>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 351     ctcttcctcgagcagcgcagctagctcgaac 381
               |||||||||||||||||||||  ||||||||
Sbjct: 1581621 ctcttcctcgagcagcgcagcgcgctcgaac 1581651

>emb|CR388084.7| Zebrafish DNA sequence from clone CH211-234D12 in linkage group 3,
             complete sequence
          Length = 64344

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 132   atctgaaggcaatccacatatagtt 156
             ||||||||||||| |||||||||||
Sbjct: 22407 atctgaaggcaatacacatatagtt 22431

>gb|AC121271.8| Mus musculus chromosome 7, clone RP24-554K14, complete sequence
          Length = 179901

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ccacacaacaaaatatgaaa 43
             ||||||||||||||||||||
Sbjct: 72793 ccacacaacaaaatatgaaa 72774

>gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, complete sequence
          Length = 197426

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    tcccgaacctttgcatgcca 270
              ||||||||||||||||||||
Sbjct: 164057 tcccgaacctttgcatgcca 164038

>ref|XM_001052791.1| PREDICTED: Mus musculus pseudouridylate synthase 7 homolog (S.
            cerevisiae), transcript variant 1 (Pus7), mRNA
          Length = 3481

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1447 tcccgaacctttgcatgcca 1428

>ref|XM_980945.1| PREDICTED: Mus musculus pseudouridylate synthase 7 homolog (S.
            cerevisiae), transcript variant 4 (Pus7), mRNA
          Length = 3509

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1469 tcccgaacctttgcatgcca 1450

>emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macrophage colony-stimulating
             factor and IL3 gene for interleukin-3, BAC bCHORI92M14
             clone, contig 1
          Length = 54760

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   cctttctctaggagagcaaa 130
             ||||||||||||||||||||
Sbjct: 48395 cctttctctaggagagcaaa 48414

>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence
          Length = 146364

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ccacacaacaaaatatgaaa 43
              ||||||||||||||||||||
Sbjct: 108191 ccacacaacaaaatatgaaa 108172

>gb|AC108078.3| Homo sapiens BAC clone RP11-790I12 from 4, complete sequence
          Length = 103343

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    tccacacaacaaaatatgaa 42
             ||||||||||||||||||||
Sbjct: 21216 tccacacaacaaaatatgaa 21197

>dbj|AK145380.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched
            library, clone:I0C0030E02 product:Hypothetical
            pseudouridine synthase KIAA1897 (EC 4.2.1.70) homolog
            [Homo sapiens], full insert sequence
          Length = 3749

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1724 tcccgaacctttgcatgcca 1705

>ref|NM_178403.3| Mus musculus pseudouridylate synthase 7 homolog (S. cerevisiae)
            (Pus7), mRNA
          Length = 3311

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1325 tcccgaacctttgcatgcca 1306

>dbj|AK142271.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330025L17 product:Hypothetical
            pseudouridine synthase KIAA1897 (EC 4.2.1.70) homolog
            [Homo sapiens], full insert sequence
          Length = 2923

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1342 tcccgaacctttgcatgcca 1323

>gb|AC022034.7| Homo sapiens chromosome 8, clone RP11-400K9, complete sequence
          Length = 195768

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   ctttctctaggagagcaaac 131
             ||||||||||||||||||||
Sbjct: 43354 ctttctctaggagagcaaac 43373

>dbj|AK160849.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched
            library, clone:3526405B07 product:Hypothetical
            pseudouridine synthase KIAA1897 (EC 4.2.1.70) homolog
            [Homo sapiens], full insert sequence
          Length = 3311

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1325 tcccgaacctttgcatgcca 1306

>gb|BC008544.1| Mus musculus pseudouridylate synthase 7 homolog (S. cerevisiae), mRNA
            (cDNA clone IMAGE:3497634), complete cds
          Length = 3137

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1327 tcccgaacctttgcatgcca 1308

>gb|BC010600.1| Mus musculus pseudouridylate synthase 7 homolog (S. cerevisiae),
           mRNA (cDNA clone IMAGE:4013154), containing frame-shift
           errors
          Length = 1906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 tcccgaacctttgcatgcca 270
           ||||||||||||||||||||
Sbjct: 104 tcccgaacctttgcatgcca 85

>gb|AC011084.17| Homo sapiens chromosome 11, clone RP11-21L19, complete sequence
          Length = 183854

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     ccacacaacaaaatatgaaa 43
              ||||||||||||||||||||
Sbjct: 115964 ccacacaacaaaatatgaaa 115983

>gb|AF135417.1|AF135417 Homo sapiens UDP glycosyltransferase 2 family protein gene, partial
            cds
          Length = 6734

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   tccacacaacaaaatatgaa 42
            ||||||||||||||||||||
Sbjct: 1421 tccacacaacaaaatatgaa 1402

>dbj|AK173290.1| Mus musculus mRNA for mKIAA1897 protein
          Length = 3091

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  tcccgaacctttgcatgcca 270
            ||||||||||||||||||||
Sbjct: 1313 tcccgaacctttgcatgcca 1294

>gb|AC116686.15| Mus musculus chromosome 7, clone RP23-457H7, complete sequence
          Length = 223846

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ccacacaacaaaatatgaaa 43
              ||||||||||||||||||||
Sbjct: 223789 ccacacaacaaaatatgaaa 223770

>emb|BX908399.33| Zebrafish DNA sequence from clone DKEY-11K4 in linkage group 18,
             complete sequence
          Length = 106712

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tctcaacaaggaaaaacatc 64
             ||||||||||||||||||||
Sbjct: 80380 tctcaacaaggaaaaacatc 80399

>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence
          Length = 222809

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    tcccgaacctttgcatgcca 270
              ||||||||||||||||||||
Sbjct: 187953 tcccgaacctttgcatgcca 187972


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,746,882
Number of Sequences: 3902068
Number of extensions: 3746882
Number of successful extensions: 60098
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60058
Number of HSP's gapped (non-prelim): 40
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)