Clone Name | rbah62h19 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_480362.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 155 bits (78), Expect = 2e-34 Identities = 159/186 (85%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||||||||||||||| |||||||| ||||| || |||| |||||||| Sbjct: 1515 gctcttcgacttgcagggctcgttggcaagcatggtgacctgaccaaggtgggagatctc 1456 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | |||| ||||| || || |||||||||||||||||||| || |||||||||| ||| Sbjct: 1455 cacaacaacggtgtcgtcatcttttgggaggggctgcttccatggctccccatcgatcct 1396 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtgggtctgtgc 529 |||||| ||||| || | |||||||||||||||||||||||||||| |||| ||| || Sbjct: 1395 catgaaggtgtgctctgctgcgcctttgtggaactcgaaacggatcctttgggcctgcgc 1336 Query: 530 aaggcg 535 |||||| Sbjct: 1335 aaggcg 1330 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 179 tcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaa 238 ||||||||| ||||||||||||| ||| ||||| | |||||| ||||||||||| ||||| Sbjct: 1683 tcagctgaggtgagcaatgtcaacctcgtcagggatcttgaatgtatctgcggcaccaaa 1624 Query: 239 cttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||||||||||||||||||||||| ||||| |||| Sbjct: 1623 cttcctcctgccatcctcccactcatcttcgtcctcca 1586
>dbj|AK066600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071I18, full insert sequence Length = 1940 Score = 155 bits (78), Expect = 2e-34 Identities = 159/186 (85%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||||||||||||||| |||||||| ||||| || |||| |||||||| Sbjct: 1514 gctcttcgacttgcagggctcgttggcaagcatggtgacctgaccaaggtgggagatctc 1455 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | |||| ||||| || || |||||||||||||||||||| || |||||||||| ||| Sbjct: 1454 cacaacaacggtgtcgtcatcttttgggaggggctgcttccatggctccccatcgatcct 1395 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtgggtctgtgc 529 |||||| ||||| || | |||||||||||||||||||||||||||| |||| ||| || Sbjct: 1394 catgaaggtgtgctctgctgcgcctttgtggaactcgaaacggatcctttgggcctgcgc 1335 Query: 530 aaggcg 535 |||||| Sbjct: 1334 aaggcg 1329 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 179 tcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaa 238 ||||||||| ||||||||||||| ||| ||||| | |||||| ||||||||||| ||||| Sbjct: 1682 tcagctgaggtgagcaatgtcaacctcgtcagggatcttgaatgtatctgcggcaccaaa 1623 Query: 239 cttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||||||||||||||||||||||| ||||| |||| Sbjct: 1622 cttcctcctgccatcctcccactcatcttcgtcctcca 1585
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 145 bits (73), Expect = 2e-31 Identities = 148/173 (85%) Strand = Plus / Plus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||||||||||||||| |||||||| ||||| || |||| |||||||| Sbjct: 4593833 gctcttcgacttgcagggctcgttggcaagcatggtgacctgaccaaggtgggagatctc 4593892 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | |||| ||||| || || |||||||||||||||||||| || |||||||||| ||| Sbjct: 4593893 cacaacaacggtgtcgtcatcttttgggaggggctgcttccatggctccccatcgatcct 4593952 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtggg 522 |||||| ||||| || | |||||||||||||||||||||||||||| |||| Sbjct: 4593953 catgaaggtgtgctctgctgcgcctttgtggaactcgaaacggatcctttggg 4594005 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 179 tcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaa 238 ||||||||| ||||||||||||| ||| ||||| | |||||| ||||||||||| ||||| Sbjct: 4593665 tcagctgaggtgagcaatgtcaacctcgtcagggatcttgaatgtatctgcggcaccaaa 4593724 Query: 239 cttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||||||||||||||||||||||| ||||| |||| Sbjct: 4593725 cttcctcctgccatcctcccactcatcttcgtcctcca 4593762
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_C08 Length = 150300 Score = 145 bits (73), Expect = 2e-31 Identities = 148/173 (85%) Strand = Plus / Plus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||||||||||||||| |||||||| ||||| || |||| |||||||| Sbjct: 117681 gctcttcgacttgcagggctcgttggcaagcatggtgacctgaccaaggtgggagatctc 117740 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | |||| ||||| || || |||||||||||||||||||| || |||||||||| ||| Sbjct: 117741 cacaacaacggtgtcgtcatcttttgggaggggctgcttccatggctccccatcgatcct 117800 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtggg 522 |||||| ||||| || | |||||||||||||||||||||||||||| |||| Sbjct: 117801 catgaaggtgtgctctgctgcgcctttgtggaactcgaaacggatcctttggg 117853 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 179 tcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaa 238 ||||||||| ||||||||||||| ||| ||||| | |||||| ||||||||||| ||||| Sbjct: 117513 tcagctgaggtgagcaatgtcaacctcgtcagggatcttgaatgtatctgcggcaccaaa 117572 Query: 239 cttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||||||||||||||||||||||| ||||| |||| Sbjct: 117573 cttcctcctgccatcctcccactcatcttcgtcctcca 117610
>dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577G06 Length = 58137 Score = 145 bits (73), Expect = 2e-31 Identities = 148/173 (85%) Strand = Plus / Plus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||||||||||||||| |||||||| ||||| || |||| |||||||| Sbjct: 8338 gctcttcgacttgcagggctcgttggcaagcatggtgacctgaccaaggtgggagatctc 8397 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | |||| ||||| || || |||||||||||||||||||| || |||||||||| ||| Sbjct: 8398 cacaacaacggtgtcgtcatcttttgggaggggctgcttccatggctccccatcgatcct 8457 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtggg 522 |||||| ||||| || | |||||||||||||||||||||||||||| |||| Sbjct: 8458 catgaaggtgtgctctgctgcgcctttgtggaactcgaaacggatcctttggg 8510 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 179 tcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaa 238 ||||||||| ||||||||||||| ||| ||||| | |||||| ||||||||||| ||||| Sbjct: 8170 tcagctgaggtgagcaatgtcaacctcgtcagggatcttgaatgtatctgcggcaccaaa 8229 Query: 239 cttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||||||||||||||||||||||| ||||| |||| Sbjct: 8230 cttcctcctgccatcctcccactcatcttcgtcctcca 8267
>gb|DQ237915.1| Oryza sativa (indica cultivar-group) diacylglycerol kinase 1 (DGK1) mRNA, complete cds Length = 1788 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||| || ||| |||| |||||||| ||||| | |||| |||||||| Sbjct: 1409 gctcttcgacttgcacgggtcgctggcgagcatggtgacctgacggaggtgagagatctc 1350 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | ||| | |||||||||||||| || || ||||||||||| || |||||||||| ||| Sbjct: 1349 gacgaccacggtgtcatcgtccttgggaagaggctgcttccatggctccccatcgatcct 1290 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtgggtctgtgc 529 |||||||||||| || | | ||||||||||||||||| ||||| || |||| |||||| Sbjct: 1289 catgaacgtgtgctcggctgctcctttgtggaactcgaaccggattctatgggcctgtgc 1230 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 176 agctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgcc 235 ||||||||| || ||||||| |||| ||||||||| | |||||| ||||| || || || Sbjct: 1571 agctcagctaaggtgagcaacatcaacctcatcagggaacttgaacgtatcagctgcacc 1512 Query: 236 aaacttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||| |||| || |||||||||||||| ||||| |||| Sbjct: 1511 aaacttcttcctcccctcctcccactcatcttcgtcctcca 1471
>ref|XM_474019.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||| || ||| |||| |||||||| ||||| | |||| |||||||| Sbjct: 1341 gctcttcgacttgcacgggtcgctggcgagcatggtgacctgacggaggtgagagatctc 1282 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | ||| | |||||||||||||| || || ||||||||||| || |||||||||| ||| Sbjct: 1281 gacgaccacggtgtcatcgtccttgggaagaggctgcttccatggctccccatcgatcct 1222 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtgggtctgtgc 529 |||||||||||| || | | ||||||||||||||||| ||||| || |||| |||||| Sbjct: 1221 catgaacgtgtgctcggctgctcctttgtggaactcgaaccggattctatgggcctgtgc 1162 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 179 tcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaa 238 |||||| || ||||||| |||| ||||||||| | |||||| ||||| || || ||||| Sbjct: 1500 tcagctaaggtgagcaacatcaacctcatcagggaacttgaacgtatcagctgcaccaaa 1441 Query: 239 cttcctcctgccatcctcccactcatcctcgtcatcca 276 |||| |||| || |||||||||||||| ||||| |||| Sbjct: 1440 cttcttcctcccctcctcccactcatcttcgtcctcca 1403
>dbj|AK100906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132D04, full insert sequence Length = 1965 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||| || ||| |||| |||||||| ||||| | |||| |||||||| Sbjct: 1634 gctcttcgacttgcacgggtcgctggcgagcatggtgacctgacggaggtgagagatctc 1575 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | ||| | |||||||||||||| || || ||||||||||| || |||||||||| ||| Sbjct: 1574 gacgaccacggtgtcatcgtccttgggaagaggctgcttccatggctccccatcgatcct 1515 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtgggtctgtgc 529 |||||||||||| || | | ||||||||||||||||| ||||| || |||| |||||| Sbjct: 1514 catgaacgtgtgctcggctgctcctttgtggaactcgaaccggattctatgggcctgtgc 1455 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 176 agctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgcc 235 ||||||||| || ||||||| |||| ||||||||| | |||||| ||||| || || || Sbjct: 1796 agctcagctaaggtgagcaacatcaacctcatcagggaacttgaacgtatcagctgcacc 1737 Query: 236 aaacttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||| |||| || |||||||||||||| ||||| |||| Sbjct: 1736 aaacttcttcctcccctcctcccactcatcttcgtcctcca 1696
>gb|AY105536.1| Zea mays PCO106687 mRNA sequence Length = 1925 Score = 103 bits (52), Expect = 6e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 176 agctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgcc 235 |||||| |||| |||||||||||||||||| ||||||| ||| || |||||||| || || Sbjct: 1680 agctcaactgaaatgagcaatgtcaatctcgtcaggaatcttaaatgtatctgccgcccc 1621 Query: 236 aaacttcctcctgccatcctcccactcatcctcgtc 271 ||||||||||||||| ||||||||||| || ||||| Sbjct: 1620 aaacttcctcctgccgtcctcccactcgtcttcgtc 1585 Score = 103 bits (52), Expect = 6e-19 Identities = 166/204 (81%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| ||| |||| ||||| || ||||||||||| ||||| || |||| ||||| || Sbjct: 1515 gctcttggacctgcacggctcatttgctagcatggtgacctgcccaaggtgagagatttc 1456 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | |||| |||||||||||||| || |||||||||||||| || || || || ||||| Sbjct: 1455 caccacaaccgtgtcatcgtccttgggaaggggctgcttccagggctctccgtcaaccct 1396 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcctgtgggtctgtgc 529 |||||||||||| || | ||||||||||||| || || |||||||| |||| ||| || Sbjct: 1395 catgaacgtgtgctctgctgcgcctttgtggaattcaaagcggatcctatgggcctgggc 1336 Query: 530 aaggcgatggccgtgcccattagg 553 || |||| |||||| |||||||| Sbjct: 1335 aatgcgagtgccgtgtccattagg 1312
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 97.6 bits (49), Expect = 4e-17 Identities = 136/165 (82%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||| || ||| |||| |||||||| ||||| | |||| |||||||| Sbjct: 94600 gctcttcgacttgcacgggtcgctggcgagcatggtgacctgacggaggtgagagatctc 94541 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | ||| | |||||||||||||| || || ||||||||||| || |||||||||| ||| Sbjct: 94540 gacgaccacggtgtcatcgtccttgggaagaggctgcttccatggctccccatcgatcct 94481 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggat 514 |||||||||||| || | | ||||||||||||||||| ||||| Sbjct: 94480 catgaacgtgtgctcggctgctcctttgtggaactcgaaccggat 94436 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 176 agctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgcc 235 ||||||||| || ||||||| |||| ||||||||| | |||||| ||||| || || || Sbjct: 94762 agctcagctaaggtgagcaacatcaacctcatcagggaacttgaacgtatcagctgcacc 94703 Query: 236 aaacttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||| |||| || |||||||||||||| ||||| |||| Sbjct: 94702 aaacttcttcctcccctcctcccactcatcttcgtcctcca 94662
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 97.6 bits (49), Expect = 4e-17 Identities = 136/165 (82%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||| || ||| |||| |||||||| ||||| | |||| |||||||| Sbjct: 32325017 gctcttcgacttgcacgggtcgctggcgagcatggtgacctgacggaggtgagagatctc 32324958 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | ||| | |||||||||||||| || || ||||||||||| || |||||||||| ||| Sbjct: 32324957 gacgaccacggtgtcatcgtccttgggaagaggctgcttccatggctccccatcgatcct 32324898 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggat 514 |||||||||||| || | | ||||||||||||||||| ||||| Sbjct: 32324897 catgaacgtgtgctcggctgctcctttgtggaactcgaaccggat 32324853 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 176 agctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgcc 235 ||||||||| || ||||||| |||| ||||||||| | |||||| ||||| || || || Sbjct: 32325179 agctcagctaaggtgagcaacatcaacctcatcagggaacttgaacgtatcagctgcacc 32325120 Query: 236 aaacttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||| |||| || |||||||||||||| ||||| |||| Sbjct: 32325119 aaacttcttcctcccctcctcccactcatcttcgtcctcca 32325079
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 97.6 bits (49), Expect = 4e-17 Identities = 136/165 (82%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||| |||||||| || ||| |||| |||||||| ||||| | |||| |||||||| Sbjct: 37953 gctcttcgacttgcacgggtcgctggcgagcatggtgacctgacggaggtgagagatctc 37894 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | ||| | |||||||||||||| || || ||||||||||| || |||||||||| ||| Sbjct: 37893 gacgaccacggtgtcatcgtccttgggaagaggctgcttccatggctccccatcgatcct 37834 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggat 514 |||||||||||| || | | ||||||||||||||||| ||||| Sbjct: 37833 catgaacgtgtgctcggctgctcctttgtggaactcgaaccggat 37789 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 176 agctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgcc 235 ||||||||| || ||||||| |||| ||||||||| | |||||| ||||| || || || Sbjct: 38115 agctcagctaaggtgagcaacatcaacctcatcagggaacttgaacgtatcagctgcacc 38056 Query: 236 aaacttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||||| |||| || |||||||||||||| ||||| |||| Sbjct: 38055 aaacttcttcctcccctcctcccactcatcttcgtcctcca 38015
>gb|BT009313.1| Triticum aestivum clone wlm1.pk0027.g12:fis, full insert mRNA sequence Length = 1401 Score = 77.8 bits (39), Expect = 3e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 178 ctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaa 237 ||||||| ||||| |||||||| | ||||||||| | ||||||||| || || ||||||| Sbjct: 1148 ctcagctaagatgcgcaatgtcgacctcatcaggtaacttgaaggtgtccgcagcgccaa 1089 Query: 238 acttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||| |||| || |||| |||||| |||||||| |||| Sbjct: 1088 acttcttccttccctccttccactcgtcctcgtcctcca 1050 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 435 gggaggggctgcttccacggttccccatcgaccctcatgaacgtgtggtc 484 ||||| ||||||||||| || || || ||||||||||||||||||||||| Sbjct: 906 gggagtggctgcttccatggctcaccgtcgaccctcatgaacgtgtggtc 857
>gb|AY106320.1| Zea mays PCO122712 mRNA sequence Length = 1753 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 420 gtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccctcatgaacgtg 479 ||||| || ||||| ||||| ||||||||||| || ||||| |||| ||||||||||||| Sbjct: 1311 gtgtcgtcctccttggggagaggctgcttccatggctccccgtcgatcctcatgaacgtg 1252 Query: 480 tggtccaccacgcctttgtggaactcgaaacggat 514 || ||| | | || |||||||||||||||||||| Sbjct: 1251 tgctccgctgctcccttgtggaactcgaaacggat 1217 Score = 44.1 bits (22), Expect = 0.48 Identities = 76/94 (80%) Strand = Plus / Minus Query: 183 ctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaacttc 242 ||||||||||| ||||| | ||| || || | ||||||||| | || || || |||||| Sbjct: 1533 ctgagatgagcgatgtccacctcgtcggggatcttgaaggtggccgccgcaccgaacttc 1474 Query: 243 ctcctgccatcctcccactcatcctcgtcatcca 276 |||| || ||||||||||| |||||||| |||| Sbjct: 1473 ttcctcccgtcctcccactcgtcctcgtcctcca 1440
>gb|BT009326.1| Triticum aestivum clone wlm24.pk0016.f9:fis, full insert mRNA sequence Length = 1957 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Minus Query: 350 gctctttgacttgcagggctcgttggctagcatggtcacctgtccttggtgtgagatctc 409 |||||||||||||||| | ||||||| |||||||| ||||| | |||| |||||||| Sbjct: 1435 gctctttgacttgcagtggccgttggcgagcatggtgacctggcggaggtgggagatctc 1376 Query: 410 aatgacaatagtgtcatcgtcctttgggaggggctgcttccacggttccccatcgaccct 469 | ||| | || || |||| | ||||| ||||||||||| || || || |||||||| Sbjct: 1375 gacgacgacggtctcgtcgttgctggggagtggctgcttccatggctcgccgtcgaccct 1316 Query: 470 catgaacgtgtggtccaccacgcctttgtggaactcgaaacggatcct 517 ||||||||||||||| | | |||||||||||||| || |||||||| Sbjct: 1315 catgaacgtgtggtcggctgctcctttgtggaactcaaaccggatcct 1268 Score = 54.0 bits (27), Expect = 5e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 178 ctcagctgagatgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaa 237 ||||||| || || || ||||| | ||| ||||| | |||||||||||| || || |||| Sbjct: 1592 ctcagctaaggtgcgcgatgtcgacctcgtcaggtaacttgaaggtatccgcagccccaa 1533 Query: 238 acttcctcctgccatcctcccactcatcctcgtcatcca 276 ||||| |||| || |||| |||||| |||||||| |||| Sbjct: 1532 acttcttcctcccctccttccactcgtcctcgtcctcca 1494
>gb|BT013146.1| Lycopersicon esculentum clone 134141F, mRNA sequence Length = 1873 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 435 gggaggggctgcttccacggttccccatcgaccctcatgaacgtgtg 481 ||||| ||||||||||| ||||| ||||||| ||||||||||||||| Sbjct: 1314 gggagaggctgcttccatggttctccatcgatcctcatgaacgtgtg 1268
>ref|NM_127660.2| Arabidopsis thaliana diacylglycerol kinase AT2G20900 transcript variant AT2G20900.2 mRNA, complete cds Length = 1792 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1600 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1548
>ref|NM_201769.1| Arabidopsis thaliana diacylglycerol kinase AT2G20900 transcript variant AT2G20900.3 mRNA, complete cds Length = 1776 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1584 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1532
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete sequence Length = 129667 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 41894 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 41842
>emb|BX820488.1|CNS0AAEI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZG02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1793 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1639 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1587
>emb|BX819272.1|CNS0A9VJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZH04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1830 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1593 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1541
>emb|BX820937.1|CNS0A9P8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZB07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1579 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1522 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1470
>emb|BX821669.1|CNS0A939 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL63ZD12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1731 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1567 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1515
>emb|BX820227.1|CNS0A9E9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1642 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1455 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1403
>gb|AY085589.1| Arabidopsis thaliana clone 15863 mRNA, complete sequence Length = 1792 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||||||||||| |||||||||||| || || |||||||| Sbjct: 1600 tgagaaatatcaacctcatcaggaatcttgaaggtatccgcagcaccaaactt 1548
>gb|AY701399.1| Brassica juncea probable diacylglycerol kinase 1 mRNA, partial cds Length = 480 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 |||| ||| |||| ||| ||||||| ||||||||||||||| || |||||||| Sbjct: 281 tgagaaatatcaacctcgtcaggaatcttgaaggtatctgcagcaccaaactt 229
>ref|NM_001036304.1| Arabidopsis thaliana diacylglycerol kinase AT2G20900 transcript variant AT2G20900.4 mRNA, complete cds Length = 1854 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 203 ctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 ||||||||||| |||||||||||| || || |||||||| Sbjct: 1639 ctcatcaggaatcttgaaggtatccgcagcaccaaactt 1601
>ref|NM_179676.1| Arabidopsis thaliana diacylglycerol kinase AT2G20900 transcript variant AT2G20900.1 mRNA, complete cds Length = 1785 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 203 ctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 ||||||||||| |||||||||||| || || |||||||| Sbjct: 1570 ctcatcaggaatcttgaaggtatccgcagcaccaaactt 1532
>gb|BT000983.1| Arabidopsis thaliana clone U09362 putative diacylglycerol kinase (At2g20900) mRNA, complete cds Length = 1561 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 203 ctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 ||||||||||| |||||||||||| || || |||||||| Sbjct: 1452 ctcatcaggaatcttgaaggtatccgcagcaccaaactt 1414
>gb|AF360300.1| Arabidopsis thaliana putative diacylglycerol kinase (At2g20900) mRNA, complete cds Length = 1801 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 203 ctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 ||||||||||| |||||||||||| || || |||||||| Sbjct: 1570 ctcatcaggaatcttgaaggtatccgcagcaccaaactt 1532
>emb|BX820487.1|CNS0A9JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZF12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1683 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 203 ctcatcaggaagcttgaaggtatctgcggcgccaaactt 241 ||||||||||| |||||||||||| || || |||||||| Sbjct: 1508 ctcatcaggaatcttgaaggtatccgcagcaccaaactt 1470
>gb|AF198260.1|AF198260 Lycopersicon esculentum diacylglycerol kinase (Dgk1) gene, complete cds, alternatively spliced Length = 9300 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 441 ggctgcttccacggttccccatcgaccctcatgaa 475 ||||||||||| ||||||||||| | ||||||||| Sbjct: 7099 ggctgcttccagggttccccatcaatcctcatgaa 7065
>gb|AF198259.1|AF198259 Lycopersicon esculentum diacylglycerol kinase (DGK1) mRNA, complete cds Length = 1736 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 441 ggctgcttccacggttccccatcgaccctcatgaa 475 ||||||||||| ||||||||||| | ||||||||| Sbjct: 1232 ggctgcttccagggttccccatcaatcctcatgaa 1198
>gb|AF198258.1|AF198258 Lycopersicon esculentum calmodulin-binding diacylglycerol kinase (DGK1) mRNA, complete cds Length = 1845 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 441 ggctgcttccacggttccccatcgaccctcatgaa 475 ||||||||||| ||||||||||| | ||||||||| Sbjct: 1232 ggctgcttccagggttccccatcaatcctcatgaa 1198
>gb|AC123922.3| Mus musculus BAC clone RP24-198D1 from chromosome 1, complete sequence Length = 163727 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 gaatgtatatgcagctcagctg 185 |||||||||||||||||||||| Sbjct: 122594 gaatgtatatgcagctcagctg 122573
>gb|AC122198.2| Mus musculus BAC clone RP23-56F12 from 1, complete sequence Length = 180386 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 gaatgtatatgcagctcagctg 185 |||||||||||||||||||||| Sbjct: 23972 gaatgtatatgcagctcagctg 23951
>emb|Y14971.1|GGK60GENE Gallus gallus mRNA for K60 protein Length = 1445 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 ctttgtcataagaatgtatatg 174 |||||||||||||||||||||| Sbjct: 1236 ctttgtcataagaatgtatatg 1257
>emb|BX820929.1|CNS0A9NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1720 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Minus Query: 189 tgagcaatgtcaatctcatcaggaagcttgaaggtatc 226 |||| ||| |||| ||||||||||| |||||||||||| Sbjct: 1564 tgagaaatatcaacctcatcaggaatcttgaaggtatc 1527
>ref|NM_205018.1| Gallus gallus K60 protein (K60), mRNA Length = 1284 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 ctttgtcataagaatgtatatg 174 |||||||||||||||||||||| Sbjct: 1075 ctttgtcataagaatgtatatg 1096
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 tatcacttttctggacaaata 130 ||||||||||||||||||||| Sbjct: 2908446 tatcacttttctggacaaata 2908466
>gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, complete sequence Length = 293822 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 acaagatatggtctttgtcat 161 ||||||||||||||||||||| Sbjct: 214919 acaagatatggtctttgtcat 214939
>gb|AC019155.4| Homo sapiens BAC clone RP11-3B12 from 7, complete sequence Length = 176130 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tgataaataaaaatagctgat 67 ||||||||||||||||||||| Sbjct: 168464 tgataaataaaaatagctgat 168444
>emb|AL451010.4| Human DNA sequence from clone RP11-163M2 on chromosome 1 Contains a novel gene, a pseudogene similar to part of actin, beta (ACTB), the GLMN gene for glomulin, FKBP associated protein and a novel gene (FLJ13150), complete sequence Length = 184144 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gccatcctcccactcatcctc 268 ||||||||||||||||||||| Sbjct: 85886 gccatcctcccactcatcctc 85866
>emb|BX649273.3| Mouse DNA sequence from clone RP23-51F20 on chromosome 4, complete sequence Length = 31098 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 33 atacaaagttgcattgataaataaaaata 61 ||||||||||||||| ||||| ||||||| Sbjct: 5513 atacaaagttgcattaataaacaaaaata 5541
>gb|AC110907.7| Mus musculus chromosome 7, clone RP24-180J10, complete sequence Length = 179750 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ccatcctcccactcatcctc 268 |||||||||||||||||||| Sbjct: 59592 ccatcctcccactcatcctc 59611
>ref|NM_193146.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 tcctcccactcatcctcgtcatcc 275 ||||||| |||||||||||||||| Sbjct: 305 tcctccccctcatcctcgtcatcc 282
>gb|AC119856.13| Mus musculus chromosome 5, clone RP23-256B18, complete sequence Length = 218174 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ccatcctcccactcatcctc 268 |||||||||||||||||||| Sbjct: 179797 ccatcctcccactcatcctc 179778
>gb|AC114420.11| Mus musculus chromosome 5, clone RP23-375E13, complete sequence Length = 155958 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ccatcctcccactcatcctc 268 |||||||||||||||||||| Sbjct: 5194 ccatcctcccactcatcctc 5175
>gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, complete sequence Length = 211576 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 ctgcttccacggttccccat 462 |||||||||||||||||||| Sbjct: 199911 ctgcttccacggttccccat 199892
>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence Length = 176949 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ctgcttccacggttccccat 462 |||||||||||||||||||| Sbjct: 134853 ctgcttccacggttccccat 134872
>gb|AC116523.7| Mus musculus chromosome 9, clone RP24-349L11, complete sequence Length = 184012 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tggtcacctgtccttggtgt 401 |||||||||||||||||||| Sbjct: 109126 tggtcacctgtccttggtgt 109145
>emb|CR974447.12| Mouse DNA sequence from clone RP23-452G2 on chromosome 17, complete sequence Length = 139010 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 cctttgggaggggctgcttc 449 |||||||||||||||||||| Sbjct: 128705 cctttgggaggggctgcttc 128724
>gb|AC132598.3| Mus musculus BAC clone RP24-196M16 from chromosome 17, complete sequence Length = 162858 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 cctttgggaggggctgcttc 449 |||||||||||||||||||| Sbjct: 85804 cctttgggaggggctgcttc 85823
>emb|BX649590.15| Zebrafish DNA sequence from clone CH211-143I6 in linkage group 9, complete sequence Length = 120653 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 agctcagctgagatgagcaa 195 |||||||||||||||||||| Sbjct: 69450 agctcagctgagatgagcaa 69431
>gb|AC146719.32| Medicago truncatula clone mth2-17f11, complete sequence Length = 127364 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 agagtctgaatctatacaaa 39 |||||||||||||||||||| Sbjct: 91642 agagtctgaatctatacaaa 91661
>gb|AC117530.2| Homo sapiens chromosome 5 clone RP11-294P1, complete sequence Length = 172442 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 tttgtcataagaatgtatatgcag 177 |||||||||| ||||||||||||| Sbjct: 78330 tttgtcataataatgtatatgcag 78353
>gb|AC027670.6| Homo sapiens chromosome 10 clone RP11-176H12, complete sequence Length = 191805 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 ttgataaataaaaatagctgattt 69 |||||||||| ||||||||||||| Sbjct: 43083 ttgataaatagaaatagctgattt 43106
>dbj|AK170852.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630204N18 product:ATP-binding cassette, sub-family D (ALD), member 4, full insert sequence Length = 3699 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ctgcttccacggttccccat 462 |||||||||||||||||||| Sbjct: 84 ctgcttccacggttccccat 103
>gb|AC010411.7| Homo sapiens chromosome 5 clone CTD-2165P17, complete sequence Length = 177807 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 tttgtcataagaatgtatatgcag 177 |||||||||| ||||||||||||| Sbjct: 25632 tttgtcataataatgtatatgcag 25609
>emb|BX649598.17| Zebrafish DNA sequence from clone CH211-214P12 in linkage group 18, complete sequence Length = 213741 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ctcctgccatcctcccactc 262 |||||||||||||||||||| Sbjct: 117721 ctcctgccatcctcccactc 117702
>gb|AC010601.6| Homo sapiens chromosome 16 clone CTA-481E9, complete sequence Length = 110222 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gttgtggtggctatcttggc 324 |||||||||||||||||||| Sbjct: 51148 gttgtggtggctatcttggc 51129
>gb|AC008856.6|AC008856 Homo sapiens chromosome 5 clone CTD-2178N20, complete sequence Length = 154229 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 tttgtcataagaatgtatatgcag 177 |||||||||| ||||||||||||| Sbjct: 43218 tttgtcataataatgtatatgcag 43195
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcaatgtcaatctcatcag 210 |||||||||||||||||||| Sbjct: 31161858 agcaatgtcaatctcatcag 31161839 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 tcctcccactcatcctcgtcatcc 275 ||||||| |||||||||||||||| Sbjct: 18850202 tcctccccctcatcctcgtcatcc 18850179
>gb|BC067146.1| Danio rerio ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast), mRNA (cDNA clone MGC:76906 IMAGE:6524025), complete cds Length = 1580 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 agctcagctgagatgagcaa 195 |||||||||||||||||||| Sbjct: 1377 agctcagctgagatgagcaa 1396
>ref|NM_200921.2| Danio rerio ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) (ube2e3), mRNA Length = 1580 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 agctcagctgagatgagcaa 195 |||||||||||||||||||| Sbjct: 1377 agctcagctgagatgagcaa 1396
>gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone RP23-196F5, complete sequence Length = 181320 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cttcctcctgccatcctccc 258 |||||||||||||||||||| Sbjct: 120100 cttcctcctgccatcctccc 120081
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agcaatgtcaatctcatcag 210 |||||||||||||||||||| Sbjct: 88203 agcaatgtcaatctcatcag 88184
>dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1074C08 Length = 165701 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 tcctcccactcatcctcgtcatcc 275 ||||||| |||||||||||||||| Sbjct: 22592 tcctccccctcatcctcgtcatcc 22569
>dbj|AP004641.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1147B04 Length = 142956 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 tcctcccactcatcctcgtcatcc 275 ||||||| |||||||||||||||| Sbjct: 57213 tcctccccctcatcctcgtcatcc 57190
>emb|AL929215.18| Mouse DNA sequence from clone RP23-8L8 on chromosome 2, complete sequence Length = 159804 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 tgggtcactgaagctctttg 357 |||||||||||||||||||| Sbjct: 85854 tgggtcactgaagctctttg 85873
>dbj|AK063442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-F02, full insert sequence Length = 1661 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 tcctcccactcatcctcgtcatcc 275 ||||||| |||||||||||||||| Sbjct: 377 tcctccccctcatcctcgtcatcc 354
>emb|BX470162.9| Zebrafish DNA sequence from clone CH211-216L23 in linkage group 18, complete sequence Length = 215723 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ctcctgccatcctcccactc 262 |||||||||||||||||||| Sbjct: 155388 ctcctgccatcctcccactc 155369
>gb|AC171013.3| Gallus gallus BAC clone CH261-71N5 from chromosome ul, complete sequence Length = 196838 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 gctgagatgagcaatgtcaatctc 205 ||||||||||||| |||||||||| Sbjct: 108253 gctgagatgagcagtgtcaatctc 108230
>emb|BX004885.4| Zebrafish DNA sequence from clone CH211-103L6, complete sequence Length = 187201 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 ttgataaataaaaatagctgattt 69 |||||||| ||||||||||||||| Sbjct: 164183 ttgataaaaaaaaatagctgattt 164160
>gb|AC154277.1| Mus musculus BAC clone RP24-266G7 from 9, complete sequence Length = 168300 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tggtcacctgtccttggtgt 401 |||||||||||||||||||| Sbjct: 31457 tggtcacctgtccttggtgt 31476
>emb|AL683888.10| Mouse DNA sequence from clone RP23-462C12 on chromosome X, complete sequence Length = 200089 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ctgtgggtctgtgcaaggcg 535 |||||||||||||||||||| Sbjct: 196362 ctgtgggtctgtgcaaggcg 196381
>emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chromosome 11, complete sequence Length = 247743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cttcctcctgccatcctccc 258 |||||||||||||||||||| Sbjct: 19359 cttcctcctgccatcctccc 19340 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,184,031 Number of Sequences: 3902068 Number of extensions: 5184031 Number of successful extensions: 94418 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94106 Number of HSP's gapped (non-prelim): 298 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)