>IRF4_HUMAN (Q15306) Interferon regulatory factor 4 (IRF-4)|
           (Lymphocyte-specific interferon regulatory factor)
           (LSIRF) (NF-EM5) (Multiple myeloma oncogene 1)
          Length = 451

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -3

Query: 319 FPNVPQCKTSSYIWPPNGRLWENYPCREEHPHV-W*LPLISGAR 191
           +P++P  +  +Y+ PP  R W +Y   + HP + +  P+  G R
Sbjct: 158 YPSLPAQQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTFGPR 201

>CDD_HAEDU (Q7VMJ6) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)|
           (CDA)
          Length = 299

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 306 HSAKLAATYGLLMAGSGKIIRVVKNIRMCGDCHSFLEHASAATGKEI 166
           H+ + A ++  L AG G I  +V N   CG C  F+   + AT  +I
Sbjct: 110 HAEQSAISHAWL-AGEGAISDMVVNCTPCGHCRQFMNELNTATTLQI 155

>ABC3G_LAGLA (Q694B8) DNA dC->dU-editing enzyme APOBEC-3G (EC 3.5.4.-)|
          Length = 381

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
 Frame = -3

Query: 310 VPQCKTSSYIWPPNGRLWENYPCR----------EEHPHVW*LPLISGARLCCYRKRDFS 161
           +P CK S   W  +   W   PC            EHP V     +S ARL CYRK+D+ 
Sbjct: 81  LPACKRSQITWFVS---WN--PCLYCVAKVAEFLAEHPKV--TLTVSTARLYCYRKKDWR 133

Query: 160 QRLEWVS 140
           + L  +S
Sbjct: 134 RALRKLS 140

>IRF4_MOUSE (Q64287) Interferon regulatory factor 4 (IRF-4)|
           (Lymphocyte-specific interferon regulatory factor)
           (LSIRF) (NF-EM5) (PU.1 interaction partner)
           (Transcriptional activator PIP)
          Length = 450

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -3

Query: 319 FPNVPQCKTSSYIWPPNGRLWENYPCREEHPHV 221
           + ++P  +  +Y+ PP+ R W +Y   + HP +
Sbjct: 158 YGSLPAQQVHNYMMPPHDRSWRDYAPDQSHPEI 190

>SYW_SULSO (Q97ZX0) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 380

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = -1

Query: 396 LECMKAGYEPDTTFVLHDVEEYQKRYFLMYHSAK------LAATYGL 274
           L+ +  G+ PD TF+  D E  +  Y +    AK      + AT+GL
Sbjct: 137 LDIIAVGFNPDKTFIFQDTEYIRNMYPITVKIAKKLTFSEVRATFGL 183

>RDRP_IAHTE (P16505) RNA-directed RNA polymerase catalytic subunit (EC|
           2.7.7.48) (Polymerase basic protein 1) (PB1)
           (RNA-directed RNA polymerase subunit P1)
          Length = 757

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
 Frame = +2

Query: 47  VSTVLQRHCKEVKIAMVPVYSLQEQIPALKI*NPFESL---TEISFPVAAEACSRNEWQS 217
           V T+ +R C++++ + +PV   +++     +     +    TE+SF +  +    NE Q+
Sbjct: 255 VETLARRICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSFTITGDNTKWNENQN 314

Query: 218 PHMRMFFTTRIIFPEPAIRR------PYVAASFALWYIRKYLF*YSSTSCRTKVVSG 370
           P M +   T I   +P   R      P + ++      + Y+F   S   RT++ +G
Sbjct: 315 PRMFLAMITYITRNQPEWFRNVLSIAPIMFSNKMARLGKGYMFESKSMKLRTQIPAG 371

>SYW_SULTO (Q976M1) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 381

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = -1

Query: 396 LECMKAGYEPDTTFVLHDVEEYQKRYFLMYHSAK------LAATYGL 274
           L+ +  G+ PD TF+  D E  +  Y +    AK      + AT+GL
Sbjct: 138 LDIIAVGFNPDKTFIFQDTEYIRNMYPIAIKIAKKLTFSEVRATFGL 184

>SYA_RICFE (Q4UJT5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 878

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
 Frame = -1

Query: 327 KRYFLMYHSAKLAATYGLLMAG--SGKIIRVVKNIRM--------CGDCHS-FLEHASAA 181
           K Y  +YH+ + AA+Y   +AG    +IIR+  N           CG C   F +H    
Sbjct: 126 KLYVTVYHTDEEAASYWKKIAGFRDDRIIRIKTNDNFWSMGDTGPCGPCSEIFYDHGEQI 185

Query: 180 TGKEISVRDSNG 145
            G     +D +G
Sbjct: 186 YGGLPGTKDEDG 197

>SYW_SULAC (Q4JBG7) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 381

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = -1

Query: 396 LECMKAGYEPDTTFVLHDVEEYQKRYFLMYHSAK------LAATYGL 274
           L+ +  G++P+ TF+  D E  +  Y L    AK      + AT+GL
Sbjct: 138 LDIIAVGFDPNKTFIFQDTEYIKNMYPLSVKIAKKLTFNEVRATFGL 184

>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
 Frame = -1

Query: 309 YHSAKLAATYGLLMAGSGKIIRVVKNIRMCGDC-------HSFLEHASAATGKEISVRD 154
           +H AK+     +++ G+G  +R   ++    D        +S LEH +  +G+E+++R+
Sbjct: 190 FHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRE 248

>AROB_THIDN (Q30RT3) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 349

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = -1

Query: 408 DVLTLECMKAGYEPDTTFVLHDVEEYQKRYFLMYHSAKLAATYGLLMAGSGKII 247
           + L ++ +   Y   TT+ + DV+ + + +FL   S+  A T+ +L  G G ++
Sbjct: 277 EALRVKALLQKYNLPTTYAIKDVKAFYEAFFLDKKSSDSAITF-ILPLGIGDVV 329

>Y191_CLOAB (Q97MK5) Putative HTH-type transcriptional regulator CAC0191|
          Length = 283

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -1

Query: 339 EEYQKRYFLMYHSAKLAATYGLLMAGSGKIIRVVKNIRMCGDCHSFLEHASAATGKEISV 160
           E   K Y + ++   + A+Y + M    K +R+ KN+R   D H  +E AS     +++V
Sbjct: 126 EAISKAYRVDFYG--IGASYIVAMDAFQKFMRINKNVRATPDTHLQVEFASNLKKGDVAV 183


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,941,693
Number of Sequences: 219361
Number of extensions: 1279270
Number of successful extensions: 2803
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2803
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)