Clone Name | rbah62h02 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009270.1| Triticum aestivum clone wlk8.pk0008.g5:fis, full insert mRNA sequence Length = 788 Score = 722 bits (364), Expect = 0.0 Identities = 498/537 (92%), Gaps = 8/537 (1%) Strand = Plus / Minus Query: 19 cagttcatatcatacatgttgtaaaagggagcgcat-gacatccccatccgtggaatgta 77 |||||||||||||||| |||||| |||||||| || |||||||||| ||||||||||| Sbjct: 723 cagttcatatcatacacgttgtacaagggagcttattgacatccccaaccgtggaatgtt 664 Query: 78 ctgtatttaaggtttctcca-tagtaatcatagttatgaaaacag--gaaaggatcgtct 134 ||| || |||| |||| ||||||||| ||| ||||||||| || ||| ||||| Sbjct: 663 ---tatata-ggttcctcccgtagtaatcacggttgtgaaaacagcagagaggggcgtct 608 Query: 135 acttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgcacgat 194 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 607 acttctttctcctataaatcttcttcaaaaagatcttcaaaatctcccgaatcgcacggt 548 Query: 195 ccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactccaaga 254 | || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 ctggctcggcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactccaaga 488 Query: 255 atatgtcctgaagatcaagctccttataaacattcttcactgctccgacacattctgggg 314 ||||||||||||||||||||||||| |||||||| ||||||||| | |||||||| ||| Sbjct: 487 atatgtcctgaagatcaagctccttgtaaacatttttcactgctgcaacacattccgggc 428 Query: 315 aagacttgccatagttctcgtatagtattttcatctcgttctcattagccagttccatag 374 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 427 aagacttgccatagttttcgtatagtattttcatctcattctcattagccagttccatag 368 Query: 375 cctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataa 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 cctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataa 308 Query: 435 cttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatct 494 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cttgagggtcgccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatct 248 Query: 495 caatcagtacatttttcagctcgacgtagtcgctcagcttcgcgccattcaagagca 551 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 247 caatcagtacatttttgagctcgacgtagtcgctcagtttcgcgccattcaagagca 191
>ref|XM_474182.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 406 bits (205), Expect = e-110 Identities = 364/417 (87%) Strand = Plus / Minus Query: 133 ctacttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgcacg 192 ||||||||| ||||| ||||||||||||| ||| ||| ||||| |||||||| ||||| Sbjct: 1224 ctacttcttcctcctgtaaatcttcttcagaaacgacttcaaaatatcccgaattgcacg 1165 Query: 193 atccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactccaa 252 || | || ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1164 gtcagtctcggcgtcgatggtcgaaaccaggtgcttgtaaactcttgactcgtactccaa 1105 Query: 253 gaatatgtcctgaagatcaagctccttataaacattcttcactgctccgacacattctgg 312 |||||||||||||||||||||||| | ||||| |||||||| || | || |||| ||| Sbjct: 1104 aaatatgtcctgaagatcaagctccctgtaaacgctcttcacttctgctacgcattttgg 1045 Query: 313 ggaagacttgccatagttctcgtatagtattttcatctcgttctcattagccagttccat 372 | |||||| || |||||||| ||||||||||||||||| |||||||| || |||||||| Sbjct: 1044 gtcagacttcccgtagttctcatatagtattttcatctcattctcattggcgagttccat 985 Query: 373 agcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaat 432 |||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 984 agcctgtactattagccaggaacacttgtagtcttcaatgtctgttccaaccttgccaat 925 Query: 433 aacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccat 492 |||| |||||||| |||||||||| |||||||||||||||||||||||| || ||||| Sbjct: 924 cacttctgggtcaccaaagcaatccaagtagtcatcctgtatctgaaagtatacgcccat 865 Query: 493 ctcaatcagtacatttttcagctcgacgtagtcgctcagcttcgcgccattcaagag 549 || || ||||||||||||||||| || ||||| |||| |||||||||||||||| Sbjct: 864 ttcgataagtacatttttcagctcaacatagtcactcaatctcgcgccattcaagag 808
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 132 tctacttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgcac 191 |||||||||| ||||| ||||||||||||| ||| ||| ||||| |||||||| |||| Sbjct: 33558894 tctacttcttcctcctgtaaatcttcttcagaaacgacttcaaaatatcccgaattgcac 33558953 Query: 192 gatccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactcca 251 | || | || ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 33558954 ggtcagtctcggcgtcgatggtcgaaaccaggtgcttgtaaactcttgactcgtactcca 33559013 Query: 252 agaatatgtcct 263 | |||||||||| Sbjct: 33559014 aaaatatgtcct 33559025 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 335 tatagtattttcatctcgttctcattagccagttccatagcctggacaattagccaggag 394 ||||||||||||||||| |||||||| || |||||||||||||| || ||||||||||| Sbjct: 33559406 tatagtattttcatctcattctcattggcgagttccatagcctgtactattagccaggaa 33559465 Query: 395 cacttgtagtcttctatgtctgttccaacct 425 |||||||||||||| |||||||||||||||| Sbjct: 33559466 cacttgtagtcttcaatgtctgttccaacct 33559496 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 468 cctgtatctgaaagtagactcccatctcaatcagtacatttttcagctcgacgtagtcgc 527 |||||||||||||||| || ||||| || || ||||||||||||||||| || ||||| | Sbjct: 33559692 cctgtatctgaaagtatacgcccatttcgataagtacatttttcagctcaacatagtcac 33559751 Query: 528 tcagcttcgcgccattcaagag 549 ||| |||||||||||||||| Sbjct: 33559752 tcaatctcgcgccattcaagag 33559773 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 422 accttgccaataacttgagggtcaccgaagcaatccaggtagtcatcctg 471 ||||||||||| |||| |||||||| |||||||||| |||||||||||| Sbjct: 33559572 accttgccaatcacttctgggtcaccaaagcaatccaagtagtcatcctg 33559621 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Plus Query: 261 cctgaagatcaagctccttataaacattcttcactgctccgacacattctggggaagact 320 ||||||||||||||||| | ||||| |||||||| || | || |||| |||| ||||| Sbjct: 33559214 cctgaagatcaagctccctgtaaacgctcttcacttctgctacgcattttgggtcagact 33559273 Query: 321 tgccatagttctc 333 | || |||||||| Sbjct: 33559274 tcccgtagttctc 33559286
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 132 tctacttctttctcctataaatcttcttcaaaaagatctttaaaatctcccgaatcgcac 191 |||||||||| ||||| ||||||||||||| ||| ||| ||||| |||||||| |||| Sbjct: 135183 tctacttcttcctcctgtaaatcttcttcagaaacgacttcaaaatatcccgaattgcac 135242 Query: 192 gatccggttcagcgtcgatggttgaaaccaggtgcttgtaaactcttgactcgtactcca 251 | || | || ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135243 ggtcagtctcggcgtcgatggtcgaaaccaggtgcttgtaaactcttgactcgtactcca 135302 Query: 252 agaatatgtcct 263 | |||||||||| Sbjct: 135303 aaaatatgtcct 135314 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 335 tatagtattttcatctcgttctcattagccagttccatagcctggacaattagccaggag 394 ||||||||||||||||| |||||||| || |||||||||||||| || ||||||||||| Sbjct: 135695 tatagtattttcatctcattctcattggcgagttccatagcctgtactattagccaggaa 135754 Query: 395 cacttgtagtcttctatgtctgttccaacct 425 |||||||||||||| |||||||||||||||| Sbjct: 135755 cacttgtagtcttcaatgtctgttccaacct 135785 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 468 cctgtatctgaaagtagactcccatctcaatcagtacatttttcagctcgacgtagtcgc 527 |||||||||||||||| || ||||| || || ||||||||||||||||| || ||||| | Sbjct: 135981 cctgtatctgaaagtatacgcccatttcgataagtacatttttcagctcaacatagtcac 136040 Query: 528 tcagcttcgcgccattcaagag 549 ||| |||||||||||||||| Sbjct: 136041 tcaatctcgcgccattcaagag 136062 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 422 accttgccaataacttgagggtcaccgaagcaatccaggtagtcatcctg 471 ||||||||||| |||| |||||||| |||||||||| |||||||||||| Sbjct: 135861 accttgccaatcacttctgggtcaccaaagcaatccaagtagtcatcctg 135910 Score = 42.1 bits (21), Expect = 1.9 Identities = 60/73 (82%) Strand = Plus / Plus Query: 261 cctgaagatcaagctccttataaacattcttcactgctccgacacattctggggaagact 320 ||||||||||||||||| | ||||| |||||||| || | || |||| |||| ||||| Sbjct: 135503 cctgaagatcaagctccctgtaaacgctcttcacttctgctacgcattttgggtcagact 135562 Query: 321 tgccatagttctc 333 | || |||||||| Sbjct: 135563 tcccgtagttctc 135575
>ref|XM_695422.1| PREDICTED: Danio rerio similar to Im:6904202 protein (LOC571794), mRNA Length = 1659 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 439 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 495 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 868 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 812
>ref|XM_682059.1| PREDICTED: Danio rerio similar to Im:6904202 protein (LOC558794), mRNA Length = 1659 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 439 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 495 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 868 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 812
>gb|BC083515.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone IMAGE:7049076), partial cds Length = 2029 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 439 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 495 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 774 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 718
>gb|BC097112.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase), mRNA (cDNA clone MGC:114048 IMAGE:7417512), complete cds Length = 1836 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 439 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 495 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 843 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 787
>ref|NM_001025471.1| Danio rerio farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (fdps), mRNA Length = 1836 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 439 agggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctc 495 ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 843 agggtcaccaaagcaatccaggtagtcatcctgtatctgaaagaactctcccatctc 787
>gb|L39789.1|MZEFPS Zea mays farnesyl pyrophosphate synthetase (fps) mRNA, complete cds Length = 1378 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 902 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 843 Query: 440 gggtcaccgaagcaatccaggtagtcatcctg 471 || |||||| | |||||||| ||||||||||| Sbjct: 842 ggatcaccgtaacaatccagatagtcatcctg 811
>gb|BT016427.1| Zea mays clone Contig260 mRNA sequence Length = 1469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 946 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 887 Query: 440 gggtcaccgaagcaatccaggtagtcatcctg 471 || ||||| | |||||||| ||||||||||| Sbjct: 886 ggatcaccataacaatccagatagtcatcctg 855
>gb|BT018228.1| Zea mays clone EL01N0561H08.c mRNA sequence Length = 1208 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 707 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 648 Query: 440 gggtcaccgaagcaatccaggtagtcatcctg 471 || ||||| | |||||||| ||||||||||| Sbjct: 647 ggatcaccataacaatccagatagtcatcctg 616
>gb|AF330037.1| Zea mays truncated geranylgeranyl-diphosphate synthase mRNA, partial cds Length = 1250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 779 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 720 Query: 440 gggtcaccgaagcaatccaggtagtcatcctg 471 || ||||| | |||||||| ||||||||||| Sbjct: 719 ggatcaccataacaatccagatagtcatcctg 688
>gb|AF330036.1| Zea mays geranylgeranyl-diphosphate synthase mRNA, complete cds Length = 1399 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 928 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 869 Query: 440 gggtcaccgaagcaatccaggtagtcatcctg 471 || ||||| | |||||||| ||||||||||| Sbjct: 868 ggatcaccataacaatccagatagtcatcctg 837
>gb|AY108110.1| Zea mays PCO074380 mRNA sequence Length = 1453 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||||||||| ||||| ||||| ||||||| |||||| |||| || | Sbjct: 928 acaactagccatgagcacttgtaatcttcaatgtccgttccaatcttgccgataaattca 869 Query: 440 gggtcaccgaagcaatccaggtagtcatcctg 471 || ||||| | |||||||| ||||||||||| Sbjct: 868 ggatcaccataacaatccagatagtcatcctg 837
>gb|AY110411.1| Zea mays CL242_1 mRNA sequence Length = 2504 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| ||||||||| || ||||||||||| ||||| ||||| | ||||||||| | || | Sbjct: 929 acaactagccaggaacatttgtagtcttcaatgtcagttccgatcttgccaatgaattca 870 Query: 440 gggtcaccgaagcaatccaggtagtcatcctg 471 || ||||| || ||||| || ||||||||||| Sbjct: 869 ggatcaccaaaacaatctagatagtcatcctg 838
>ref|NM_192229.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaaccttgccaataa 434 ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 803 gagcacttgtagtcttcaatgtccgttccaatcttgccaataa 761
>dbj|AK061657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D06, full insert sequence Length = 1332 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaaccttgccaataa 434 ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 887 gagcacttgtagtcttcaatgtccgttccaatcttgccaataa 845
>dbj|D85317.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl pyrophosphate synthase, complete cds Length = 1289 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaaccttgccaataa 434 ||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct: 844 gagcacttgtagtcttcaatgtccgttccaatcttgccaataa 802
>gb|BT009271.1| Triticum aestivum clone wlk8.pk0009.f9:fis, full insert mRNA sequence Length = 1301 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaata 433 |||||| |||||||||||||| ||||| ||||||| |||||||||| Sbjct: 858 ccaggaacacttgtagtcttcaatgtcagttccaatcttgccaata 813
>emb|BX005429.13| Zebrafish DNA sequence from clone DKEY-85K15 in linkage group 16, complete sequence Length = 173571 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 439 agggtcaccgaagcaatccaggtagtcatcctgt 472 ||||||||| |||||||||||||||||||||||| Sbjct: 95906 agggtcaccaaagcaatccaggtagtcatcctgt 95939
>gb|AY966012.1| Vitis vinifera farnesyl diphosphate synthase mRNA, complete cds Length = 1026 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 428 ccaataacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagact 487 ||||| ||||| ||||||||||| |||||||| || |||||||||| ||||| |||| | Sbjct: 731 ccaatcacttgggggtcaccgaaacaatccagataatcatcctgtacttgaaaatagatt 672 Query: 488 cccat 492 ||||| Sbjct: 671 cccat 667
>gb|AF390138.1|AF390138 X Citrofortunella microcarpa farnesyldiphosphate synthase (FPS1) mRNA, complete cds Length = 1392 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 395 cacttgtagtcttctatgtctgttccaaccttgccaataactt 437 |||||||| ||||| || || |||||||||||||||||||||| Sbjct: 866 cacttgtaatcttcaatatcagttccaaccttgccaataactt 824
>emb|X82543.1|PAFPS2 P.argentatum mRNA for farnesyl diphosphate synthase (FPS2) Length = 1233 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 355 ctcattagccagttccatagcctggacaattagccaggagcacttgtagtcttctatgtc 414 |||||| || ||||||| ||| | |||| |||||| |||||||| ||||||| ||||| Sbjct: 835 ctcattggcaagttccaaagctttcacaactagccacgagcacttaaagtcttcaatgtc 776 Query: 415 tgttccaaccttgccaat 432 |||||||| ||| ||||| Sbjct: 775 tgttccaatctttccaat 758
>gb|AF384040.1|AF384040 Mentha x piperita farnesyl diphosphate synthase mRNA, complete cds Length = 1427 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 443 tcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccat 492 |||||||||||||| | |||||||||||||| |||||||| | |||||| Sbjct: 838 tcaccgaagcaatctaagtagtcatcctgtacttgaaagtatattcccat 789
>gb|AF164026.1|AF164026 Xanthoceras sorbifolium farnesyl pyrophosphate synthase (FPS) mRNA, partial cds Length = 449 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcaccgaag 451 ||||||||| | ||||| || || ||||||||||| ||||| |||| || |||| || Sbjct: 190 gagcacttgaaatcttcaatatcagttccaaccttaccaatcacttcgggagcaccaaaa 131 Query: 452 caatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 497 |||||||| || |||||||||| ||||| |||| |||||| |||| Sbjct: 130 caatccagataatcatcctgtacttgaaaatagattcccatgtcaa 85
>emb|Y12072.1|CAFPS1 G.arboreum mRNA for farnesyl pyrophosphate synthase Length = 1286 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 449 aagcaatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 497 |||||||||| ||||||||||||| |||||||||| |||||| |||| Sbjct: 807 aagcaatccaaatagtcatcctgtacttgaaagtagattcccatgtcaa 759
>ref|XM_474180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 48.1 bits (24), Expect = 0.031 Identities = 87/108 (80%) Strand = Plus / Minus Query: 373 agcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaat 432 |||||| || |||| |||||| ||||| | ||||| ||||| ||||||| |||||| || Sbjct: 1020 agcctgtactattaaccaggaacacttatgatcttcgatgtcagttccaatcttgcctat 961 Query: 433 aacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaa 480 | ||||||| | || || |||| ||||||||||||||||||||| Sbjct: 960 ggtgttagggtcagcaaaacagtccaagtagtcatcctgtatctgaaa 913
>emb|X82542.1|PAFPS1 P.argentatum mRNA for farnesyl diphosphate synthase (FPS1) Length = 1283 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaataac 435 |||||| ||||| ||||||| ||||||||||||| ||| |||||||| Sbjct: 827 ccaggaacacttaaagtcttcaatgtctgttccaatctttccaataac 780
>gb|DQ059550.1| Panax notoginseng farnesyl pyrophosphate synthase mRNA, complete cds Length = 1409 Score = 48.1 bits (24), Expect = 0.031 Identities = 69/84 (82%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcacc 447 ||||||||||||| | ||||| || ||||| |||| ||| ||||| || | ||| |||| Sbjct: 906 ccaggagcacttgaaatcttcaatatctgtgccaatctttccaatcacctcaggtgcacc 847 Query: 448 gaagcaatccaggtagtcatcctg 471 ||||||||||| || |||||||| Sbjct: 846 aaagcaatccagataatcatcctg 823
>dbj|AK072747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023137P20, full insert sequence Length = 1367 Score = 48.1 bits (24), Expect = 0.031 Identities = 87/108 (80%) Strand = Plus / Minus Query: 373 agcctggacaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaat 432 |||||| || |||| |||||| ||||| | ||||| ||||| ||||||| |||||| || Sbjct: 1024 agcctgtactattaaccaggaacacttatgatcttcgatgtcagttccaatcttgcctat 965 Query: 433 aacttgagggtcaccgaagcaatccaggtagtcatcctgtatctgaaa 480 | ||||||| | || || |||| ||||||||||||||||||||| Sbjct: 964 ggtgttagggtcagcaaaacagtccaagtagtcatcctgtatctgaaa 917
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaa 422 ||||||||||||||||| ||||| ||||||| Sbjct: 29155033 gagcacttgtagtcttcaatgtccgttccaa 29155003
>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence Length = 137557 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 155 ttcttcaaaaagatctttaaaat 177 ||||||||||||||||||||||| Sbjct: 38573 ttcttcaaaaagatctttaaaat 38595
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaa 422 ||||||||||||||||| ||||| ||||||| Sbjct: 115399 gagcacttgtagtcttcaatgtccgttccaa 115369
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaa 422 ||||||||||||||||| ||||| ||||||| Sbjct: 820 gagcacttgtagtcttcaatgtccgttccaa 790
>dbj|AB021747.1| Oryza sativa (japonica cultivar-group) FPPS1 gene for farnesyl diphosphate synthase, complete cds Length = 7423 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaa 422 ||||||||||||||||| ||||| ||||||| Sbjct: 5337 gagcacttgtagtcttcaatgtccgttccaa 5307
>ref|NM_192180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| || |||||| | ||||| ||||| |||| | ||||||||||| || Sbjct: 809 acaaatagccaagaacacttgaaatcttcaatgtcacttcctatcttgccaataatttct 750 Query: 440 gggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 497 || ||||| || || ||||| || |||||||| | |||||||| || |||||||||| Sbjct: 749 ggttcaccaaaacagtccagataatcatcctggctttgaaagtaaacacccatctcaa 692
>emb|BX908753.8| Zebrafish DNA sequence from clone RP71-80I17 in linkage group 6, complete sequence Length = 93379 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 26 tatcatacatgttgtaaaaggg 47 |||||||||||||||||||||| Sbjct: 53013 tatcatacatgttgtaaaaggg 53034
>gb|AF112881.1|AF112881 Artemisia annua farnesyl diphosphate synthase mRNA, complete cds Length = 1333 Score = 44.1 bits (22), Expect = 0.48 Identities = 64/78 (82%) Strand = Plus / Minus Query: 355 ctcattagccagttccatagcctggacaattagccaggagcacttgtagtcttctatgtc 414 |||||| || ||||||| |||| ||||| || |||||||||||| ||||||| || || Sbjct: 883 ctcattggcgagttccaatgccttgacaactaaccaggagcacttaaagtcttcaatatc 824 Query: 415 tgttccaaccttgccaat 432 ||||||| ||| ||||| Sbjct: 823 agttccaatctttccaat 806
>dbj|AK099451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022H18, full insert sequence Length = 1079 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| || |||||| | ||||| ||||| |||| | ||||||||||| || Sbjct: 678 acaaatagccaagaacacttgaaatcttcaatgtcacttcctatcttgccaataatttct 619 Query: 440 gggtcaccgaagcaatccaggtagtcatcctgtatctgaaagtagactcccatctcaa 497 || ||||| || || ||||| || |||||||| | |||||||| || |||||||||| Sbjct: 618 ggttcaccaaaacagtccagataatcatcctggctttgaaagtaaacacccatctcaa 561
>gb|AF136602.1|AF136602 Artemisia annua farnesyl diphosphate synthase (fps2) mRNA, complete cds Length = 1333 Score = 44.1 bits (22), Expect = 0.48 Identities = 64/78 (82%) Strand = Plus / Minus Query: 355 ctcattagccagttccatagcctggacaattagccaggagcacttgtagtcttctatgtc 414 |||||| || ||||||| |||| ||||| || |||||||||||| ||||||| || || Sbjct: 883 ctcattggcgagttccaatgccttgacaactaaccaggagcacttaaagtcttcaatatc 824 Query: 415 tgttccaaccttgccaat 432 ||||||| ||| ||||| Sbjct: 823 agttccaatctttccaat 806
>emb|BX004845.5| Zebrafish DNA sequence from clone CH211-67O1, complete sequence Length = 165089 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 catatcatacatgttgtaaaag 45 |||||||||||||||||||||| Sbjct: 161995 catatcatacatgttgtaaaag 161974
>gb|AY461811.1| Taxus x media farnesyl diphosphate synthase mRNA, complete cds Length = 1464 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Minus Query: 428 ccaataacttgagggtcaccgaagcaatccaggtagtcatcctgta 473 |||||||||||||| ||||| |||||||| || || ||||| |||| Sbjct: 855 ccaataacttgaggatcaccaaagcaatcgagataatcatcttgta 810
>dbj|AB053487.1| Humulus lupulus fpps mRNA for farnesyl pyrophophate synthase, complete cds Length = 1029 Score = 44.1 bits (22), Expect = 0.48 Identities = 67/82 (81%) Strand = Plus / Minus Query: 392 gagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcaccgaag 451 ||||||||| ||||||| || ||||| |||| ||||||||| || | |||| || || Sbjct: 770 gagcacttgaagtcttcaatatctgtaccaatcttgccaattacatctgggtggccaaaa 711 Query: 452 caatccaggtagtcatcctgta 473 ||||||| ||||||||||||| Sbjct: 710 caatccaaatagtcatcctgta 689
>ref|XM_542241.2| PREDICTED: Canis familiaris similar to piwi-like 4 (LOC485123), mRNA Length = 3222 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 tcttcaaaaagatctttaaaa 176 ||||||||||||||||||||| Sbjct: 857 tcttcaaaaagatctttaaaa 877
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end Length = 225394 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 gtcgatggttgaaaccaggtg 225 ||||||||||||||||||||| Sbjct: 113903 gtcgatggttgaaaccaggtg 113883
>gb|AC121336.3| Homo sapiens 12 BAC RP11-134P3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171437 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aaggatcgtctacttctttct 144 ||||||||||||||||||||| Sbjct: 44176 aaggatcgtctacttctttct 44156
>emb|CR604759.1| full-length cDNA clone CS0DF013YK24 of Fetal brain of Homo sapiens (human) Length = 796 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 ctgtatttaaggtttctccat 98 ||||||||||||||||||||| Sbjct: 52 ctgtatttaaggtttctccat 72
>gb|AC007182.3|AC007182 Homo sapiens chromosome 14 clone BAC 507E23 map 14q24.3, complete sequence Length = 192389 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ctgtatttaaggtttctccat 98 ||||||||||||||||||||| Sbjct: 163861 ctgtatttaaggtttctccat 163841
>emb|AL844588.17| Mouse DNA sequence from clone RP23-244N6 on chromosome 2, complete sequence Length = 142422 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gctccttataaacattcttca 293 ||||||||||||||||||||| Sbjct: 105841 gctccttataaacattcttca 105821
>gb|AC152058.8| Mus musculus BAC clone RP24-327D15 from chromosome 10, complete sequence Length = 204754 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 148 ataaatcttcttcaaaaagatctttaaaa 176 ||||||||| ||||||||||| ||||||| Sbjct: 52159 ataaatctttttcaaaaagatttttaaaa 52187
>gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q24.2, complete sequence Length = 199668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 catatcatacatgttgtaaaa 44 ||||||||||||||||||||| Sbjct: 133757 catatcatacatgttgtaaaa 133777
>ref|NM_202836.1| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.2 mRNA, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccatagttctcgtatagtat 342 |||||||||||||||||||| Sbjct: 899 ccatagttctcgtatagtat 880 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 431 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 834 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 791
>ref|NM_117823.2| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.1 mRNA, complete cds Length = 1278 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccatagttctcgtatagtat 342 |||||||||||||||||||| Sbjct: 886 ccatagttctcgtatagtat 867 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 431 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 821 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 778
>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence Length = 218747 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 11759 tgtatttaaggtttctccat 11740
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccggttcagcgtcgatggtt 214 |||||||||||||||||||| Sbjct: 237073 ccggttcagcgtcgatggtt 237092
>ref|XM_659032.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6520.2), mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcctgaagatcaagctcctt 279 |||||||||||||||||||| Sbjct: 914 tcctgaagatcaagctcctt 895
>gb|BT014068.1| Lycopersicon esculentum clone 133168F, mRNA sequence Length = 1395 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cttcaaaaagatctttaaaa 176 |||||||||||||||||||| Sbjct: 574 cttcaaaaagatctttaaaa 555
>ref|XM_532456.2| PREDICTED: Canis familiaris similar to A-kinase anchor protein 9 isoform 2 (LOC475224), mRNA Length = 12421 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ttcttcaaaaagatctttaa 174 |||||||||||||||||||| Sbjct: 1815 ttcttcaaaaagatctttaa 1796
>ref|XM_445417.1| Candida glabrata CBS138, CAGL0C05577g partial mRNA Length = 1860 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ataaatcttcttcaaaaaga 167 |||||||||||||||||||| Sbjct: 1096 ataaatcttcttcaaaaaga 1115
>gb|AC104373.4| Homo sapiens chromosome 8, clone RP11-1144P22, complete sequence Length = 89086 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 caatcagtacatttttcagc 514 |||||||||||||||||||| Sbjct: 82125 caatcagtacatttttcagc 82106
>gb|AC123861.4| Mus musculus BAC clone RP23-351E20 from chromosome 2, complete sequence Length = 198454 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gtggaatgtactgtatttaa 87 |||||||||||||||||||| Sbjct: 129721 gtggaatgtactgtatttaa 129702
>ref|XM_757888.1| Theileria parva strain Muguga chromosome 3 farnesyl pyrophosphate synthetase (TP03_0857) partial mRNA Length = 1062 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agctccttataaacattctt 291 |||||||||||||||||||| Sbjct: 938 agctccttataaacattctt 919
>ref|XM_718878.1| Plasmodium yoelii yoelii str. 17XNL chloroquine resistance marker protein (PY03769) partial mRNA Length = 8367 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 tcttctatgtctgttccaac 423 |||||||||||||||||||| Sbjct: 35 tcttctatgtctgttccaac 16
>gb|AY123429.1|AY123426S04 Papio anubis anubis neurofibromatosis type 2 region, section 4; and merlin (NF2) gene, exons 2 through 16 and complete cds Length = 100801 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 caatcagtacatttttcagctcga 518 |||||||||||| ||||||||||| Sbjct: 2216 caatcagtacatctttcagctcga 2239
>gb|AC115802.10| Mus musculus, clone RP23-408J7, complete sequence Length = 185710 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 aatcttcttcaaaaagatctttaa 174 |||||||| ||||||||||||||| Sbjct: 40046 aatcttctacaaaaagatctttaa 40023
>emb|AL161798.23| Human DNA sequence from clone RP11-108M11 on chromosome 10 Contains the 3' end of a novel gene (FLJ37306), a novel gene and a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene, complete sequence Length = 134438 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 36063 tgtatttaaggtttctccat 36044
>emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on chromosome 13 Contains a novel pseudogene, complete sequence Length = 176797 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 98321 tgtatttaaggtttctccat 98340
>emb|AL135934.19| Human DNA sequence from clone RP5-945I17 on chromosome 11p12-13, complete sequence Length = 93708 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 45174 tgtatttaaggtttctccat 45155
>gb|AY149028.1| Plasmodium chabaudi chabaudi strain AS clone YAC101, complete sequence Length = 80019 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 caatcagtacatttttcagc 514 |||||||||||||||||||| Sbjct: 7867 caatcagtacatttttcagc 7886
>gb|AY117354.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1060 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccatagttctcgtatagtat 342 |||||||||||||||||||| Sbjct: 839 ccatagttctcgtatagtat 820 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 431 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 774 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 731
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 acgatccggttcagcgtcga 209 |||||||||||||||||||| Sbjct: 2262537 acgatccggttcagcgtcga 2262556
>gb|AY072207.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccatagttctcgtatagtat 342 |||||||||||||||||||| Sbjct: 885 ccatagttctcgtatagtat 866 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 431 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 820 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 777
>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence Length = 558804 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ataaatcttcttcaaaaaga 167 |||||||||||||||||||| Sbjct: 537514 ataaatcttcttcaaaaaga 537533
>gb|AC104012.11| Homo sapiens chromosome 8, clone RP11-281N10, complete sequence Length = 170668 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 caatcagtacatttttcagc 514 |||||||||||||||||||| Sbjct: 26635 caatcagtacatttttcagc 26616
>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence Length = 165662 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 tgaaagtagactcccatctc 495 |||||||||||||||||||| Sbjct: 104384 tgaaagtagactcccatctc 104403
>emb|X99624.2|ENLYSFGEN Emericella nidulans lysF gene for homoaconitase (exon 1-2) Length = 3444 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 tcctgaagatcaagctcctt 279 |||||||||||||||||||| Sbjct: 329 tcctgaagatcaagctcctt 310
>gb|AC025946.9| Homo sapiens chromosome 10 clone RP11-543F8, complete sequence Length = 197191 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 ttcttcaaaaagatctttaaaatc 178 ||||||||| |||||||||||||| Sbjct: 156738 ttcttcaaatagatctttaaaatc 156761
>gb|AC102945.2| Homo sapiens chromosome 8, clone CTD-2373N4, complete sequence Length = 127677 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 99116 tgtatttaaggtttctccat 99097
>gb|AC090467.6| Homo sapiens chromosome 11, clone RP11-634M17, complete sequence Length = 208525 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 35967 tgtatttaaggtttctccat 35986
>gb|DQ087959.1| Panax ginseng farnesyl diphosphate synthase (FPS) mRNA, complete cds Length = 1343 Score = 40.1 bits (20), Expect = 7.5 Identities = 68/84 (80%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttgagggtcacc 447 ||||||||||||| | ||||| || ||||| |||| ||| ||||| || | || |||| Sbjct: 883 ccaggagcacttgaaatcttcaatatctgtgccaatcttcccaatcacctctggtgcacc 824 Query: 448 gaagcaatccaggtagtcatcctg 471 ||||||||||| || |||||||| Sbjct: 823 aaagcaatccagataatcatcctg 800
>gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, complete sequence Length = 152533 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ttcaaaaagatctttaaaat 177 |||||||||||||||||||| Sbjct: 97808 ttcaaaaagatctttaaaat 97789
>gb|AC026720.6| Homo sapiens chromosome 5 clone CTD-2193G21, complete sequence Length = 151090 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 tataaatcttcttcaaaaagatct 170 ||||||||||||||||||| |||| Sbjct: 143227 tataaatcttcttcaaaaaaatct 143250
>gb|AC008693.9| Homo sapiens chromosome 5 clone CTB-69A13, complete sequence Length = 203568 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 tataaatcttcttcaaaaagatct 170 ||||||||||||||||||| |||| Sbjct: 116663 tataaatcttcttcaaaaaaatct 116686
>gb|AC008519.5| Homo sapiens chromosome 5 clone CTC-460G13, complete sequence Length = 195979 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ttcaaaaagatctttaaaat 177 |||||||||||||||||||| Sbjct: 191508 ttcaaaaagatctttaaaat 191527
>emb|BX323883.14| Zebrafish DNA sequence from clone CH211-285M21 in linkage group 1, complete sequence Length = 195250 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ttcaaaaagatctttaaaat 177 |||||||||||||||||||| Sbjct: 21240 ttcaaaaagatctttaaaat 21221
>emb|BX827727.1|CNS0A4KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1198 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccatagttctcgtatagtat 342 |||||||||||||||||||| Sbjct: 844 ccatagttctcgtatagtat 825 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 431 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 779 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 736
>emb|BX826432.1|CNS0A41B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 968 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccatagttctcgtatagtat 342 |||||||||||||||||||| Sbjct: 584 ccatagttctcgtatagtat 565 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 431 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 519 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 476
>gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complete sequence Length = 150942 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tttctccatagtaatcatag 109 |||||||||||||||||||| Sbjct: 8953 tttctccatagtaatcatag 8972
>gb|AC010881.8| Homo sapiens BAC clone RP11-289J14 from 2, complete sequence Length = 174927 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ggggaagacttgccatagtt 330 |||||||||||||||||||| Sbjct: 79538 ggggaagacttgccatagtt 79519
>gb|AC103959.18| Homo sapiens chromosome 8, clone GS1-211B7, complete sequence Length = 103584 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 32591 tgtatttaaggtttctccat 32572
>gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, complete sequence Length = 200292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 tgaaagtagactcccatctc 495 |||||||||||||||||||| Sbjct: 26127 tgaaagtagactcccatctc 26146
>dbj|AK100273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A14, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 7.5 Identities = 56/68 (82%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||| ||||| ||||| ||||| || || | ||||||||||| || Sbjct: 1026 acaactagccaagagcatttgtaatcttcaatgtcagtcccgatcttgccaataaatttg 967 Query: 440 gggtcacc 447 |||||||| Sbjct: 966 gggtcacc 959
>dbj|AK073822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I20, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 7.5 Identities = 56/68 (82%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||| ||||| ||||| ||||| || || | ||||||||||| || Sbjct: 1098 acaactagccaagagcatttgtaatcttcaatgtcagtcccgatcttgccaataaatttg 1039 Query: 440 gggtcacc 447 |||||||| Sbjct: 1038 gggtcacc 1031
>gb|AC114578.14| Mus musculus chromosome 19, clone RP23-162C4, complete sequence Length = 201229 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 tgtatttaaggtttctccat 98 |||||||||||||||||||| Sbjct: 18329 tgtatttaaggtttctccat 18348
>gb|AC140282.3| Mus musculus BAC clone RP24-501L1 from 1, complete sequence Length = 206690 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 caaaaagatctttaaaatct 179 |||||||||||||||||||| Sbjct: 198714 caaaaagatctttaaaatct 198695
>gb|AC101841.5| Mus musculus chromosome 1, clone RP23-251G19, complete sequence Length = 174900 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 caaaaagatctttaaaatct 179 |||||||||||||||||||| Sbjct: 98839 caaaaagatctttaaaatct 98820
>dbj|AP006403.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16P18, TM0289, complete sequence Length = 94172 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tttctcctataaatcttctt 159 |||||||||||||||||||| Sbjct: 12506 tttctcctataaatcttctt 12487
>gb|L46349.1|ATHFPS2R Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ccatagttctcgtatagtat 342 |||||||||||||||||||| Sbjct: 885 ccatagttctcgtatagtat 866 Score = 40.1 bits (20), Expect = 7.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 388 ccaggagcacttgtagtcttctatgtctgttccaaccttgccaa 431 ||||||||| ||| | |||||||||||||| || | |||||||| Sbjct: 820 ccaggagcatttgaaatcttctatgtctgtccctatcttgccaa 777
>emb|AL844896.7| Mouse DNA sequence from clone RP23-356L21 on chromosome 2, complete sequence Length = 83203 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 ataaatcttcttcaaaaagatctt 171 |||||||||||||||||| ||||| Sbjct: 48230 ataaatcttcttcaaaaaaatctt 48253
>emb|AL163613.2|CNS01RIJ Human chromosome 14 DNA sequence BAC R-25I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 150312 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ggaatgtactgtatttaagg 89 |||||||||||||||||||| Sbjct: 105639 ggaatgtactgtatttaagg 105658
>emb|AL359396.5|CNS05TEU Human chromosome 14 DNA sequence BAC R-314P15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163795 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tacttctttctcctataaatcttc 157 ||||||||||||||||| |||||| Sbjct: 131628 tacttctttctcctatatatcttc 131605
>emb|AL929046.9| Mouse DNA sequence from clone RP23-308N4 on chromosome 2, complete sequence Length = 181337 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gtggaatgtactgtatttaa 87 |||||||||||||||||||| Sbjct: 160591 gtggaatgtactgtatttaa 160610
>gb|AY162472.1| Eucommia ulmoides farnesyl pyrophosphate synthetase mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 7.5 Identities = 56/68 (82%) Strand = Plus / Minus Query: 404 tcttctatgtctgttccaaccttgccaataacttgagggtcaccgaagcaatccaggtag 463 ||||| || |||| ||||| ||| ||||| || | ||| ||||| || ||||||||||| Sbjct: 839 tcttcaatatctgatccaatctttccaatcacctcaggatcaccaaaacaatccaggtaa 780 Query: 464 tcatcctg 471 |||||||| Sbjct: 779 tcatcctg 772
>dbj|AB052680.1| Eucommia ulmoides EUFPS1 mRNA for putative FPP synthase 1, complete cds Length = 1264 Score = 40.1 bits (20), Expect = 7.5 Identities = 56/68 (82%) Strand = Plus / Minus Query: 404 tcttctatgtctgttccaaccttgccaataacttgagggtcaccgaagcaatccaggtag 463 ||||| || |||| ||||| ||| ||||| || | ||| ||||| || ||||||||||| Sbjct: 846 tcttcaatatctgatccaatctttccaatcacctcaggatcaccaaaacaatccaggtaa 787 Query: 464 tcatcctg 471 |||||||| Sbjct: 786 tcatcctg 779
>dbj|AB021979.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl diphosphate synthase, partial cds Length = 725 Score = 40.1 bits (20), Expect = 7.5 Identities = 56/68 (82%) Strand = Plus / Minus Query: 380 acaattagccaggagcacttgtagtcttctatgtctgttccaaccttgccaataacttga 439 |||| |||||| ||||| ||||| ||||| ||||| || || | ||||||||||| || Sbjct: 315 acaactagccaagagcatttgtaatcttcaatgtcagtcccgatcttgccaataaatttg 256 Query: 440 gggtcacc 447 |||||||| Sbjct: 255 gggtcacc 248
>dbj|AB041626.2| Eucommia ulmoides EUFPPS1 mRNA for putative FPP synthase 1, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 7.5 Identities = 56/68 (82%) Strand = Plus / Minus Query: 404 tcttctatgtctgttccaaccttgccaataacttgagggtcaccgaagcaatccaggtag 463 ||||| || |||| ||||| ||| ||||| || | ||| ||||| || ||||||||||| Sbjct: 850 tcttcaatatctgatccaatctttccaatcacctcaggatcaccaaaacaatccaggtaa 791 Query: 464 tcatcctg 471 |||||||| Sbjct: 790 tcatcctg 783 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,154,766 Number of Sequences: 3902068 Number of extensions: 5154766 Number of successful extensions: 94111 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 93874 Number of HSP's gapped (non-prelim): 237 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)