = Plus / Minus

                                                                        
Query: 27   atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 80
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 81   ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 140
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 141  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttncggcacgg 200
            | ||||| |||||||||||| ||||||||||| | ||||||||||| |||  ||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                        
Query: 201  gcaaagtaccttgctgtgctcctttacc 228
            ||||||||||||||||||| ||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacc 1390
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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  367 bits (185), Expect = 2e-98
 Identities = 255/279 (91%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1353 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1294

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1293 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1234

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1233 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1174

                                                                        
Query: 406  ccgcgagttcaccagcctcttgccaatgttctcgattccggnagagccgacccacttgcg 465
            |||||||||||||||||||||||| |||||||| |||||||  ||    |||||||||||
Sbjct: 1173 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1114

                                                   
Query: 466  cacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||| | |||||||||||||||||||||||||||||||
Sbjct: 1113 cacctcaacgtcgtacacccgagcacgcagagcaccgaa 1075



 Score =  174 bits (88), Expect = 2e-40
 Identities = 170/195 (87%), Gaps = 7/195 (3%)
 Strand = Plus / Minus

                                                                        
Query: 41   catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 94
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 95   -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 153
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 154  tgggtcgtagttcttggcattttggtcggtgcaaccttncggcacgggcaaagtaccttg 213
            ||||||| ||||||||||||   ||||||| ||||||| |||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                           
Query: 214  ctgtgctcctttacc 228
             ||||||||||||||
Sbjct: 1413 ttgtgctcctttacc 1399
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  230 bits (116), Expect = 4e-57
 Identities = 279/333 (83%), Gaps = 3/333 (0%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                                                        
Query: 169  ggcattttggtcggtgcaaccttncggcacgggcaaagtac---cttgctgtgctccttt 225
            ||||    ||||||||||||||| |||||| ||||   |||   ||||||||||||||| 
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1311

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
             ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1310 cccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1251

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1250 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1191

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1190 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1131

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1130 cctcgagttcaccagcctcttgccaatgttctc 1098



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1081 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1032
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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  230 bits (116), Expect = 4e-57
 Identities = 279/333 (83%), Gaps = 3/333 (0%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                                                        
Query: 169  ggcattttggtcggtgcaaccttncggcacgggcaaagtac---cttgctgtgctccttt 225
            ||||    ||||||||||||||| |||||| ||||   |||   ||||||||||||||| 
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1346

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
             ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1345 cccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1286

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1285 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1226

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1225 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1166

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1165 cctcgagttcaccagcctcttgccaatgttctc 1133



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1116 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1067
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                          
Query: 109    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 169    ggcattttggtcggtgcaaccttncggcacgggca 203
              ||||    ||||||||||||||| |||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                          
Query: 226    accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
              |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 108310 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 108369

                                                                          
Query: 286    catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
              || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 108370 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 108429

                                                                          
Query: 346    cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
               |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 108430 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 108489

                                               
Query: 406    ccgcgagttcaccagcctcttgccaatgttctc 438
              || ||||||||||||||||||||||||||||||
Sbjct: 108490 cctcgagttcaccagcctcttgccaatgttctc 108522



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 127    gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 165
              ||||||||||||||||||||| || || |||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 112091



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 455    acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
              ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 108539 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 108588



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 410    gagttcaccagcctcttgccaatgttctc 438
              ||||||||||||||| |||| ||||||||
Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                         
Query: 109   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 169   ggcattttggtcggtgcaaccttncggcacgggca 203
             ||||    ||||||||||||||| |||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                         
Query: 226   accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
             |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 30187 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 30246

                                                                         
Query: 286   catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
             || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 30247 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 30306

                                                                         
Query: 346   cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
              |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 30307 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 30366

                                              
Query: 406   ccgcgagttcaccagcctcttgccaatgttctc 438
             || ||||||||||||||||||||||||||||||
Sbjct: 30367 cctcgagttcaccagcctcttgccaatgttctc 30399



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 127   gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 165
             ||||||||||||||||||||| || || |||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 33968



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 455   acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
             ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 30416 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 30465



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 410   gagttcaccagcctcttgccaatgttctc 438
             ||||||||||||||| |||| ||||||||
Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229
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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 169  ggcattttggtcggtgcaaccttncggcacgggca 203
            ||||    ||||||||||||||| |||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1315 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1256

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1255 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1196

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1195 tccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1136

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1135 cctcgagttcaccagcctcttgccaatgttctc 1103



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1086 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1037
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                            
Query: 109      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 169      ggcattttggtcggtgcaaccttncggcacgggca 203
                ||||    ||||||||||||||| |||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                            
Query: 226      accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
                |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 28303449 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 28303508

                                                                            
Query: 286      catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
                || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 28303509 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 28303568

                                                                            
Query: 346      cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
                 |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 28303569 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 28303628

                                                 
Query: 406      ccgcgagttcaccagcctcttgccaatgttctc 438
                || ||||||||||||||||||||||||||||||
Sbjct: 28303629 cctcgagttcaccagcctcttgccaatgttctc 28303661



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 127      gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 165
                ||||||||||||||||||||| || || |||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 28307230



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 455      acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
                ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 28303678 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28303727



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 410      gagttcaccagcctcttgccaatgttctc 438
                ||||||||||||||| |||| ||||||||
Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                               
Query: 169  ggcattttggtcggtgcaaccttncggcacgggca 203
            ||||    ||||||||||||||| |||||| ||||
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggca 1420



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1309 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1250

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1249 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1190

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1189 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1130

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1129 cctcgagttcaccagcctcttgccaatgttctc 1097



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1080 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1031
to top
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                               
Query: 169  ggcattttggtcggtgcaaccttncggcacgggca 203
            ||||    ||||||||||||||| |||||| ||||
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggca 1458



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1347 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1288

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1287 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1228

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1227 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1168

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1167 cctcgagttcaccagcctcttgccaatgttctc 1135



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1118 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1069
to top
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                               
Query: 169  ggcattttggtcggtgcaaccttncggcacgggca 203
            ||||    ||||||||||||||| |||||| ||||
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggca 1457



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1346 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1287

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1286 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1227

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1226 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1167

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1166 cctcgagttcaccagcctcttgccaatgttctc 1134



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1117 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1068
to top
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                               
Query: 169  ggcattttggtcggtgcaaccttncggcacgggca 203
            ||||    ||||||||||||||| |||||| ||||
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggca 1241



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1130 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1071

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1070 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1011

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1010 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 951

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 950  cctcgagttcaccagcctcttgccaatgttctc 918



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 455 acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
           ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 901 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 852
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                            
Query: 109      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 169      ggcattttggtcggtgcaaccttncggcacgggca 203
                ||||    ||||||||||||||| |||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Plus

                                                                            
Query: 226      accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
                |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 28285898 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 28285957

                                                                            
Query: 286      catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
                || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 28285958 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 28286017

                                                                            
Query: 346      cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
                 |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 28286018 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 28286077

                                                 
Query: 406      ccgcgagttcaccagcctcttgccaatgttctc 438
                || ||||||||||||||||||||||||||||||
Sbjct: 28286078 cctcgagttcaccagcctcttgccaatgttctc 28286110



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 127      gcagctgccgtcgtcgctccttgccgttgggtcgtagtt 165
                ||||||||||||||||||||| || || |||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagtt 28289679



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 455      acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
                ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 28286127 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28286176



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 410      gagttcaccagcctcttgccaatgttctc 438
                ||||||||||||||| |||| ||||||||
Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940
to top
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  127 bits (64), Expect = 4e-26
 Identities = 87/95 (91%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                               
Query: 169  ggcattttggtcggtgcaaccttncggcacgggca 203
            ||||    ||||||||||||||| |||||| ||||
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggca 1462



 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1351 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1292

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1291 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1232

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1231 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1172

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1171 cctcgagttcaccagcctcttgccaatgttctc 1139



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1122 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1073
to top
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                       
Query: 226 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
           |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 564 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 505

                                                                       
Query: 286 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
           || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 504 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 445

                                                                       
Query: 346 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
            |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 444 tccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 385

                                            
Query: 406 ccgcgagttcaccagcctcttgccaatgttctc 438
           || ||||||||||||||||||||||||||||||
Sbjct: 384 cctcgagttcaccagcctcttgccaatgttctc 352



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 455 acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
           ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 335 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 286
to top
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  121 bits (61), Expect = 2e-24
 Identities = 175/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 285
            |||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| |||
Sbjct: 1358 accgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgct 1299

                                                                        
Query: 286  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 345
            || |||    ||||| ||||||||||||||||| || ||||||||||  || ||||||| 
Sbjct: 1298 caagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgta 1239

                                                                        
Query: 346  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 405
             |||||||| |  ||||| ||||  |||||||| |||||||||||   |   || || ||
Sbjct: 1238 tccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctc 1179

                                             
Query: 406  ccgcgagttcaccagcctcttgccaatgttctc 438
            || ||||||||||||||||||||||||||||||
Sbjct: 1178 cctcgagttcaccagcctcttgccaatgttctc 1146



 Score =  111 bits (56), Expect = 2e-21
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 109  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                               
Query: 169  ggcattttggtcggtgcaaccttncggcacgggca 203
            ||||    ||||||||||||||| |||||| ||||
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggca 1469



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 455  acccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||  |||||||| || || ||||| ||||| |||||
Sbjct: 1129 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 1080
to top
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  119 bits (60), Expect = 9e-24
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 230  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 289
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1000 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 941

                                                                        
Query: 290  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 349
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 940  tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 881

                                                                        
Query: 350  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 409
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 880  tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 821

                                
Query: 410  gagttcaccagcctcttgcc 429
            ||||||||||||||||||||
Sbjct: 820  gagttcaccagcctcttgcc 801



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 119  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 178
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                         
Query: 179  tcggtgcaacctt 191
            ||||| |||||||
Sbjct: 1089 tcggtacaacctt 1077
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  119 bits (60), Expect = 9e-24
 Identities = 165/200 (82%)
 Strand = Plus / Minus

                                                                        
Query: 230  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 289
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 290  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 349
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 350  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 409
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                                
Query: 410  gagttcaccagcctcttgcc 429
            ||||||||||||||||||||
Sbjct: 1014 gagttcaccagcctcttgcc 995



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 119  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 178
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                         
Query: 179  tcggtgcaacctt 191
            ||||| |||||||
Sbjct: 1245 tcggtacaacctt 1233
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>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  115 bits (58), Expect = 1e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                       
Query: 115 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 174
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 175 ttggtcggtgcaaccttncggcacgggca 203
             ||||||||||||||| |||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 230  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 289
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1301 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1242

                                                                        
Query: 290  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 349
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1241 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1182

                                                                        
Query: 350  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 409
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1181 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1122

                             
Query: 410  gagttcaccagcctctt 426
            |||||||||||||||||
Sbjct: 1121 gagttcaccagcctctt 1105



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 119  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 178
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                         
Query: 179  tcggtgcaacctt 191
            ||||| |||||||
Sbjct: 1390 tcggtacaacctt 1378
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 160/197 (81%)
 Strand = Plus / Minus

                                                                        
Query: 230  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 289
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 290  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 349
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 350  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 409
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                             
Query: 410  gagttcaccagcctctt 426
            |||||||||||||||||
Sbjct: 984  gagttcaccagcctctt 968



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 119  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 178
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                         
Query: 179  tcggtgcaacctt 191
            ||||| |||||||
Sbjct: 1215 tcggtacaacctt 1203
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 164/203 (80%)
 Strand = Plus / Minus

                                                                        
Query: 302  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 361
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                                                        
Query: 362  ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 421
            |||||||  |||||||| ||||| ||||| |||   ||||| ||||  ||||| || |||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123

                                                                        
Query: 422  ctcttgccaatgttctcgattccggnagagccgacccacttgcgcacctnatcgtcgtac 481
            | ||||   ||||||||||  |||     ||||||||||||||||||||  |||||||||
Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 1063

                                   
Query: 482  acccgagcacgcagagcaccgaa 504
            ||||| || ||||| || |||||
Sbjct: 1062 acccgcgcccgcagcgcgccgaa 1040
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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 231 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 290
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 291 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 350
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 351 actctagcagcttctcgactgtcatctttggctgctcgaa 390
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 290
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 291  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 350
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 351  actctagcagcttctcgactgtcatctttggctgctcgaa 390
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155
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>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                       
Query: 109 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

               
Query: 169 ggca 172
           ||||
Sbjct: 75  ggca 72
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 290
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 291  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 350
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 351  actctagcagcttctcgactgtcatctttggctgctcgaa 390
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155
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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 302  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 361
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 362  ttctcgactgtcatctttggctgctcgaa 390
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 451  gccgacccacttgcgcacctnatcgtcgtacacccgagcacgcagagcaccgaa 504
            ||||||||||||||||||||  |||||||||||||| || ||||| || |||||
Sbjct: 1243 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaa 1190
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>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 248 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 307
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 308 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 363
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                           
Query: 109     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 169     ggcattttggtcggtgcaaccttncggcacgggca 203
               ||||    ||||||||||||||| |||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                         
Query: 109   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 168
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 169   ggcattttggtcggtgcaaccttncggcacgggca 203
             ||||    ||||||||||||||| |||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
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>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 259  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 318
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 319  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 378
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 379  tggctgctcgaa 390
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232
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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 251  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 300
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306
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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 264   catcacccagagctgcctggct 285
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254
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>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 14    aatatatttagagatatattaa 35
             ||||||||||||||||||||||
Sbjct: 67942 aatatatttagagatatattaa 67963
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>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    tatatttagagatatattaac 36
             |||||||||||||||||||||
Sbjct: 12315 tatatttagagatatattaac 12335
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>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    tatatttagagatatattaac 36
             |||||||||||||||||||||
Sbjct: 66387 tatatttagagatatattaac 66367
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 85      aaacatcagatattaaaagtg 105
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420
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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 302  agctgcacacgcttgacattgtcctgctc 330
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 85      aaacatcagatattaaaagtg 105
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365
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>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     aaacatcagatattaaaagtg 105
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423
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>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 16   tatatttagagatatattaac 36
            |||||||||||||||||||||
Sbjct: 6217 tatatttagagatatattaac 6197
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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  catcacccagagctgcctggctca 287
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565
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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 260  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 319
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 320  ttgtcctgctcctggacgagcatg 343
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263
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>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 gtcagcaagctgcacacgct 314
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223
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>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tcagatattaaaagtggcat 109
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077
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>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     tcagatattaaaagtggcat 109
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583
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>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    tcagatattaaaagtggcat 109
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911
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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  catcacccagagctgcctggctca 287
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aatatatttagagatatatt 33
             ||||||||||||||||||||
Sbjct: 30454 aatatatttagagatatatt 30473
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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    ttgacattgtcctgctcctg 333
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419
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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  catcacccagagctgcctggctca 287
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 118  ggtgtaaaggcagctgccgtcgtcgctc 145
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    aaacatgcccagcaatcgcttgga 61
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715
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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  catcacccagagctgcctggctca 287
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659
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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  catcacccagagctgcctggctca 287
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026
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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  catcacccagagctgcctggctca 287
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935
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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tggcatgcttaaaaggtgta 123
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254
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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    ttgacattgtcctgctcctg 333
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979
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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 264  catcacccagagctgcctggctca 287
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619
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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aatatatttagagatatatt 33
             ||||||||||||||||||||
Sbjct: 62504 aatatatttagagatatatt 62485
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>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 89     atcagatattaaaagtggcatgct 112
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,214,584
Number of Sequences: 3902068
Number of extensions: 3214584
Number of successful extensions: 60745
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 60458
Number of HSP's gapped (non-prelim): 244
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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