ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62i07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SLC2B_HUMAN (Q8NEV8) Slp homolog lacking C2 domains b (Exophilin-5) 30 2.1
2MAML2_HUMAN (Q8IZL2) Mastermind-like protein 2 (Mam-2) 29 2.7
3Y519_HAEIN (P44742) Hypothetical protein HI0519 28 6.1

>SLC2B_HUMAN (Q8NEV8) Slp homolog lacking C2 domains b (Exophilin-5)|
          Length = 1989

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +1

Query: 25   TPMNSQDERTSLLPSASPLKNHTRCKPVVPTNIYIHGRSTNTSIVDRXPLFG 180
            T  +S D  ++ LP +SP KN +   PVVP+      RS +    D+ P  G
Sbjct: 872  TSCDSLDLSSAALPDSSPSKNSSLDAPVVPSTTVFSRRSPS----DKDPSLG 919



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>MAML2_HUMAN (Q8IZL2) Mastermind-like protein 2 (Mam-2)|
          Length = 1153

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = +1

Query: 70   ASPLKNHTRCKPVVPTNIYIHGRS--TNTSIVDRXPLFGTVPCXTPTNWT*GAGPLQILR 243
            A+P+  HT   P        HG    + ++ V    ++G +PC  P  ++  +G  Q+ +
Sbjct: 830  ANPVSTHTILTPNSSLLSTSHGTRMPSLSTAVQNMGMYGNLPCNQPNTYSVTSGMNQLTQ 889

Query: 244  RRN--QSIAXKN 273
            +RN  Q +A +N
Sbjct: 890  QRNPKQLLANQN 901



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>Y519_HAEIN (P44742) Hypothetical protein HI0519|
          Length = 417

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 187 EQFRIRVXGRQCLCSSIDRGYIYLLVPLAYILCDS*EAKP 68
           E F I V G   +  S+  GY  + VPL Y++  S  A P
Sbjct: 167 ELFAIMVGGTASIAGSVMAGYAGMGVPLTYLIAASFMAAP 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,288,470
Number of Sequences: 219361
Number of extensions: 700958
Number of successful extensions: 1719
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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