ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62h02 |
|---|---|
| Clone Library Name | barley_pub |
>FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 350 Score = 194 bits (494), Expect = 1e-49 Identities = 84/139 (60%), Positives = 116/139 (83%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LLL+G L +Y +++N+L+EMG YFQ+QDDYLDC+GDP+ IGK+GTDIEDYKCSWL+VQA Sbjct: 212 LLLSGENLDNYGDVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQA 271 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +E A+E++ +IL+ENYGK P CV VKN+YKELDL+ +F EYE+ YK L++ I+A+P Sbjct: 272 LERADESQKRILFENYGKKDPACVAKVKNLYKELDLEAVFQEYENESYKKLIADIEAQPS 331 Query: 192 RAIREILKIFLKKIYRRKK 136 A++++LK FL KIY+R+K Sbjct: 332 IAVQKVLKSFLHKIYKRQK 350
>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 183 bits (465), Expect = 2e-46 Identities = 82/139 (58%), Positives = 110/139 (79%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L +VE+KNVL+EMG YFQ+QDDYLDCFG P+VIGK+GTDIED+KCSWL+V+A Sbjct: 204 LLMFGEDLEKHVEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKA 263 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +ELANE + K+L+ENYGK P V VK +Y L+LQ +F +YE+ YK L+++I+ P Sbjct: 264 LELANEEQKKVLHENYGKKDPSPVAKVKELYNTLNLQGVFEDYENTSYKKLITSIEGHPS 323 Query: 192 RAIREILKIFLKKIYRRKK 136 +A++ +LK FL KIYRR+K Sbjct: 324 KAVQAVLKSFLGKIYRRQK 342
>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 182 bits (461), Expect = 7e-46 Identities = 78/139 (56%), Positives = 113/139 (81%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L +++++KN+L++MG YFQ+QDDYLDCFG P+ IGK+GTDIED+KCSWL+V+A Sbjct: 204 LLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKA 263 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +EL+N+ + K+LY+NYGK P V VK +Y EL+LQ +F EYES+ Y+ LV++I+A P Sbjct: 264 LELSNDEQKKVLYDNYGKPDPANVAKVKALYDELNLQGVFTEYESKSYEKLVTSIEAHPS 323 Query: 192 RAIREILKIFLKKIYRRKK 136 +A++ +LK FL KIY+R+K Sbjct: 324 KAVQALLKSFLGKIYKRQK 342
>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial| precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 384 Score = 182 bits (461), Expect = 7e-46 Identities = 78/139 (56%), Positives = 110/139 (79%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L +++++KNVL++MG+YFQ+QDDYLDCF DP+ +GK+GTDIED+KCSWL+V+A Sbjct: 246 LLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKA 305 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +E +E + KILYENYGK P V VK++YKELDL+ +F+EYES+ Y+ L I+ Sbjct: 306 LERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQS 365 Query: 192 RAIREILKIFLKKIYRRKK 136 +AI+ +LK FL KIY+R+K Sbjct: 366 KAIQAVLKSFLAKIYKRQK 384
>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 179 bits (455), Expect = 4e-45 Identities = 80/139 (57%), Positives = 109/139 (78%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L + E+KNVL+EMG YFQ+QDDYLDCFG P+VIGK+GTDIED+KCSWL+V+A Sbjct: 204 LLMFGEDLEKHEEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKA 263 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +EL+NE + KIL+ENYGK P V VK +Y L+LQ +F +YE+ YK L+++I+ P Sbjct: 264 LELSNEEQKKILHENYGKKDPSSVAKVKELYHTLNLQGVFEDYENTSYKKLITSIEGHPS 323 Query: 192 RAIREILKIFLKKIYRRKK 136 +A++ +LK FL KIY+R+K Sbjct: 324 KAVQAVLKSFLGKIYKRQK 342
>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 343 Score = 179 bits (453), Expect = 6e-45 Identities = 81/139 (58%), Positives = 108/139 (77%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L +VE+KNVL+EMG YFQ+QDDYLDCFG P+VIGK+GTDIED+KCSWL+V+A Sbjct: 205 LLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFKCSWLVVKA 264 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +EL NE + K L+ENYGK P V VK VY L+LQ +F +YE+ YK L+++I+ P Sbjct: 265 LELPNEEQKKTLHENYGKKDPASVAKVKEVYHTLNLQAVFEDYEATSYKKLITSIENHPS 324 Query: 192 RAIREILKIFLKKIYRRKK 136 +A++ +LK FL KIY+R+K Sbjct: 325 KAVQAVLKSFLGKIYKRQK 343
>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 176 bits (446), Expect = 4e-44 Identities = 76/139 (54%), Positives = 108/139 (77%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L ++ ++KN+L+EMG YFQ+QDDYLDCFG P+ IGK+GTDIED+KCSWL+V+A Sbjct: 204 LLMVGENLDNHTDVKNILVEMGTYFQVQDDYLDCFGAPETIGKIGTDIEDFKCSWLVVKA 263 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +EL+NE + K+LYENYGK P V VK +Y EL+L+ + +YES+ Y+ LV+ I+ P Sbjct: 264 LELSNEEQKKVLYENYGKPDPANVAKVKTLYNELNLEGAYADYESKSYEKLVTCIEGHPS 323 Query: 192 RAIREILKIFLKKIYRRKK 136 +A++ +LK F KIY+R+K Sbjct: 324 KAVQGVLKSFWAKIYKRQK 342
>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 175 bits (444), Expect = 7e-44 Identities = 77/139 (55%), Positives = 106/139 (76%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L ++ ++K VL++MG+YFQ+QDDYLDCF DP+ +GK+GTDIED+KCSWL+V+A Sbjct: 204 LLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKA 263 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +E +E + KILYENYGK+ P V VK +YKELDL+ F+EYE Y+ L I+A Sbjct: 264 LERCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQS 323 Query: 192 RAIREILKIFLKKIYRRKK 136 +AI+ +LK FL KIY+R+K Sbjct: 324 KAIQAVLKSFLAKIYKRQK 342
>FPPS_HELAN (O64905) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 341 Score = 175 bits (443), Expect = 9e-44 Identities = 80/139 (57%), Positives = 109/139 (78%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA 373 LL+ G L ++VE+KNVL+EMG YFQ+QDDYLDCFG P+VIGK+GTDIED+ SWL+V+A Sbjct: 204 LLMFGEDLDNHVEVKNVLVEMGTYFQVQDDYLDCFGAPEVIGKIGTDIEDFS-SWLVVKA 262 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPD 193 +ELANE + K+L+ENYGK P V VK +Y L+LQ +F +YES YK L+++I+ P Sbjct: 263 LELANEEQKKVLHENYGKKDPSSVAKVKELYNTLNLQGVFEDYESTSYKKLITSIEGHPS 322 Query: 192 RAIREILKIFLKKIYRRKK 136 +A++ +LK FL KIY+R+K Sbjct: 323 KAVQAVLKSFLGKIYKRQK 341
>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 131 bits (330), Expect = 1e-30 Identities = 61/130 (46%), Positives = 86/130 (66%) Frame = -1 Query: 525 DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEM 346 ++ K +L+EMG +FQIQDDYLD FGDP V GK+GTDI+D KCSWL+VQ ++ A + Sbjct: 224 EHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQY 283 Query: 345 KILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILKI 166 +IL ENYG+ E V VK +Y+ELDL +FL+YE Y H+++ I+ + Sbjct: 284 QILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLG 343 Query: 165 FLKKIYRRKK 136 +KIY+R+K Sbjct: 344 LARKIYKRRK 353
>FPPS_CHICK (P08836) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 367 Score = 130 bits (327), Expect = 2e-30 Identities = 59/130 (45%), Positives = 86/130 (66%) Frame = -1 Query: 525 DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEM 346 ++ K +L+EMG YFQIQDDYLDCFGDP + GKVGTDI+D KCSWL+VQ ++ + Sbjct: 238 EHENAKAILLEMGEYFQIQDDYLDCFGDPALTGKVGTDIQDNKCSWLVVQCLQRVTPEQR 297 Query: 345 KILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILKI 166 ++L +NYG+ PE V VK +Y+ + ++ F +YE Y+ L I+ +R +EI Sbjct: 298 QLLEDNYGRKEPEKVAKVKELYEAVGMRAAFQQYEESSYRRLQELIEKHSNRLPKEIFLG 357 Query: 165 FLKKIYRRKK 136 +KIY+R+K Sbjct: 358 LAQKIYKRQK 367
>FPPS_RAT (P05369) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 127 bits (319), Expect = 2e-29 Identities = 63/130 (48%), Positives = 82/130 (63%) Frame = -1 Query: 525 DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEM 346 ++ +L+EMG +FQIQDDYLD FGDP V GKVGTDI+D KCSWL+VQ + A + Sbjct: 224 EHANALKILLEMGEFFQIQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRATPQQR 283 Query: 345 KILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILKI 166 +IL ENYG+ PE V VK +Y+ELDL+ +F +YE Y L S I+ I Sbjct: 284 QILEENYGQKDPEKVARVKALYEELDLRSVFFKYEEDSYNRLKSLIEQCSAPLPPSIFLE 343 Query: 165 FLKKIYRRKK 136 KIY+R+K Sbjct: 344 LANKIYKRRK 353
>FPPS_MOUSE (Q920E5) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 125 bits (313), Expect = 1e-28 Identities = 62/130 (47%), Positives = 81/130 (62%) Frame = -1 Query: 525 DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEM 346 ++ +L+EMG +FQ+QDDYLD FGDP V GKVGTDI+D KCSWL+VQ + A+ + Sbjct: 224 EHANALKILMEMGEFFQVQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRASPQQR 283 Query: 345 KILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILKI 166 +IL ENYG+ PE V VK +Y+ LDLQ F +YE Y L S I+ I Sbjct: 284 QILEENYGQKDPEKVARVKALYEALDLQSAFFKYEEDSYNRLKSLIEQCSAPLPPSIFME 343 Query: 165 FLKKIYRRKK 136 KIY+R+K Sbjct: 344 LANKIYKRRK 353
>FPPS_YEAST (P08524) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 352 Score = 123 bits (308), Expect = 4e-28 Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 2/132 (1%) Frame = -1 Query: 525 DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEM 346 D + ++VLI +G YFQIQDDYLDCFG P+ IGK+GTDI+D KCSW+I +A+ELA+ + Sbjct: 221 DLKQARDVLIPLGEYFQIQDDYLDCFGTPEQIGKIGTDIQDNKCSWVINKALELASAEQR 280 Query: 345 KILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTI-DAEPDRAIR-EIL 172 K L ENYGK K ++ +L ++ ++ EYE + K L + I + R + ++L Sbjct: 281 KTLDENYGKKDSVAEAKCKKIFNDLKIEQLYHEYEESIAKDLKAKISQVDESRGFKADVL 340 Query: 171 KIFLKKIYRRKK 136 FL K+Y+R K Sbjct: 341 TAFLNKVYKRSK 352
>FPPS_GIBFU (Q92235) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 122 bits (307), Expect = 5e-28 Identities = 64/140 (45%), Positives = 92/140 (65%), Gaps = 3/140 (2%) Frame = -1 Query: 546 LNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAME 367 LN A S+ + +++LI +G YFQIQDDYLD FG P+ IGK+GTDI+D KCSWL+ QA+ Sbjct: 209 LNLATPSNLKQAEDILIPLGEYFQIQDDYLDNFGKPEHIGKIGTDIKDNKCSWLVNQALA 268 Query: 366 LANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRV---YKHLVSTIDAEP 196 +A + KIL ENYG+ E VK +Y +L+L+ +L+YE +V + ++ ID E Sbjct: 269 VATPEQRKILEENYGRKDDEKEKVVKKLYDDLNLEQRYLDYEEKVVGQIRERIANID-EN 327 Query: 195 DRAIREILKIFLKKIYRRKK 136 D + + + FL KIY+R K Sbjct: 328 DGLKKTVFEAFLAKIYKRSK 347
>FPPS_KLULA (P49349) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 349 Score = 119 bits (299), Expect = 4e-27 Identities = 65/144 (45%), Positives = 93/144 (64%), Gaps = 5/144 (3%) Frame = -1 Query: 552 LLLNGAKLSDYVELK---NVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLI 382 L + A ++D +LK +VLI +G YFQIQDD+LDCFG P+ IGK+GTDI+D KCSW+I Sbjct: 206 LAMFAAGITDSKDLKQASDVLIPLGEYFQIQDDFLDCFGKPEDIGKIGTDIQDNKCSWVI 265 Query: 381 VQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTI-D 205 A++ A + + IL ENYG+ E + V+ EL++QDI+ +YE +L I + Sbjct: 266 NVALKNATKEQRDILDENYGRKDSEKEQKCRAVFNELNIQDIYHKYEEETASNLREKIAN 325 Query: 204 AEPDRAIR-EILKIFLKKIYRRKK 136 + R + E+L +FL KIY RKK Sbjct: 326 IDESRGFKAEVLTLFLNKIYHRKK 349
>FPPS_NEUCR (Q92250) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 110 bits (275), Expect = 3e-24 Identities = 55/140 (39%), Positives = 85/140 (60%), Gaps = 2/140 (1%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAM 370 +L+ A + + +++LI +G YFQ+QDDYLD FG P+ IGK+GTDI+D KCSWL+ +A+ Sbjct: 208 MLDIATPENLKQAEDILIPLGEYFQVQDDYLDNFGLPEHIGKIGTDIQDNKCSWLVNKAL 267 Query: 369 ELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDA--EP 196 + + K L ENYG+ +K +Y +L L+D + +YE + IDA E Sbjct: 268 SIVTPEQRKTLEENYGRKDKAKEAVIKQLYDDLKLEDHYKQYEEERVGEIRKMIDAIDES 327 Query: 195 DRAIREILKIFLKKIYRRKK 136 +++ + FL KIY+R K Sbjct: 328 KGLKKQVFEAFLGKIYKRSK 347
>FPPS_SCHPO (O14230) Probable farnesyl pyrophosphate synthetase (FPP| synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 106 bits (265), Expect = 4e-23 Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 2/127 (1%) Frame = -1 Query: 510 KNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYE 331 +++LI +G YFQ+QDDYLDC+GDP V GK+GTDI D KCSW+I A+ + IL + Sbjct: 221 QDILIILGKYFQVQDDYLDCYGDPTVTGKIGTDILDNKCSWIINLALAKCTPEQRVILDD 280 Query: 330 NYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDA--EPDRAIREILKIFLK 157 NYG+ E VK V++EL+++ F YE + ID E + I FL Sbjct: 281 NYGRKDSESEKRVKAVFEELNIRGEFENYEESEVSEIKKLIDGVDESTGLKKSIFTTFLG 340 Query: 156 KIYRRKK 136 KIY+R K Sbjct: 341 KIYKRNK 347
>IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 327 Score = 52.4 bits (124), Expect = 9e-07 Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Frame = -1 Query: 540 GAKLSDYVE-----LKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIV 379 GA ++D E LK +G+ FQIQDD LD GD + +GK VG+DI + K + +++ Sbjct: 188 GAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVI 247 Query: 378 QAMELANENEMKILYENYGKSS---PECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTI 208 A++ +E++ K L E G + E A++ + ++ ++ ++ K + Sbjct: 248 HALKTLDEDKKKRLLEILGNKNVKDEEIKEAIEILKPSIEYAKELMKQKTEEAKEYLKIF 307 Query: 207 DAEPDRAIREILKIFLKKIY 148 + + + + ++ + +IY Sbjct: 308 NKDRRKVLEDLADFIMSRIY 327
>IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 325 Score = 51.2 bits (121), Expect = 2e-06 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 373 ++ G + L++ +G+ FQI DDYLD D + +GK VG+DI + K + ++V+A Sbjct: 187 IMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKA 246 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVS 214 +E A+E + + L G + V + +IF Y + Y H V+ Sbjct: 247 LERASEKDRERLISILGSGDEKLVA---------EAIEIFERYGATEYAHAVA 290
>IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 324 Score = 50.8 bits (120), Expect = 2e-06 Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 5/137 (3%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 373 ++ GA + L++ +G+ FQI DDYLD D + +GK VG+DI + K + ++V+A Sbjct: 186 IMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKA 245 Query: 372 MELANENEMKILYENYGKSSPECVGAVKNVYKELD----LQDIFLEYESRVYKHLVSTID 205 +E A+E + + L G V +++ ++ L+Y + L D Sbjct: 246 LEEASEEDRERLISILGSGDEGSVAEAIEIFERYGATQYAHEVALDYVRMAKERLEILED 305 Query: 204 AEPDRAIREILKIFLKK 154 ++ A+ I L++ Sbjct: 306 SDARDALMRIADFVLER 322
>GGPS_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 330 Score = 47.0 bits (110), Expect = 4e-05 Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 5/143 (3%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 373 L+ GA +D + + +G+ FQI DD L D + +GK V +DI + K + L+++ Sbjct: 189 LIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGKKTILVIKT 248 Query: 372 MELANENEMKILYENYG--KSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAE 199 +EL E+E KI+ + G +S E + + ++ K+ L D + YK+ + +++ Sbjct: 249 LELCKEDEKKIVLKALGNKSASKEELMSSADIIKKYSL-DYAYNLAEKYYKNAIDSLNQV 307 Query: 198 PDRA--IREILKIFLKKIYRRKK 136 ++ + LK + RR+K Sbjct: 308 SSKSDIPGKALKYLAEFTIRRRK 330
>GGPS_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 332 Score = 43.1 bits (100), Expect = 5e-04 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 373 ++N A +L + +G+ FQI DD L GD + +GK + +DI + K + L+++ Sbjct: 191 IINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKT 250 Query: 372 MELANENEMKILYENYG 322 + A E+E KIL G Sbjct: 251 LSEATEDEKKILVSTLG 267
>ISPA_BACST (Q08291) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 297 Score = 36.2 bits (82), Expect = 0.063 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 373 L+ GA EL +G+ FQI+DD LD G + IGK VG+D + K ++ + + Sbjct: 197 LIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLS 256 Query: 372 MELANE 355 + A E Sbjct: 257 LAGAKE 262
>CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homolog (EC| 2.5.1.29) (GGPP synthetase) (Farnesyltranstransferase) Length = 300 Score = 35.4 bits (80), Expect = 0.11 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 9/81 (11%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSW----- 388 LL GAK D +G+ FQI DD LD + +GK +G D++ K ++ Sbjct: 200 LLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWG 259 Query: 387 ---LIVQAMELANENEMKILY 334 I QA L E + +ILY Sbjct: 260 VEESIKQAELLVEEAKEEILY 280
>RFL1_ARATH (Q8L3R3) Disease resistance protein RFL1 (RPS5-like protein 1)| (pNd13/pNd14) Length = 885 Score = 34.3 bits (77), Expect = 0.24 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 6/102 (5%) Frame = -1 Query: 552 LLLNGAKLSDYVELKNVLIEMG--VYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIV 379 LLL GAK D V + +++ EM ++ + C V +G D +W V Sbjct: 463 LLLEGAKDKDVVSMHDMVREMALWIFSDLGKHKERCI----VQAGIGLDELPEVENWRAV 518 Query: 378 QAMELANENEMKILYENYGKSSPECVGAV----KNVYKELDL 265 + M L N N KIL SPECV + +N YK +D+ Sbjct: 519 KRMSLMNNNFEKIL------GSPECVELITLFLQNNYKLVDI 554
>ISPA_MICLU (O66126) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 291 Score = 34.3 bits (77), Expect = 0.24 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = -1 Query: 492 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENY 325 +G+ FQI+DD LD G + IGK VG+D+ + K +++ + +E + + L E Y Sbjct: 210 VGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKLTETY 266
>ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 329 Score = 34.3 bits (77), Expect = 0.24 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Frame = -1 Query: 492 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENYGKS 316 +G FQ+ DD LD + Q +GK VG D+ + K + ++ AM N + ++ E + Sbjct: 209 LGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREAIEQG 268 Query: 315 SP-ECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREIL 172 E + V + E D + + V I+ P+ ++ L Sbjct: 269 GKREAIDEVLAIMTEHKSLDYAMNRAKEEAQKAVDAIEILPESEYKQAL 317
>ISPA_BACSU (P54383) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 272 Score = 33.9 bits (76), Expect = 0.31 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 373 +L A D L+ +G+ FQI+DD LD G + IGK VG+D + K ++ + + Sbjct: 196 ILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLS 255 Query: 372 ME 367 +E Sbjct: 256 LE 257
>ISPA_HAEIN (P45204) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 295 Score = 32.7 bits (73), Expect = 0.70 Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = -1 Query: 492 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIE 406 +G+ FQ+QDD LD GD IGK VG D++ Sbjct: 215 IGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
>ISPA_ECOLI (P22939) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 299 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -1 Query: 492 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKIL 337 +G+ FQ+QDD LD GD +GK G D + K ++ + +E A + ++ Sbjct: 215 IGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLI 267
>GGPPS_BOVIN (P56966) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPPSase) (Geranylgeranyl diphosphate synthase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5 Length = 294 Score = 30.8 bits (68), Expect = 2.7 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Frame = -1 Query: 528 SDYVE-LKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAM----- 370 SDY E LK +L +G++FQI+DDY + K D+ + K S+ + A+ Sbjct: 165 SDYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPE 224 Query: 369 ELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHL 220 +N ++ EN CV ++NV ++ E ES+ YK + Sbjct: 225 STQVQNILRQRTENI-DIKKYCVHYLENVGSFEYTRNTLKELESKAYKQI 273
>Y732_FUSNN (Q8RFG6) UPF0348 protein FN0732| Length = 396 Score = 30.8 bits (68), Expect = 2.7 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%) Frame = -1 Query: 468 DDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVG--- 298 DD D F I K+ D + K + L + L E KIL EN+G S C+ Sbjct: 186 DDEKDNFSSATYIRKILLDSNEKKENKLN-KIKNLVPEFSYKILEENFGVFS--CLSDFY 242 Query: 297 ------AVKNVYKELDLQDIFLEYESRVYKHLVSTIDAE 199 +KN + ++QD+ + E+R+YK+ + + E Sbjct: 243 DLIKYNIIKNCSELKNIQDLEIGLENRLYKYSLENLKFE 281
>CBIO7_METAC (Q8TK65) Putative cobalt import ATP-binding protein cbiO 7| Length = 453 Score = 30.4 bits (67), Expect = 3.5 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%) Frame = -1 Query: 465 DYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA-------MELANENEMKILYENYGKSSPE 307 DY+ + ++IG+ GT E +K L+ +A +E+ +E E + L YGK+SP+ Sbjct: 207 DYVYLMSNSKLIGQ-GTPAEVFKEQELLKKAGLRQPTTLEIYHEIERRGLA--YGKNSPK 263 Query: 306 CVGAVKNVYKELDL 265 + + N K LDL Sbjct: 264 TIPELVNTLKPLDL 277
>CDC3_YEAST (P32457) Cell division control protein 3| Length = 520 Score = 30.4 bits (67), Expect = 3.5 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -1 Query: 387 LIVQAMELANENEMKILYENYGKSSPECVGAVK--NVYKELD 268 LI Q ME E KILYENY S +G + +V+KE D Sbjct: 384 LIKQFMEELKERTSKILYENYRSSKLAKLGIKQDNSVFKEFD 425
>R1AB_CVPPU (Q9IW06) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown protein 1; 3C-like Length = 6684 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 474 IQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYE 331 I+ D+ D FGD +I G E+Y C+W V+ + N+ + + E Sbjct: 127 IEGDFKDYFGDEDIIEFEG---EEYHCAWTTVRDEKPLNQQTLFTIQE 171
>LOLD_LEPIN (Q8F6L8) Lipoprotein-releasing system ATP-binding protein lolD| Length = 241 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 195 DRAIREILKIFLKKIYRRKK*TILSCFHNYDYYGETLNTVHSTDGDVM 52 D +++ L+K+ R K TIL H+ D+ +T +H DG V+ Sbjct: 178 DSTNTKVVMNILEKVNRETKTTILVVTHDPDFASKTKRQIHLVDGRVV 225
>LOLD_LEPIC (Q72PP0) Lipoprotein-releasing system ATP-binding protein lolD| Length = 241 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 195 DRAIREILKIFLKKIYRRKK*TILSCFHNYDYYGETLNTVHSTDGDVM 52 D +++ L+K+ R K TIL H+ D+ +T +H DG V+ Sbjct: 178 DSTNTKVVMNILEKVNRETKTTILVVTHDPDFASKTKRQIHLVDGRVV 225
>YL140_MIMIV (Q5UR13) Hypothetical protein L140| Length = 304 Score = 30.0 bits (66), Expect = 4.5 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Frame = -1 Query: 525 DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGT-DIEDYKCS------WLIVQAM- 370 +++E LI F+ DYLD F + + VG DI +Y ++ Q++ Sbjct: 12 EFIEPTYYLISQAWNFKYFRDYLDSFANKLKLVYVGLIDINEYDYIDDPTHVYIFCQSIT 71 Query: 369 -ELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLE 247 EL + KIL S P+ +KN K L + D +E Sbjct: 72 KELLEKKFNKILLNTEQLSIPKYFDIIKNYLKHLTIIDYSIE 113
>GGPPS_HEVBR (Q94ID7) Geranylgeranyl pyrophosphate synthetase, chloroplast| precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 370 Score = 29.6 bits (65), Expect = 5.9 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = -1 Query: 549 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 373 +L G + +L+ ++G+ FQ+ DD LD Q +GK G D+ K ++ + Sbjct: 269 ILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLG 328 Query: 372 MELANENEMKI 340 +E + E K+ Sbjct: 329 IEKSREFAEKL 339
>TRA1_DROME (Q8I8U7) Transcription-associated protein 1 (dTRA1)| Length = 3805 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = -1 Query: 333 ENYGKSSPE-CVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILKIFLK 157 ++Y KS E C+ + YK +DL+D+ + V LV I P+ +RE + LK Sbjct: 1221 KSYMKSMLEICLTPINECYKNIDLKDLQAKATYEVIHELVRHI-TSPNTIVREESMVLLK 1279 Query: 156 KI 151 I Sbjct: 1280 HI 1281
>Y1664_METJA (Q59058) Hypothetical protein MJ1664| Length = 226 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = -1 Query: 348 MKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILK 169 MKIL N+G + + K Y L +DIF EY + L I+ E ++ +E+ Sbjct: 171 MKILNINFG-----VLASTKGFYGNLKKEDIFKEYNIYILDKL---IEKEKNKIFKELKD 222 Query: 168 IF 163 IF Sbjct: 223 IF 224
>RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1053 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = -1 Query: 381 VQAMELANENEMKILYENYGKSSPECVG--AVKNVYKELDLQDIFLEYESRVYKHLVSTI 208 ++ +L +E E ++ E YGK+ +G A+K + L DI LE E++ K + T Sbjct: 144 LEKKQLLSEKEYRVYREKYGKNFHAGMGAEAIKKI-----LSDIDLEKETQELKAELQT- 197 Query: 207 DAEPDRAIREILKIFLKKIYR 145 A+ R R I ++ + + +R Sbjct: 198 -AQGQRRTRAIRRLEVMEAFR 217
>YP01_MOUSE (Q8BQM4) Protein C030036P15Rik| Length = 679 Score = 29.3 bits (64), Expect = 7.8 Identities = 25/85 (29%), Positives = 34/85 (40%) Frame = -1 Query: 468 DDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVK 289 D D F D + K I+ L+ E +MKI E GK SP+ + + Sbjct: 604 DALFDVFADGEAAEKASVQIK------LLAALKEFQPVFKMKIRKEGRGKYSPDQLCVLD 657 Query: 288 NVYKELDLQDIFLEYESRVYKHLVS 214 NV L F+ Y+ V K L S Sbjct: 658 NVKMNLRR---FIAYQETVEKRLTS 679
>ISPB_SHIFL (P0AD58) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -1 Query: 492 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKIL 337 +G FQ+ DD LD D + +GK VG D+ + K + ++ AM + +++ Sbjct: 203 LGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMI 255
>ISPB_ECOLI (P0AD57) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -1 Query: 492 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKIL 337 +G FQ+ DD LD D + +GK VG D+ + K + ++ AM + +++ Sbjct: 203 LGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMI 255 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,434,781 Number of Sequences: 219361 Number of extensions: 1279651 Number of successful extensions: 3764 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3672 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3761 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
