ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62i01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate al... 170 2e-39
2gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
4dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
5dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
6gb|AY103557.1| Zea mays PCO070710 mRNA sequence 131 2e-27
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
8dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolas... 131 2e-27
9gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds 115 1e-22
10dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 7e-21
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
13emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 107 3e-20
14gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like ... 50 0.006
15gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complet... 46 0.089
16gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA,... 46 0.089
17gb|AY106811.1| Zea mays PCO109530 mRNA sequence 44 0.35
18ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldo... 42 1.4
19gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map... 42 1.4
20gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140... 42 1.4
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Co... 42 1.4
23emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Co... 42 1.4
24emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Co... 42 1.4
25emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Co... 42 1.4
26gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete s... 42 1.4
27dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
28emb|AL672020.5| Mouse DNA sequence from clone RP23-185A3 on chro... 42 1.4
29gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H... 40 5.5
30gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 5.5
31gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete... 40 5.5
32gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete... 40 5.5
33gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete... 40 5.5
34emb|AJ131865.1|BNA131865 Brassica napus acc1.2 gene, exons 1-32 40 5.5
35emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in ... 40 5.5
36ref|NM_173273.1| Danio rerio digestive-organ expansion factor (d... 40 5.5
37gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complet... 40 5.5
38gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, re... 40 5.5
39gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.5
40gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRN... 40 5.5
41gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59... 40 5.5
42gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 ... 40 5.5 
>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1577

 Score =  170 bits (86), Expect = 2e-39
 Identities = 101/106 (95%)
 Strand = Plus / Minus

                                                                        
Query: 307  gatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcg 366
            ||||||||||||||||||||||||||||||  ||| ||||| || |||||||||||||||
Sbjct: 1267 gatcagtagctgtagttcttgacgaacatgccctccttggcggccgcggcctcgccgtcg 1208

                                                          
Query: 367  ctggtgtacttgccgagctgcgccagggagttggccttggcgcgca 412
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 ctggtgtacttgccgagctgcgccagggagttggccttggcgcgca 1162



 Score =  153 bits (77), Expect = 5e-34
 Identities = 97/101 (96%), Gaps = 2/101 (1%)
 Strand = Plus / Minus

                                                                        
Query: 166  gtccatctcttccatcagagctggtctcgacctgtaa-caacgacgacacactggctggc 224
            |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 1400 gtccatctct-ccatcagagctggtctcgacctgtaaacaacgaggacacactgcctggc 1342

                                                     
Query: 225  taaggtgccctcaagctgctcaaggcgctactagcactctc 265
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 taaggtgccctcaagctgctcaaggcgctactagcactctc 1301
to top
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 305   cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 364
             ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 63349 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 63408

                                                           
Query: 365   cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
             |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 63409 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 63454
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                           
Query: 305     cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 364
               ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 3469394 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3469453

                                                             
Query: 365     cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
               |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3469454 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 3469499
to top
>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full
            insert sequence
          Length = 1492

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                        
Query: 305  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 364
            ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 1265 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1206

                                                          
Query: 365  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1205 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1160
to top
>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full
            insert sequence
          Length = 1622

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                        
Query: 305  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 364
            ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 1261 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1202

                                                          
Query: 365  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1201 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1156
to top
>gb|AY103557.1| Zea mays PCO070710 mRNA sequence
          Length = 1761

 Score =  131 bits (66), Expect = 2e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                        
Query: 311  agtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctgg 370
            |||||||||||||||||||||||||   ||| |||||  | |||||||||||||||  ||
Sbjct: 1404 agtagctgtagttcttgacgaacattccctccttggcctcggcggcctcgccgtcggagg 1345

                                                      
Query: 371  tgtacttgccgagctgcgccagggagttggccttggcgcgca 412
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 tgtacttgccgagctgcgccagggagttggccttggcgcgca 1303
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                           
Query: 305     cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 364
               ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 3478098 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3478157

                                                             
Query: 365     cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
               |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3478158 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 3478203
to top
>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp
          Length = 2915

 Score =  131 bits (66), Expect = 2e-27
 Identities = 96/106 (90%)
 Strand = Plus / Minus

                                                                        
Query: 305  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 364
            ||||| |||||  |||||||||||||||||||  ||| |||||  | |||||||||||||
Sbjct: 2793 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 2734

                                                          
Query: 365  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2733 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 2688
to top
>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds
          Length = 1302

 Score =  115 bits (58), Expect = 1e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                        
Query: 305  cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 364
            ||||| |||||  |||||||||||||||||||   || |||||  | ||||| |||||||
Sbjct: 1157 cggattagtagacgtagttcttgacgaacatgccttccttggcctcggcggcttcgccgt 1098

                                                          
Query: 365  cgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
            |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1097 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1052
to top
>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score =  109 bits (55), Expect = 7e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                       
Query: 352  gcggcctcgccgtcgctggtgtacttgccgagctgcgccagggagttggccttggcgcg 410
            ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1209 gcggcctcgccgtcgctggtgtacttgccgagctgcgccagcgagttggccttggcgcg 1151
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  107 bits (54), Expect = 3e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                           
Query: 309     tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 368
               ||||||| ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 3543513 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543454

                                             
Query: 369     ggtgtacttgccgagctgcgccagggagtt 398
               |||||||||||||||||||||||| |||||
Sbjct: 3543453 ggtgtacttgccgagctgcgccagcgagtt 3543424
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  107 bits (54), Expect = 3e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                           
Query: 309     tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 368
               ||||||| ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 3543458 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543399

                                             
Query: 369     ggtgtacttgccgagctgcgccagggagtt 398
               |||||||||||||||||||||||| |||||
Sbjct: 3543398 ggtgtacttgccgagctgcgccagcgagtt 3543369
to top
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score =  107 bits (54), Expect = 3e-20
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                         
Query: 309   tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 368
             ||||||| ||||||||||||||||||||  |||  ||||  | |||||||||||||||||
Sbjct: 58441 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 58382

                                           
Query: 369   ggtgtacttgccgagctgcgccagggagtt 398
             |||||||||||||||||||||||| |||||
Sbjct: 58381 ggtgtacttgccgagctgcgccagcgagtt 58352
to top
>gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like protein mRNA,
            complete cds
          Length = 1552

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 370  gtgtacttgccgagctgcgccagggagttggccttggcgcg 410
            ||||||||||| ||||| || || |||||||||||||||||
Sbjct: 1260 gtgtacttgccaagctgagcaagtgagttggccttggcgcg 1220
to top
>gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complete sequence
          Length = 165247

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 27    ttcatatacttacttacttaggg 49
             |||||||||||||||||||||||
Sbjct: 43256 ttcatatacttacttacttaggg 43278
to top
>gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA, partial sequence
          Length = 584

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 369 ggtgtacttgccgagctgcgccagggagttggccttggc 407
           ||||||||||||||| || ||||| |||||||| |||||
Sbjct: 305 ggtgtacttgccgagttgagccagagagttggcgttggc 267
to top
>gb|AY106811.1| Zea mays PCO109530 mRNA sequence
          Length = 1545

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 379  ccgagctgcgccagggagttggccttggcgcgca 412
            |||||||| ||||| ||||||||||| |||||||
Sbjct: 1174 ccgagctgggccagcgagttggcctttgcgcgca 1141
to top
>ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G01140 mRNA,
            complete cds
          Length = 1515

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ttgccgagctgcgccagggagttggcctt 404
            ||||||||||| ||||| |||||||||||
Sbjct: 1253 ttgccgagctgggccagtgagttggcctt 1225
to top
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete
            sequence
          Length = 94029

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 376  ttgccgagctgcgccagggagttggcctt 404
            ||||||||||| ||||| |||||||||||
Sbjct: 4669 ttgccgagctgggccagtgagttggcctt 4697
to top
>gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140/F10A8.2) mRNA, complete cds
          Length = 1470

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ttgccgagctgcgccagggagttggcctt 404
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 33       tacttacttacttagggtggcaaacaaag 61
                |||||||||||||||||  ||||||||||
Sbjct: 17686289 tacttacttacttagggatgcaaacaaag 17686261
to top
>emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZH02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1377

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ttgccgagctgcgccagggagttggcctt 404
            ||||||||||| ||||| |||||||||||
Sbjct: 1195 ttgccgagctgggccagtgagttggcctt 1167
to top
>emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 329

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 376 ttgccgagctgcgccagggagttggcctt 404
           ||||||||||| ||||| |||||||||||
Sbjct: 88  ttgccgagctgggccagtgagttggcctt 60
to top
>emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS67ZB05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1391

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ttgccgagctgcgccagggagttggcctt 404
            ||||||||||| ||||| |||||||||||
Sbjct: 1187 ttgccgagctgggccagtgagttggcctt 1159
to top
>emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB38ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 262

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 376 ttgccgagctgcgccagggagttggcctt 404
           ||||||||||| ||||| |||||||||||
Sbjct: 37  ttgccgagctgggccagtgagttggcctt 9
to top
>gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete sequence
          Length = 1469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 376  ttgccgagctgcgccagggagttggcctt 404
            ||||||||||| ||||| |||||||||||
Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
to top
>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_F08
          Length = 134988

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 33    tacttacttacttagggtggcaaacaaag 61
             |||||||||||||||||  ||||||||||
Sbjct: 90322 tacttacttacttagggatgcaaacaaag 90294
to top
>emb|AL672020.5| Mouse DNA sequence from clone RP23-185A3 on chromosome X, complete
             sequence
          Length = 200613

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    ttgttcatatacttacttact 44
             |||||||||||||||||||||
Sbjct: 61739 ttgttcatatacttacttact 61759
to top
>gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H14, complete sequence
          Length = 118437

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   acatgttctctttggcagct 351
             ||||||||||||||||||||
Sbjct: 27603 acatgttctctttggcagct 27584
to top
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    acatgttctctttggcagct 351
              ||||||||||||||||||||
Sbjct: 323939 acatgttctctttggcagct 323958
to top
>gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete sequence
          Length = 168850

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aacaaaggcaacaacaacgc 74
              ||||||||||||||||||||
Sbjct: 155801 aacaaaggcaacaacaacgc 155820
to top
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence
          Length = 171563

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   ggcaaacaaaggcaacaaca 70
            ||||||||||||||||||||
Sbjct: 2560 ggcaaacaaaggcaacaaca 2541
to top
>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence
          Length = 199043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     ggcaaacaaaggcaacaaca 70
              ||||||||||||||||||||
Sbjct: 155393 ggcaaacaaaggcaacaaca 155374
to top
>emb|AJ131865.1|BNA131865 Brassica napus acc1.2 gene, exons 1-32
          Length = 12660

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   ggcgcttgagattgttcata 32
            ||||||||||||||||||||
Sbjct: 6987 ggcgcttgagattgttcata 7006
to top
>emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in linkage group 13,
             complete sequence
          Length = 89710

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   gcagtaaaaccattccaaag 125
             ||||||||||||||||||||
Sbjct: 12372 gcagtaaaaccattccaaag 12353
to top
>ref|NM_173273.1| Danio rerio digestive-organ expansion factor (def), mRNA
          Length = 2445

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  gcagtaaaaccattccaaag 125
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
to top
>gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complete cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  gcagtaaaaccattccaaag 125
            ||||||||||||||||||||
Sbjct: 1694 gcagtaaaaccattccaaag 1713
to top
>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone
              BACR36D15, complete sequence
          Length = 159513

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aacaaaggcaacaacaacgc 74
              ||||||||||||||||||||
Sbjct: 129529 aacaaaggcaacaacaacgc 129510
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 230     tgccctcaagctgctcaagg 249
               ||||||||||||||||||||
Sbjct: 2164719 tgccctcaagctgctcaagg 2164738
to top
>gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRNA (cDNA clone
            MGC:63753 IMAGE:2640310), complete cds
          Length = 2466

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  gcagtaaaaccattccaaag 125
            ||||||||||||||||||||
Sbjct: 1673 gcagtaaaaccattccaaag 1692
to top
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete
              sequence
          Length = 224889

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     ggcaaacaaaggcaacaaca 70
              ||||||||||||||||||||
Sbjct: 175887 ggcaaacaaaggcaacaaca 175868
to top
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete
             sequence
          Length = 300896

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aacaaaggcaacaacaacgc 74
             ||||||||||||||||||||
Sbjct: 87427 aacaaaggcaacaacaacgc 87408


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,845,549
Number of Sequences: 3902068
Number of extensions: 2845549
Number of successful extensions: 73946
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73777
Number of HSP's gapped (non-prelim): 163
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top