ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbah62h19 |
|---|---|
| Clone Library Name | barley_pub |
>DGKA_PIG (P20192) Diacylglycerol kinase alpha (EC 2.7.1.107) (Diglyceride| kinase alpha) (DGK-alpha) (DAG kinase alpha) (80 kDa diacylglycerol kinase) Length = 734 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 GHRLA+ I F K + M++DGEPW Q I+I+H+ Q+ ML P Sbjct: 675 GHRLAKCSEITFHTTKTLP----MQIDGEPWMQ------TPCTIKITHRNQMPMLVGPPP 724 Query: 361 KSKSF 347 +S +F Sbjct: 725 RSSNF 729
>DGKG_MOUSE (Q91WG7) Diacylglycerol kinase gamma (EC 2.7.1.107) (Diglyceride| kinase gamma) (DGK-gamma) (DAG kinase gamma) (88 kDa diacylglycerol kinase) Length = 788 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/75 (36%), Positives = 36/75 (48%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 G RLAQ + +K + M+VDGEPW QP I+I+H+ Q M+ P Sbjct: 724 GRRLAQCSSVTIRTNKLLP----MQVDGEPWMQP------QCTIKITHKNQAPMMMGPPQ 773 Query: 361 KSKSFSDPLLSHGQD 317 KS FS S +D Sbjct: 774 KSSFFSLRRKSRSKD 788
>DGKA_MOUSE (O88673) Diacylglycerol kinase alpha (EC 2.7.1.107) (Diglyceride| kinase alpha) (DGK-alpha) (DAG kinase alpha) (80 kDa diacylglycerol kinase) Length = 730 Score = 40.8 bits (94), Expect = 0.003 Identities = 24/65 (36%), Positives = 34/65 (52%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 GHRLA+ I F+ K + M++DGEPW Q I+I+H+ Q+ ML P Sbjct: 671 GHRLAKCSEITFQTTKTLP----MQIDGEPWMQA------PCTIKITHKNQMPMLMGPPS 720 Query: 361 KSKSF 347 S +F Sbjct: 721 NSYNF 725
>DGKG_RAT (P49620) Diacylglycerol kinase gamma (EC 2.7.1.107) (Diglyceride| kinase gamma) (DGK-gamma) (DAG kinase gamma) (88 kDa diacylglycerol kinase) Length = 788 Score = 40.4 bits (93), Expect = 0.003 Identities = 27/75 (36%), Positives = 36/75 (48%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 G RLAQ + K + M+VDGEPW QP +I+I+H+ Q M+ P Sbjct: 724 GRRLAQCSSVTIRTKKLLP----MQVDGEPWMQP------PCMIKITHKNQAPMMMGPPQ 773 Query: 361 KSKSFSDPLLSHGQD 317 KS FS S +D Sbjct: 774 KSSFFSLRRKSRSKD 788
>DGKG_HUMAN (P49619) Diacylglycerol kinase gamma (EC 2.7.1.107) (Diglyceride| kinase gamma) (DGK-gamma) (DAG kinase gamma) Length = 791 Score = 40.4 bits (93), Expect = 0.003 Identities = 27/75 (36%), Positives = 36/75 (48%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 G RLAQ + +K + M+VDGEPW QP I+I+H+ Q M+ P Sbjct: 727 GRRLAQCASVTIRTNKLLP----MQVDGEPWMQP------CCTIKITHKNQAPMMMGPPQ 776 Query: 361 KSKSFSDPLLSHGQD 317 KS FS S +D Sbjct: 777 KSSFFSLRRKSRSKD 791
>DGKA_RAT (P51556) Diacylglycerol kinase alpha (EC 2.7.1.107) (Diglyceride| kinase alpha) (DGK-alpha) (DAG kinase alpha) (80 kDa diacylglycerol kinase) Length = 727 Score = 38.1 bits (87), Expect = 0.017 Identities = 24/65 (36%), Positives = 33/65 (50%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 GHRLA+ I F+ K + M+VDGEPW Q I+I+H+ Q+ ML Sbjct: 668 GHRLAKCSEITFQTTKTLP----MQVDGEPWMQA------PCTIKITHKNQMPMLMGPAP 717 Query: 361 KSKSF 347 S +F Sbjct: 718 SSSNF 722
>DGK3_CAEEL (Q03603) Probable diacylglycerol kinase 3 (EC 2.7.1.107)| (Diglyceride kinase 3) (DGK-3) (DAG kinase 3) Length = 812 Score = 37.0 bits (84), Expect = 0.038 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = -2 Query: 535 RLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANE 368 RL+Q + + HK M++DGEPW QP +I+I+H+ Q ML E Sbjct: 730 RLSQCSTVVIQTHKSFP----MQIDGEPWMQP------PCIIQITHKNQAKMLVGE 775
>MVP1_YEAST (P40959) Sorting nexin MVP1| Length = 511 Score = 34.7 bits (78), Expect = 0.19 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Frame = -2 Query: 457 EPWK---QPLPKDDDTIVIEISHQGQVTMLANEPCKSKSFSDPLLSHGQDSHHNDHSDEH 287 +PW KDDD +V + + + ++ E + +FS PL D++ D Sbjct: 8 DPWNTSSNAWTKDDDHVVSTTNSEPSLNGISGE-FNTLNFSTPL-----DTNEEDTGFLP 61 Query: 286 KNDVDDEDEWEDGRRKFGAADTFKLPD 206 NDV +E W+D R GA + P+ Sbjct: 62 TNDVLEESIWDDSRNPLGATGMSQTPN 88
>UTX_HUMAN (O15550) Ubiquitously transcribed X chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the X chromosome) Length = 1401 Score = 34.7 bits (78), Expect = 0.19 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -2 Query: 403 SHQGQVTMLANEPCKSKSFSDPLLSHGQD-SHHNDHSDEHKNDVDDEDEWEDGRRKFGAA 227 S++ T+ ++ SF + L + SHH DHSD D+ GRR+ G Sbjct: 1025 SNRSHTTIAKYAQYQASSFQESLREENEKRSHHKDHSDSESTSSDN-----SGRRRKGPF 1079 Query: 226 DTFKLPDEIDIA 191 T K ID++ Sbjct: 1080 KTIKFGTNIDLS 1091
>DGKB_RAT (P49621) Diacylglycerol kinase beta (EC 2.7.1.107) (Diglyceride| kinase beta) (DGK-beta) (DAG kinase beta) (90 kDa diacylglycerol kinase) Length = 801 Score = 34.3 bits (77), Expect = 0.24 Identities = 22/65 (33%), Positives = 30/65 (46%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 G RLAQ + K + M++DGEPW Q I+I+H+ Q ML P Sbjct: 734 GRRLAQCSSVVIRTSKSLP----MQIDGEPWMQ------TPCTIKITHKNQAPMLMGPPP 783 Query: 361 KSKSF 347 K+ F Sbjct: 784 KTGLF 788
>CTR9_YEAST (P89105) Protein CTR9| Length = 1077 Score = 33.9 bits (76), Expect = 0.32 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = -2 Query: 433 KDDDTIVIEISH-QGQVTMLANEPCKSKSFSDPLLSHGQDSHHNDHSDEHKNDVDDED 263 +DDD +V + SH +G+ + L+NE + + +S G + + ND +DE+ ND DD D Sbjct: 1019 EDDDDVVKKPSHNKGKKSQLSNEFIEDSDEEEAQMS-GSEQNKNDDNDEN-NDNDDND 1074
>LTI78_ARATH (Q06738) Low-temperature-induced 78 kDa protein| (Desiccation-responsive protein 29A) Length = 710 Score = 33.5 bits (75), Expect = 0.42 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -2 Query: 412 IEISHQGQVTMLANEPCKSKSFSDPLLSHGQDSHHNDHSDEHKNDVDDEDEWE 254 +E G M ++K F + L HGQ + H D + D DD+DE E Sbjct: 19 VEHHENGATKMFRKVKARAKKFKNSLTKHGQSNEHEQDHDLVEED-DDDDELE 70
>UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the X chromosome) (Fragment) Length = 1333 Score = 33.5 bits (75), Expect = 0.42 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -2 Query: 403 SHQGQVTMLANEPCKSKSFSDPLLSHGQD-SHHNDHSDEHKNDVDDEDEWEDGRRKFGAA 227 S++ T+ ++ SF + L + SHH DHSD D+ G+R+ G Sbjct: 957 SNRSHTTIAKYAQYQASSFQESLREENEKRSHHKDHSDSESTSSDN-----SGKRRKGPF 1011 Query: 226 DTFKLPDEIDIA 191 T K ID++ Sbjct: 1012 KTIKFGTNIDLS 1023
>DGKB_HUMAN (Q9Y6T7) Diacylglycerol kinase beta (EC 2.7.1.107) (Diglyceride| kinase beta) (DGK-beta) (DAG kinase beta) (90 kDa diacylglycerol kinase) Length = 804 Score = 33.5 bits (75), Expect = 0.42 Identities = 22/65 (33%), Positives = 30/65 (46%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTFMRVDGEPWKQPLPKDDDTIVIEISHQGQVTMLANEPC 362 G RLAQ + K + M++DGEPW Q I+I+H+ Q ML P Sbjct: 737 GRRLAQCSCVVIRTSKSLP----MQIDGEPWMQ------TPCTIKITHKNQAPMLMGPPP 786 Query: 361 KSKSF 347 K+ F Sbjct: 787 KTGLF 791
>DGK1_DROME (Q01583) Diacylglycerol kinase 1 (EC 2.7.1.107) (Diglyceride kinase| 1) (DGK 1) (DAG kinase 1) Length = 1020 Score = 32.3 bits (72), Expect = 0.93 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Frame = -2 Query: 541 GHRLAQTHRIRFEFHKGVVDHTF-MRVDGEPWKQPLPKDDDTIVIEISHQGQVTML-ANE 368 G RLAQ + + K TF M++DGEPW Q +P I+++H+ QV ML A Sbjct: 959 GRRLAQCSEVIIKTKK-----TFPMQIDGEPWMQ-MP-----CTIKVTHKNQVPMLMAPR 1007 Query: 367 PCKSKSFSDPLLS 329 K + F + L S Sbjct: 1008 SEKGRGFFNLLCS 1020
>RBM13_BRARE (Q6NYD4) MAK16-like protein RBM13 (RNA binding motif protein 13)| Length = 303 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = -2 Query: 349 FSDPLLSHGQDSHHNDHSDEHKNDVDDEDEWEDGRRKFGAADTFKLPDEIDIAHLS 182 ++ P+ + + D E + + ++EDE E G R+F A D F+ D D L+ Sbjct: 179 YNFPINAFDKAMEKQDEESESEEEEEEEDEEESGTREFIAEDEFEESDLSDFEELN 234
>BFR2_NEUCR (Q7S6P8) Protein bfr-2| Length = 636 Score = 32.0 bits (71), Expect = 1.2 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -2 Query: 334 LSHGQDSHHNDHSDEHKNDVDDEDEWEDGRRKFGAADTFKLPDEIDI 194 L + D ++ + D DDED+ EDG + G ++ F PD D+ Sbjct: 85 LEESDEEDFEDEEEDDEEDDDDEDDLEDGESETG-SEEFADPDTADL 130
>LAS1L_HUMAN (Q9Y4W2) LAS1-like protein| Length = 734 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/59 (30%), Positives = 28/59 (47%) Frame = -2 Query: 397 QGQVTMLANEPCKSKSFSDPLLSHGQDSHHNDHSDEHKNDVDDEDEWEDGRRKFGAADT 221 QG V + E + K + L ++ ND +E + D DDED+ E+ R + G T Sbjct: 558 QGSVNDVKEEEKEEK---EVLPDQVEEEEENDDQEEEEEDEDDEDDEEEDRMEVGPFST 613
>CHSD_EMENI (P78611) Chitin synthase D (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase D) (Class-V chitin synthase D) Length = 1184 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -2 Query: 358 SKSFSDPLLSHGQDSHHNDHSDEHKNDVDDEDEWEDGRRK 239 S S +DP S HH HS H++D+D+E E G R+ Sbjct: 33 SLSNNDPT-SPRHHRHHRSHSSRHQHDIDEERAEEGGIRR 71
>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (SBP)| Length = 279 Score = 31.2 bits (69), Expect = 2.1 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -2 Query: 328 HGQDSHHNDHSDEHKNDVDDEDE 260 HG + NDH D+H +D DD+++ Sbjct: 178 HGDKDNDNDHDDDHDDDDDDKED 200
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +2 Query: 410 NDNSVIVLWEGLLPRFPIDPHERVVHHAFVELETDPV 520 N S +V G+ P +PI+PH R HH+ +PV Sbjct: 373 NQQSFVV---GMGPNYPINPHHRAAHHSTTNDINNPV 406
>UBF1_MOUSE (P25976) Nucleolar transcription factor 1 (Upstream-binding factor| 1) (UBF-1) Length = 765 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -2 Query: 322 QDSHHNDHSDEHKNDVDDEDEWEDGRRKFGAADTFKLPDEID 197 +D ND D+ ++D DD+DE ED + ++ + D D Sbjct: 720 EDGDENDDDDDDEDDEDDDDEDEDNESEGSSSSSSSSGDSSD 761
>NRIP1_HUMAN (P48552) Nuclear receptor-interacting protein 1 (Nuclear factor| RIP140) (Receptor-interacting protein 140) Length = 1158 Score = 30.4 bits (67), Expect = 3.5 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 222 PSSFLMRLTLLISAELHIHSYDKDHILSVHN 130 PS +L LL+S+E H+ Y ++H L N Sbjct: 259 PSVACSQLALLLSSEAHLQQYSREHALKTQN 289
>ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer-binding protein| 2 (HIV-EP2) (MHC-binding protein 2) (MBP-2) Length = 2446 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 349 FSDPLLSHGQDSHHNDHSDEHKNDVDDEDE 260 FSD S G+D ND DE ++D DD+ + Sbjct: 1897 FSDAEESDGEDGDDNDDDDEDEDDFDDQGD 1926
>NRIP1_MOUSE (Q8CBD1) Nuclear receptor-interacting protein 1 (Nuclear factor| RIP140) (Receptor-interacting protein 140) Length = 1161 Score = 30.4 bits (67), Expect = 3.5 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 222 PSSFLMRLTLLISAELHIHSYDKDHILSVHN 130 PS +L LL+S+E H+ Y ++H L N Sbjct: 260 PSVACSQLALLLSSEAHLQQYSREHALKTQN 290
>ZEP2_RAT (Q00900) Human immunodeficiency virus type I enhancer-binding protein| 2 homolog (DNA-binding protein AGIE-BP1) (Angiotensinogen gene-inducible enhancer-binding protein 1) (Myc intron-binding protein 1) Length = 2437 Score = 30.0 bits (66), Expect = 4.6 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 349 FSDPLLSHGQDSHHNDHSDEHKNDVDDEDE 260 FSD S G+D ND DE +D DD+ + Sbjct: 1888 FSDAEESDGEDGDDNDEDDEDDDDFDDQGD 1917
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 30.0 bits (66), Expect = 4.6 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Frame = -1 Query: 524 DPQDP-FRVPQ----RRGGPHVHEGRWGTVEAAPPKGR*HY-CH*DLTPRTGDHASQRAL 363 DP+DP FR + RRG P HEGR APP+GR + D P AS+ A Sbjct: 1090 DPEDPRFRGRREESFRRGAPPRHEGR------APPRGRDGFPGPEDFGPEENFDASEEAA 1143 Query: 362 QVKELQ 345 + ++L+ Sbjct: 1144 RGRDLR 1149
>TRA1_DROME (Q8I8U7) Transcription-associated protein 1 (dTRA1)| Length = 3805 Score = 30.0 bits (66), Expect = 4.6 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = +3 Query: 429 SFGRGCFHGSPSTLMNVWSTTPLWNSKRIL 518 SFGRG HG+ ++ + +T P+W +++ Sbjct: 3217 SFGRGASHGNIPSINPIKATPPMWRCSKVM 3246
>RBM13_HUMAN (Q9BXY0) MAK16-like protein RBM13 (RNA binding motif protein 13)| (NNP78) Length = 300 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = -2 Query: 322 QDSHHNDHSDEHKNDVDDEDEWEDGRRKF---GAADTFKLPDEIDIAHL 185 Q +D SD + D DD+DE + G+R+F G D + D D+ L Sbjct: 192 QQEAESDSSDTEEKDDDDDDEEDVGKREFVEDGEVDESDISDFEDMDKL 240
>NADM_PYRKO (Q5JEF8) Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1)| (NAD(+) pyrophosphorylase) (NAD(+) diphosphorylase) (NMN adenylyltransferase) Length = 188 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = -2 Query: 502 FHKGVVDHTFMR---VDGEPWKQPLPKDDDTIVIEISHQGQVTMLA-NEPCKSKSFSDPL 335 F K ++ T +R V+GEPW++ +P+ + EI ++ MLA N K P+ Sbjct: 124 FRKDILSATEIRRRMVEGEPWEELVPRSVAEFIREIKGVERIKMLATNLESSEKELQAPI 183
>ZEP2_MOUSE (Q3UHF7) Human immunodeficiency virus type I enhancer-binding protein| 2 homolog (Myc intron-binding protein 1) (MIBP-1) Length = 2430 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 349 FSDPLLSHGQDSHHNDHSDEHKNDVDDEDE 260 FSD S G+D ND DE +D DD+ + Sbjct: 1881 FSDAEESDGEDGDDNDDDDEDDDDFDDQGD 1910
>SWR1_DEBHA (Q6BKC2) Helicase SWR1 (EC 3.6.1.-)| Length = 1616 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%) Frame = -2 Query: 430 DDDTIVIEISHQ--------GQVTMLANEPCKSKSFSDPLLSHGQDSHHNDHSDEHKNDV 275 DDD+ V E +H+ G +L N P + + S+ +S D + +D DE+ + Sbjct: 675 DDDSEVDESNHKQVDSTKPTGLAALLGNGPTEDEEDSNDDVSADSDGNVSD--DENMSTT 732 Query: 274 DDEDE 260 D+EDE Sbjct: 733 DEEDE 737
>MSL1_DROME (P50535) Protein male-specific lethal-1| Length = 1039 Score = 29.3 bits (64), Expect = 7.9 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 15/84 (17%) Frame = -2 Query: 457 EPWKQPLPKDDDTIVIEISHQGQVTMLANEPCKSKSFSDPLLS---------------HG 323 E K+ + +++D +V E H + E F D L S HG Sbjct: 299 EAHKEQISQEEDQLVAEEDHLHMQEVHTEEVVGGDIFHDALESIEMEVVTEELVDMEEHG 358 Query: 322 QDSHHNDHSDEHKNDVDDEDEWED 251 Q N H +E ++ D++DE D Sbjct: 359 QSVDANGHIEEDDDEDDEDDENSD 382
>ZN330_HUMAN (Q9Y3S2) Zinc finger protein 330 (Nucleolar cysteine-rich protein)| (Nucleolar autoantigen 36) Length = 320 Score = 29.3 bits (64), Expect = 7.9 Identities = 11/29 (37%), Positives = 22/29 (75%) Frame = -2 Query: 328 HGQDSHHNDHSDEHKNDVDDEDEWEDGRR 242 +G S+H++ DE++ + DDE+E ++GR+ Sbjct: 262 YGDTSYHDEEEDEYEAE-DDEEEEDEGRK 289
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 29.3 bits (64), Expect = 7.9 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 Query: 316 SHHNDHSDEHKNDVDDEDEWED 251 S D D+ + D +D+DEWED Sbjct: 480 SSDEDEDDDDEEDFEDDDEWED 501
>POU50_BRARE (Q90482) POU domain protein ZP-50| Length = 368 Score = 29.3 bits (64), Expect = 7.9 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 12/55 (21%) Frame = -2 Query: 385 TMLANEPCKSKSFSDPLL----SHGQD--------SHHNDHSDEHKNDVDDEDEW 257 TML+ +P DPL SH SHH DHSDE DD +++ Sbjct: 144 TMLSPQPSLHHGLRDPLHDDAGSHDNQMESPQQPFSHHQDHSDEDAPSSDDLEQF 198
>MA8J_SCHJA (P13525) Immunogenic miracidial antigen 8I'| Length = 139 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 7/38 (18%) Frame = -2 Query: 352 SFSDPLLSHGQ-------DSHHNDHSDEHKNDVDDEDE 260 SFS P++S GQ D H D ++ +DVDD D+ Sbjct: 49 SFSSPVISTGQHIDVGDEDYHDGDDDVDYTDDVDDVDD 86
>MA8I_SCHJA (P13524) Immunogenic miracidial antigen 8I| Length = 139 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 7/38 (18%) Frame = -2 Query: 352 SFSDPLLSHGQ-------DSHHNDHSDEHKNDVDDEDE 260 SFS P++S GQ D H D ++ +DVDD D+ Sbjct: 49 SFSSPVISTGQHIDVGDEDYHDGDDDVDYTDDVDDVDD 86
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 29.3 bits (64), Expect = 7.9 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = -2 Query: 430 DDDTIVIEISH-QGQVTMLANEPCKSKSFSDPLLSHGQDSHHNDHSDEHKNDVDDEDEWE 254 D + V+EI+ +G+ T P K+KS ++ +D D DE ++D +++DE + Sbjct: 210 DSEEEVMEITTAKGKKTPAKVVPMKAKSVAEE-----EDDEEEDEDDEDEDDEEEDDEDD 264 Query: 253 D 251 D Sbjct: 265 D 265
>MA8C_SCHJA (P13523) Immunogenic miracidial antigen 8C (Fragment)| Length = 95 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 7/38 (18%) Frame = -2 Query: 352 SFSDPLLSHGQ-------DSHHNDHSDEHKNDVDDEDE 260 SFS P++S GQ D H D ++ +DVDD D+ Sbjct: 5 SFSSPVISTGQHIDVGDEDYHDGDDDVDYTDDVDDVDD 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,618,980 Number of Sequences: 219361 Number of extensions: 1420013 Number of successful extensions: 5170 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4708 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5100 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
