Clone Name | rbah62h18 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y5224_ARATH (Q94EG6) Protein At5g02240 | 33 | 0.52 | 2 | HISX_METJA (Q58851) Histidinol dehydrogenase (EC 1.1.1.23) (HDH) | 30 | 3.3 | 3 | Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor | 28 | 9.7 | 4 | K2C8_PROAT (Q5K2N3) Keratin, type II cytoskeletal 8 (Cytokeratin... | 28 | 9.7 |
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>Y5224_ARATH (Q94EG6) Protein At5g02240| Length = 253 Score = 32.7 bits (73), Expect = 0.52 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 4/50 (8%) Frame = -2 Query: 482 EEPGGQRAXIFDQGNRISQA----ISCADVADICVKALHDSTARNKSFDV 345 ++ GG R + + + + Q + ADVA++C++AL A+NK+FD+ Sbjct: 179 DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDL 228
>HISX_METJA (Q58851) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 429 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/65 (27%), Positives = 33/65 (50%) Frame = -2 Query: 440 NRISQAISCADVADICVKALHDSTARNKSFDVCYEYVSEQGNELYELVAHLPDKANNYLT 261 N+I + I A+ +I +KAL +S + C E+ ++ E E++ P++ N + Sbjct: 285 NKIFEEIEKAERKEIILKALENSAILIGDLEECIEFSNKYAPEHLEILTKNPEEVLNKIK 344 Query: 260 PALSV 246 A SV Sbjct: 345 HAGSV 349
>Y2766_ARATH (O80934) Protein At2g37660, chloroplast precursor| Length = 325 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 4/50 (8%) Frame = -2 Query: 482 EEPGGQRAXIFDQGNRI----SQAISCADVADICVKALHDSTARNKSFDV 345 ++ GG R + + + + ++ I+ ADVA++CV+AL A+ K+ D+ Sbjct: 251 DKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDL 300
>K2C8_PROAT (Q5K2N3) Keratin, type II cytoskeletal 8 (Cytokeratin-8) (CK-8)| (Keratin-8) (K8) Length = 496 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 283 SGK*ATSSYSSFPCSETYS*HTSKLLFLAVES 378 SG TSSYSSFP +YS ++ +ES Sbjct: 450 SGSFQTSSYSSFPLETSYSSPKKSIIVKTIES 481 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,199,525 Number of Sequences: 219361 Number of extensions: 1208967 Number of successful extensions: 2723 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2663 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2723 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)