ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550612.1| Oryza sativa (japonica cultivar-group), mRNA 88 3e-14
2gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 88 3e-14
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
4dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
5dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
6dbj|AK119542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
7dbj|AK105053.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
8dbj|AK067452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
9gb|BT016698.1| Zea mays clone Contig531 mRNA sequence 70 7e-09
10gb|AC006216.1|F5F19 Arabidopsis thaliana chromosome 1 BAC F5F19 ... 48 0.024
11emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chro... 44 0.38
12emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on ch... 42 1.5
13emb|AL831740.9| Mouse DNA sequence from clone RP23-395P16 on chr... 42 1.5
14emb|AL929571.10| Mouse DNA sequence from clone RP23-313G3 on chr... 42 1.5
15emb|AL645963.9| Mouse DNA sequence from clone RP23-76C16 on chro... 42 1.5
16gb|AC007441.9| Drosophila melanogaster clone BACR10E03, complete... 40 5.9
17ref|XM_518065.1| PREDICTED: Pan troglodytes similar to RIKEN cDN... 40 5.9
18gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 40 5.9
19gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence 40 5.9
20gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence 40 5.9
21ref|XM_535522.2| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
22ref|XM_844669.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
23ref|XM_854570.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
24ref|XM_854542.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
25ref|XM_861314.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
26ref|XM_861304.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
27ref|XM_861293.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
28ref|XM_861279.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
29ref|XM_861264.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
30ref|XM_847698.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
31ref|XM_847893.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
32ref|XM_845078.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
33ref|XM_855720.1| PREDICTED: Canis familiaris similar to ribosoma... 40 5.9
34gb|AC132612.3| Mus musculus BAC clone RP23-388L8 from chromosome... 40 5.9
35gb|AC122933.4| Mus musculus BAC clone RP23-18P3 from 14, complet... 40 5.9
36gb|AC132133.1| Mus musculus BAC clone RP23-242A12 from 17, compl... 40 5.9
37gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, co... 40 5.9
38ref|XM_784712.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
39emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 5.9
40gb|AC126122.2| Homo sapiens chromosome 3 clone RP11-751K5, compl... 40 5.9
41gb|AC099061.2| Homo sapiens chromosome 1 clone RP11-105D8, compl... 40 5.9
42gb|AC008694.6| Homo sapiens chromosome 5 clone CTB-6E24, complet... 40 5.9
43gb|AC109489.3| Homo sapiens chromosome 5 clone RP11-63G23, compl... 40 5.9
44ref|NM_142085.2| Drosophila melanogaster CG3199-RA (CG3199), mRNA 40 5.9
45ref|NM_141221.1| Drosophila melanogaster CG12584-RA (CG12584), mRNA 40 5.9
46gb|AY089379.1| Drosophila melanogaster AT20190 full insert cDNA 40 5.9
47gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, compl... 40 5.9
48gb|AC010621.7| Homo sapiens chromosome 5 clone CTD-2034J20, comp... 40 5.9
49gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map... 40 5.9
50gb|AF400075.1|AF400075 Homo sapiens coagulation factor II (throm... 40 5.9
51gb|AC090982.4| Homo sapiens chromosome 15, clone RP11-88O16, com... 40 5.9
52gb|AC092796.2| Homo sapiens chromosome 3 clone RP11-11F9, comple... 40 5.9
53gb|AC092040.2| Homo sapiens chromosome 3 clone RP11-129B22, comp... 40 5.9
54gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map... 40 5.9
55gb|AC007691.4|AC007691 Drosophila melanogaster, chromosome 3R, r... 40 5.9
56gb|AC007531.9|AC007531 Drosophila melanogaster, chromosome 3R, r... 40 5.9
57dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
58gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, r... 40 5.9
59gb|AC092569.2| Homo sapiens BAC clone CTD-2024L7 from 2, complet... 40 5.9
60dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
61gb|AC153997.3| Mus musculus 6 BAC RP24-571G22 (Roswell Park Canc... 40 5.9
62gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41... 40 5.9
63emb|AL161747.5|CNS01RHF Human chromosome 14 DNA sequence BAC R-6... 40 5.9
64gb|AE003606.4| Drosophila melanogaster chromosome 3R, section 2 ... 40 5.9
65emb|AL669891.12| Mouse DNA sequence from clone RP23-271F3 on chr... 40 5.9
66gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, compl... 40 5.9 
>ref|XM_550612.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Minus

                                                                        
Query: 237  aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
            |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 2212 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 2155

                                                                  
Query: 297  caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
            ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 2154 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 2105



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 159  aaaaccagtccccaatttgatcaggctca 187
            |||||||||||||||||  ||||||||||
Sbjct: 2278 aaaaccagtccccaattgaatcaggctca 2250
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Plus

                                                                          
Query: 237    aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
              |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 128322 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 128379

                                                                    
Query: 297    caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
              ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 128380 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 128429



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 159    aaaaccagtccccaatttgatcaggctca 187
              |||||||||||||||||  ||||||||||
Sbjct: 128256 aaaaccagtccccaattgaatcaggctca 128284
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Plus

                                                                           
Query: 237     aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
               |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 1808030 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 1808087

                                                                     
Query: 297     caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
               ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 1808088 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 1808137



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 159     aaaaccagtccccaatttgatcaggctca 187
               |||||||||||||||||  ||||||||||
Sbjct: 1807964 aaaaccagtccccaattgaatcaggctca 1807992
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>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0001H02
          Length = 147160

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Plus

                                                                        
Query: 237  aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
            |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 8508 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 8565

                                                                  
Query: 297  caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
            ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 8566 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 8615



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 159  aaaaccagtccccaatttgatcaggctca 187
            |||||||||||||||||  ||||||||||
Sbjct: 8442 aaaaccagtccccaattgaatcaggctca 8470
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0679C08
          Length = 156266

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Plus

                                                                          
Query: 237    aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
              |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 133179 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 133236

                                                                    
Query: 297    caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
              ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 133237 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 133286



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 159    aaaaccagtccccaatttgatcaggctca 187
              |||||||||||||||||  ||||||||||
Sbjct: 133113 aaaaccagtccccaattgaatcaggctca 133141
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>dbj|AK119542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D07, full
            insert sequence
          Length = 1104

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Minus

                                                                        
Query: 237  aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
            |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 1055 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 998

                                                                  
Query: 297  caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
            ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 997  caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 948
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>dbj|AK105053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E06, full
            insert sequence
          Length = 2001

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Minus

                                                                        
Query: 237  aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
            |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 1890 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 1833

                                                                  
Query: 297  caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
            ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 1832 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 1783



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 159  aaaaccagtccccaatttgatcaggctca 187
            |||||||||||||||||  ||||||||||
Sbjct: 1956 aaaaccagtccccaattgaatcaggctca 1928
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>dbj|AK067452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D17, full
            insert sequence
          Length = 2280

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 100/114 (87%), Gaps = 6/114 (5%)
 Strand = Plus / Minus

                                                                        
Query: 237  aacgcaaatggaaaaggcattgtttattacaggcctagaaataccactcacgctccgacg 296
            |||| ||||||||||| || || |||||||||||||| |||||||||||||||||| | |
Sbjct: 2211 aacgtaaatggaaaag-cagtgcttattacaggccta-aaataccactcacgctccaatg 2154

                                                                  
Query: 297  caggcatcctcctctccctccgttattccaagctttctgggcacgagaccttca 350
            ||||||||  ||||||||| | |||||||||||||  ||||||| |||||||||
Sbjct: 2153 caggcatc--cctctcccttcattattccaagctt--tgggcacaagaccttca 2104



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 159  aaaaccagtccccaatttgatcaggctca 187
            |||||||||||||||||  ||||||||||
Sbjct: 2277 aaaaccagtccccaattgaatcaggctca 2249
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>gb|BT016698.1| Zea mays clone Contig531 mRNA sequence
          Length = 1691

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 45/47 (95%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                           
Query: 235  acaacgcaaatggaaaa-ggcattgtttattacaggcctagaaatac 280
            |||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 1427 acaacgtaaatggaaaaaggcattgtttattacaggcctagaaatac 1381
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>gb|AC006216.1|F5F19 Arabidopsis thaliana chromosome 1 BAC F5F19 sequence, complete sequence
          Length = 110893

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 102   agaaaggaaagaaaacatcgcaag 125
             ||||||||||||||||||||||||
Sbjct: 54939 agaaaggaaagaaaacatcgcaag 54962
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>emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chromosome 9 Contains the 3'
             end of a novel gene (FLJ11985, MGC11337) (KIAA0870), the
             ORM1 gene for orosomucoid 1 (AGP1, AGP-A), the ORM2 gene
             for orosomucoid 2 (AGP2, AGP-B) and the gene for AT-hook
             transcription factor AKNA, complete sequence
          Length = 125673

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 403   gctggtcttacaggctcttggctgcg 428
             |||||||||||||| |||||||||||
Sbjct: 39266 gctggtcttacaggttcttggctgcg 39241
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>emb|AL844849.13| Mouse DNA sequence from clone RP23-383L13 on chromosome 2, complete
             sequence
          Length = 155501

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    gggggaagaaaggaaagaaaa 116
             |||||||||||||||||||||
Sbjct: 63515 gggggaagaaaggaaagaaaa 63495
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>emb|AL831740.9| Mouse DNA sequence from clone RP23-395P16 on chromosome 4, complete
             sequence
          Length = 166965

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 100   gaagaaaggaaagaaaacatc 120
             |||||||||||||||||||||
Sbjct: 16717 gaagaaaggaaagaaaacatc 16737
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>emb|AL929571.10| Mouse DNA sequence from clone RP23-313G3 on chromosome 2, complete
            sequence
          Length = 88123

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 96   gggggaagaaaggaaagaaaa 116
            |||||||||||||||||||||
Sbjct: 6796 gggggaagaaaggaaagaaaa 6816
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>emb|AL645963.9| Mouse DNA sequence from clone RP23-76C16 on chromosome 11, complete
             sequence
          Length = 176154

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    ggaagaaaggaaagaaaacat 119
             |||||||||||||||||||||
Sbjct: 16271 ggaagaaaggaaagaaaacat 16251
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>gb|AC007441.9| Drosophila melanogaster clone BACR10E03, complete sequence
          Length = 195212

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ggggaagaaaggaaagaaaa 116
              ||||||||||||||||||||
Sbjct: 191759 ggggaagaaaggaaagaaaa 191778
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>ref|XM_518065.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 4921536K21
           (LOC462225), mRNA
          Length = 845

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 143 tgtagaacaataaacaaaaaccag 166
           |||||||||||||||| |||||||
Sbjct: 817 tgtagaacaataaacagaaaccag 840
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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gggaagaaaggaaagaaaac 117
              ||||||||||||||||||||
Sbjct: 121216 gggaagaaaggaaagaaaac 121235
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>gb|AC087833.3| Papio anubis clone RP41-78F4, complete sequence
          Length = 154295

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ggaagaaaggaaagaaaaca 118
              ||||||||||||||||||||
Sbjct: 131807 ggaagaaaggaaagaaaaca 131826
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>gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence
          Length = 154021

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     gggaagaaaggaaagaaaac 117
              ||||||||||||||||||||
Sbjct: 137195 gggaagaaaggaaagaaaac 137176
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>ref|XM_535522.2| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 1 (LOC478348), mRNA
          Length = 1433

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1188 gggaagaaaggaaagaaaac 1207
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>ref|XM_844669.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 2 (LOC478348), mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1156 gggaagaaaggaaagaaaac 1175
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>ref|XM_854570.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 4 (LOC478348), mRNA
          Length = 1385

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1140 gggaagaaaggaaagaaaac 1159
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>ref|XM_854542.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 3 (LOC478348), mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1093 gggaagaaaggaaagaaaac 1112
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>ref|XM_861314.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 6 (LOC609491), mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1093 gggaagaaaggaaagaaaac 1112
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>ref|XM_861304.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 5 (LOC609491), mRNA
          Length = 1384

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1150 gggaagaaaggaaagaaaac 1169
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>ref|XM_861293.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 4 (LOC609491), mRNA
          Length = 1409

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1175 gggaagaaaggaaagaaaac 1194
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>ref|XM_861279.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 3 (LOC609491), mRNA
          Length = 1220

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 986  gggaagaaaggaaagaaaac 1005
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>ref|XM_861264.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 2 (LOC609491), mRNA
          Length = 1402

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1168 gggaagaaaggaaagaaaac 1187
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>ref|XM_847698.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 1 (LOC609491), mRNA
          Length = 1448

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1209 gggaagaaaggaaagaaaac 1228
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>ref|XM_847893.1| PREDICTED: Canis familiaris similar to ribosomal protein L4
            (LOC610395), mRNA
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1103 gggaagaaaggaaagaaaac 1122
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>ref|XM_845078.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 2 (LOC608310), mRNA
          Length = 1386

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1140 gggaagaaaggaaagaaaac 1159
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>ref|XM_855720.1| PREDICTED: Canis familiaris similar to ribosomal protein L4,
            transcript variant 3 (LOC608310), mRNA
          Length = 1339

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   gggaagaaaggaaagaaaac 117
            ||||||||||||||||||||
Sbjct: 1093 gggaagaaaggaaagaaaac 1112
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>gb|AC132612.3| Mus musculus BAC clone RP23-388L8 from chromosome 17, complete sequence
          Length = 203810

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     gggggaagaaaggaaagaaa 115
              ||||||||||||||||||||
Sbjct: 195837 gggggaagaaaggaaagaaa 195818
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>gb|AC122933.4| Mus musculus BAC clone RP23-18P3 from 14, complete sequence
          Length = 224941

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    gggggaagaaaggaaagaaaacat 119
             ||||||||||||| ||||||||||
Sbjct: 91838 gggggaagaaagggaagaaaacat 91815
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>gb|AC132133.1| Mus musculus BAC clone RP23-242A12 from 17, complete sequence
          Length = 174152

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    gggggaagaaaggaaagaaa 115
             ||||||||||||||||||||
Sbjct: 77883 gggggaagaaaggaaagaaa 77864
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>gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, complete sequence
          Length = 143815

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ggggaagaaaggaaagaaaa 116
              ||||||||||||||||||||
Sbjct: 133777 ggggaagaaaggaaagaaaa 133796
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>ref|XM_784712.1| PREDICTED: Strongylocentrotus purpuratus similar to DEAD
           (Asp-Glu-Ala-Asp) box polypeptide 23 (LOC584867),
           partial mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 catcctcctctccctccgtt 320
           ||||||||||||||||||||
Sbjct: 585 catcctcctctccctccgtt 566
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 248     aaaaggcattgtttattacaggcc 271
               |||||||||||||||| |||||||
Sbjct: 1831511 aaaaggcattgtttataacaggcc 1831488
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>gb|AC126122.2| Homo sapiens chromosome 3 clone RP11-751K5, complete sequence
          Length = 3917

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  ttccaagctttctgggcacg 341
            ||||||||||||||||||||
Sbjct: 2973 ttccaagctttctgggcacg 2954
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>gb|AC099061.2| Homo sapiens chromosome 1 clone RP11-105D8, complete sequence
          Length = 140987

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   atgtagaacaataaacaaaa 161
             ||||||||||||||||||||
Sbjct: 58653 atgtagaacaataaacaaaa 58634
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>gb|AC008694.6| Homo sapiens chromosome 5 clone CTB-6E24, complete sequence
          Length = 136843

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 143    tgtagaacaataaacaaaaaccag 166
              |||||||||||||||| |||||||
Sbjct: 125219 tgtagaacaataaacagaaaccag 125242
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>gb|AC109489.3| Homo sapiens chromosome 5 clone RP11-63G23, complete sequence
          Length = 148131

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gggggaagaaaggaaagaaa 115
             ||||||||||||||||||||
Sbjct: 65701 gggggaagaaaggaaagaaa 65720
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>ref|NM_142085.2| Drosophila melanogaster CG3199-RA (CG3199), mRNA
          Length = 850

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  ggggaagaaaggaaagaaaa 116
           ||||||||||||||||||||
Sbjct: 150 ggggaagaaaggaaagaaaa 169
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>ref|NM_141221.1| Drosophila melanogaster CG12584-RA (CG12584), mRNA
          Length = 2472

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  aaaccagtccccaatttgat 179
            ||||||||||||||||||||
Sbjct: 2165 aaaccagtccccaatttgat 2184
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>gb|AY089379.1| Drosophila melanogaster AT20190 full insert cDNA
          Length = 882

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  ggggaagaaaggaaagaaaa 116
           ||||||||||||||||||||
Sbjct: 144 ggggaagaaaggaaagaaaa 163
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>gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, complete sequence
          Length = 192063

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 ttccaagctttctgggcacg 341
           ||||||||||||||||||||
Sbjct: 830 ttccaagctttctgggcacg 811
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>gb|AC010621.7| Homo sapiens chromosome 5 clone CTD-2034J20, complete sequence
          Length = 52368

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 255   attgtttattacaggcctagaaat 278
             |||||||||||||| |||||||||
Sbjct: 36359 attgtttattacagccctagaaat 36382
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>gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map 15q21.3, complete
             sequence
          Length = 256019

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    ggaagaaaggaaagaaaaca 118
             ||||||||||||||||||||
Sbjct: 93716 ggaagaaaggaaagaaaaca 93735
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>gb|AF400075.1|AF400075 Homo sapiens coagulation factor II (thrombin) receptor-like 1 (F2RL1)
            gene, complete cds
          Length = 18351

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 255  attgtttattacaggcctagaaat 278
            |||||||||||||| |||||||||
Sbjct: 8934 attgtttattacagccctagaaat 8957
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>gb|AC090982.4| Homo sapiens chromosome 15, clone RP11-88O16, complete sequence
          Length = 195549

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   atgtagaacaataaacaaaa 161
             ||||||||||||||||||||
Sbjct: 62165 atgtagaacaataaacaaaa 62146
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>gb|AC092796.2| Homo sapiens chromosome 3 clone RP11-11F9, complete sequence
          Length = 151219

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ggggaagaaaggaaagaaaa 116
             ||||||||||||||||||||
Sbjct: 55708 ggggaagaaaggaaagaaaa 55727
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>gb|AC092040.2| Homo sapiens chromosome 3 clone RP11-129B22, complete sequence
          Length = 171177

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aagaaaggaaagaaaacatc 120
              ||||||||||||||||||||
Sbjct: 119329 aagaaaggaaagaaaacatc 119310
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>gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map 15q21, complete
             sequence
          Length = 131891

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    ggaagaaaggaaagaaaaca 118
             ||||||||||||||||||||
Sbjct: 93499 ggaagaaaggaaagaaaaca 93480
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>gb|AC007691.4|AC007691 Drosophila melanogaster, chromosome 3R, region 82B-82C, BAC clone
            BACR07E06, complete sequence
          Length = 171629

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  aaaccagtccccaatttgat 179
            ||||||||||||||||||||
Sbjct: 5907 aaaccagtccccaatttgat 5888
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>gb|AC007531.9|AC007531 Drosophila melanogaster, chromosome 3R, region 82B-82B, BAC clone
              BACR15E02, complete sequence
          Length = 169511

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    aaaccagtccccaatttgat 179
              ||||||||||||||||||||
Sbjct: 119319 aaaccagtccccaatttgat 119300
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      ggggaagaaaggaaagaaaa 116
               ||||||||||||||||||||
Sbjct: 7782439 ggggaagaaaggaaagaaaa 7782458
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>gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, region 88B-88B, BAC clone
             BACR01H04, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ggggaagaaaggaaagaaaa 116
             ||||||||||||||||||||
Sbjct: 43042 ggggaagaaaggaaagaaaa 43061
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>gb|AC092569.2| Homo sapiens BAC clone CTD-2024L7 from 2, complete sequence
          Length = 139880

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    gggggaagaaaggaaagaaa 115
             ||||||||||||||||||||
Sbjct: 71291 gggggaagaaaggaaagaaa 71272
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>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0064I23
          Length = 161865

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    ggggaagaaaggaaagaaaa 116
             ||||||||||||||||||||
Sbjct: 29642 ggggaagaaaggaaagaaaa 29661
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>gb|AC153997.3| Mus musculus 6 BAC RP24-571G22 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 150676

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ggaagaaaggaaagaaaaca 118
              ||||||||||||||||||||
Sbjct: 116607 ggaagaaaggaaagaaaaca 116626
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>gb|AE003703.3| Drosophila melanogaster chromosome 3R, section 41 of 118 of the complete
              sequence
          Length = 223948

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ggggaagaaaggaaagaaaa 116
              ||||||||||||||||||||
Sbjct: 126663 ggggaagaaaggaaagaaaa 126682
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>emb|AL161747.5|CNS01RHF Human chromosome 14 DNA sequence BAC R-689J19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170588

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   tcctcctctccctccgttat 322
             ||||||||||||||||||||
Sbjct: 25608 tcctcctctccctccgttat 25589
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>gb|AE003606.4| Drosophila melanogaster chromosome 3R, section 2 of 118 of the complete
              sequence
          Length = 299749

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    aaaccagtccccaatttgat 179
              ||||||||||||||||||||
Sbjct: 233782 aaaccagtccccaatttgat 233763
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>emb|AL669891.12| Mouse DNA sequence from clone RP23-271F3 on chromosome X, complete
              sequence
          Length = 221898

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ggggaagaaaggaaagaaaa 116
              ||||||||||||||||||||
Sbjct: 219521 ggggaagaaaggaaagaaaa 219540
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>gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, complete sequence
          Length = 107278

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   attgtttattacaggcctagaaat 278
             |||||||||||||| |||||||||
Sbjct: 94759 attgtttattacagccctagaaat 94736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,384,839
Number of Sequences: 3902068
Number of extensions: 4384839
Number of successful extensions: 114169
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113953
Number of HSP's gapped (non-prelim): 200
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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