>gb|AC155717.4| Mus musculus 10 BAC RP24-126J1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166594

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 463   cagaaaactttttaaagatgtcat 486
             ||||||||||||||||||||||||
Sbjct: 20688 cagaaaactttttaaagatgtcat 20711

>gb|AC159328.9| Mus musculus 10 BAC RP23-216F23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 211853

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 463   cagaaaactttttaaagatgtcat 486
             ||||||||||||||||||||||||
Sbjct: 69833 cagaaaactttttaaagatgtcat 69856

>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete sequence
          Length = 223142

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 219   aaaattagttgatttccaagat 240
             ||||||||||||||||||||||
Sbjct: 50993 aaaattagttgatttccaagat 51014

>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence
          Length = 186860

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 219    aaaattagttgatttccaagat 240
              ||||||||||||||||||||||
Sbjct: 143691 aaaattagttgatttccaagat 143712

>emb|AL139382.12| Human DNA sequence from clone RP11-86N24 on chromosome 13 Contains the
              TNFSF11 gene for tumor necrosis factor (ligand)
              superfamily, member 11 and a CpG island, complete sequence
          Length = 200724

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 463    cagaaaactttttaaagatgtc 484
              ||||||||||||||||||||||
Sbjct: 174026 cagaaaactttttaaagatgtc 174047

>emb|AL138735.7| Human DNA sequence from clone RP1-321B9 on chromosome 6p12.2-21.2
             Contains part of the TReP-132 gene for zinc finger
             transcription protein, complete sequence
          Length = 83557

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 355   atatattgttaggcaaaagaa 375
             |||||||||||||||||||||
Sbjct: 44934 atatattgttaggcaaaagaa 44954

>dbj|BS000040.1| Pan troglodytes chromosome 22 clone:PTB-075B06, map 22, complete
             sequences
          Length = 172697

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 463   cagaaaactttttaaagatgtcatt 487
             |||||||||||||||| ||||||||
Sbjct: 25206 cagaaaactttttaaatatgtcatt 25182

>gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, complete sequence
          Length = 171837

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    acatcaacaacatgacagaaa 37
             |||||||||||||||||||||
Sbjct: 52784 acatcaacaacatgacagaaa 52764

>gb|AY773285.1| Human enterovirus 90 isolate F950027, complete genome
          Length = 7438

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   tgtaccaaaagcatcaccaa 88
            ||||||||||||||||||||
Sbjct: 3832 tgtaccaaaagcatcaccaa 3813

>gb|BC085075.1| Xenopus laevis NK3 transcription factor related, locus 1
            (Drosophila), mRNA (cDNA clone MGC:97890 IMAGE:6317935),
            complete cds
          Length = 2287

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  tcttgtctgcttgctataga 403
            ||||||||||||||||||||
Sbjct: 1494 tcttgtctgcttgctataga 1475

>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0038F07, complete sequence
          Length = 175703

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   aatgacaccacatatatttt 333
             ||||||||||||||||||||
Sbjct: 33720 aatgacaccacatatatttt 33739

>gb|AC185523.2| Pan troglodytes chromosome X clone PTB-124O20 map human ortholog p11.3,
              complete sequence
          Length = 209530

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    atataaagaattgctcaaaa 298
              ||||||||||||||||||||
Sbjct: 197999 atataaagaattgctcaaaa 198018

>ref|XM_452381.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C04125g predicted mRNA
          Length = 1275

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 ttgatttccaagattgccag 246
           ||||||||||||||||||||
Sbjct: 292 ttgatttccaagattgccag 273

>gb|AC122230.4| Mus musculus BAC clone RP23-133F23 from 9, complete sequence
          Length = 183554

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 216  tggaaaattagttgatttccaaga 239
            ||||||||||||||||||| ||||
Sbjct: 4484 tggaaaattagttgatttcaaaga 4507

>gb|BC047968.1| Xenopus laevis NK3 transcription factor related, locus 1
            (Drosophila), mRNA (cDNA clone MGC:53041 IMAGE:5537411),
            complete cds
          Length = 2393

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 384  tcttgtctgcttgctataga 403
            ||||||||||||||||||||
Sbjct: 1600 tcttgtctgcttgctataga 1581

>ref|XM_644349.1| Entamoeba histolytica HM-1:IMSS ABC transporter (302.t00002)  partial
            mRNA
          Length = 4119

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 467  aaactttttaaagatgtcattcaa 490
            ||||||||||||||||| ||||||
Sbjct: 2038 aaactttttaaagatgtaattcaa 2061

>emb|AL590364.5| Human DNA sequence from clone RP11-342D14 on chromosome X Contains the
             3' end of a novel gene, complete sequence
          Length = 65644

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   atataaagaattgctcaaaa 298
             ||||||||||||||||||||
Sbjct: 47795 atataaagaattgctcaaaa 47814

>emb|AL389888.8| Human DNA sequence from clone RP11-389K14 on chromosome 9 Contains
            two olfactory receptor pseudogenes and the 3' end of a
            novel gene, complete sequence
          Length = 202874

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 353  gtatatattgttaggcaaaagaaa 376
            ||||||||||||||| ||||||||
Sbjct: 3509 gtatatattgttagggaaaagaaa 3532

>ref|XM_964084.1| PREDICTED: Tribolium castaneum hypothetical protein LOC657637
           (LOC657637), mRNA
          Length = 3333

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 gaaaggtttgaaattatcga 133
           ||||||||||||||||||||
Sbjct: 871 gaaaggtttgaaattatcga 890

>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    ttgatttccaagattgccag 246
              ||||||||||||||||||||
Sbjct: 375999 ttgatttccaagattgccag 375980

>gb|AC119156.9| Mus musculus chromosome 1, clone RP24-534J20, complete sequence
          Length = 185873

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   gaaaactttttaaagatgtc 484
             ||||||||||||||||||||
Sbjct: 22668 gaaaactttttaaagatgtc 22649

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 314      aatgacaccacatatatttt 333
                ||||||||||||||||||||
Sbjct: 19315169 aatgacaccacatatatttt 19315188

>emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1047D15 of library RPCI-11
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 183418

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 318  acaccacatatattttctgaattc 341
            ||||||||||||||||||| ||||
Sbjct: 6495 acaccacatatattttctggattc 6518

>gb|AC118727.7| Mus musculus chromosome 9, clone RP24-166N8, complete sequence
          Length = 169165

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 216    tggaaaattagttgatttccaaga 239
              ||||||||||||||||||| ||||
Sbjct: 128721 tggaaaattagttgatttcaaaga 128744

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 314      aatgacaccacatatatttt 333
                ||||||||||||||||||||
Sbjct: 19474718 aatgacaccacatatatttt 19474737


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,820,117
Number of Sequences: 3902068
Number of extensions: 5820117
Number of successful extensions: 110270
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110150
Number of HSP's gapped (non-prelim): 120
length of query: 554
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 531
effective length of database: 17,143,297,704
effective search space: 9103091080824
effective search space used: 9103091080824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)