ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62g22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL590398.9| Human DNA sequence from clone RP11-446G24 on chr... 42 0.60
2dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 0.60
3gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 0.60
4gb|AF535436.1| HIV-1 isolate 88USMF880113sg from USA envelope gl... 40 2.4
5gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, compl... 40 2.4
6gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, comp... 40 2.4
7gb|AC122538.4| Mus musculus BAC clone RP24-548J11 from 16, compl... 40 2.4
8dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 2.4
9ref|NM_127823.1| Arabidopsis thaliana catalytic AT2G22570 transc... 38 9.4
10gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genom... 38 9.4
11gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 38 9.4
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 9.4
13emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 38 9.4
14gb|AC111008.6| Mus musculus BAC clone RP23-415J21 from chromosom... 38 9.4
15gb|AC123033.4| Mus musculus BAC clone RP24-482F14 from chromosom... 38 9.4
16gb|AC121564.4| Mus musculus BAC clone RP23-214I6 from 5, complet... 38 9.4
17gb|AC122824.3| Mus musculus BAC clone RP23-206D5 from 13, comple... 38 9.4
18emb|AL356319.18| Human DNA sequence from clone RP11-810G21 on ch... 38 9.4
19emb|AL353742.23| Human DNA sequence from clone RP11-505C13 on ch... 38 9.4
20emb|AL050338.12|HSJ899B16 Human DNA sequence from clone RP5-899B... 38 9.4
21gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosom... 38 9.4
22gb|AY090963.1| Arabidopsis thaliana At2g22570 mRNA sequence 38 9.4
23gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome... 38 9.4
24gb|AC078903.11| Homo sapiens chromosome 17, clone RP11-1084K4, c... 38 9.4
25gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 ma... 38 9.4
26gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map... 38 9.4
27gb|AC073535.3| Homo sapiens chromosome 19 clone CTD-2037K13, com... 38 9.4
28gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, compl... 38 9.4
29gb|AC008598.5| Homo sapiens chromosome 8 clone CTB-104J1, comple... 38 9.4
30gb|AC009126.2| Homo sapiens chromosome 5 clone RP11-496M2, compl... 38 9.4
31gb|AC022114.4| Homo sapiens chromosome 5 clone CTC-470L9, comple... 38 9.4
32gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome... 38 9.4
33gb|AC154429.4| Mus musculus BAC clone RP24-202G18 from chromosom... 38 9.4
34gb|AC026716.5|AC026716 Homo sapiens chromosome 5 clone CTD-2140M... 38 9.4
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.4
36gb|AC073541.4| Homo sapiens chromosome 19 clone RP11-21H14, comp... 38 9.4
37gb|AC100823.3| Homo sapiens chromosome 8, clone RP11-956J14, com... 38 9.4
38gb|AY084790.1| Arabidopsis thaliana clone 117955 mRNA, complete ... 38 9.4
39gb|AC009073.8|AC009073 Homo sapiens chromosome 16 clone RP11-31O... 38 9.4
40gb|AC155885.2| Medicago truncatula chromosome 7 BAC clone mth2-1... 38 9.4
41emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in... 38 9.4
42gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome 38 9.4
43dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 9.4
44emb|AL671935.30| Mouse DNA sequence from clone RP23-421J13 on ch... 38 9.4
45emb|CT571267.7| Mouse DNA sequence from clone RP23-258N11 on chr... 38 9.4
46gb|AC160642.2| Gallus gallus BAC clone CH261-121M12 from chromos... 38 9.4 
>emb|AL590398.9| Human DNA sequence from clone RP11-446G24 on chromosome 6 Contains the
             5' end of the HDAC2 gene for histone deacetylase 2 (human
             transcriptional regulator homolog RPD3, YAF1), two
             putative novel genes, a pseudogene similar to mouse D7Rp2e
             (DNA segment, Chr7, Roswell Park 2 complex, expressed) and
             a CpG island, complete sequence
          Length = 78366

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   ttgaaagaaaagagaggcaaa 130
             |||||||||||||||||||||
Sbjct: 12917 ttgaaagaaaagagaggcaaa 12937
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 163     caagggtctggttgatgacgggcgc 187
               |||||||||||| ||||||||||||
Sbjct: 4808975 caagggtctggtcgatgacgggcgc 4808951
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 0.60
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 163     caagggtctggttgatgacgggcgc 187
               |||||||||||| ||||||||||||
Sbjct: 4813886 caagggtctggtcgatgacgggcgc 4813862
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>gb|AF535436.1| HIV-1 isolate 88USMF880113sg from USA envelope glycoprotein (env)
          gene, partial cds
          Length = 602

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 39 aaccaaaatagtacagctga 58
          ||||||||||||||||||||
Sbjct: 49 aaccaaaatagtacagctga 68
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>gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, complete sequence
          Length = 162574

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     agcactttggaaacagtggg 23
             ||||||||||||||||||||
Sbjct: 36157 agcactttggaaacagtggg 36176
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>gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, complete sequence
          Length = 163550

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    tccacctcttcatgggaaattcag 102
             |||||||||||||||||| |||||
Sbjct: 47235 tccacctcttcatgggaatttcag 47258
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>gb|AC122538.4| Mus musculus BAC clone RP24-548J11 from 16, complete sequence
          Length = 209585

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    aattcagtccaaagttgaaagaaa 119
             |||||||||||||| |||||||||
Sbjct: 92931 aattcagtccaaagctgaaagaaa 92908
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>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b,
             complete sequence
          Length = 66866

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    taatccacctcttcatgggaaatt 99
             |||||||||||||||| |||||||
Sbjct: 36400 taatccacctcttcattggaaatt 36377
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>ref|NM_127823.1| Arabidopsis thaliana catalytic AT2G22570 transcript variant
           AT2G22570.1 mRNA, complete cds
          Length = 934

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 112 gaaagaaaagagaggcaaa 130
           |||||||||||||||||||
Sbjct: 850 gaaagaaaagagaggcaaa 832
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>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete
              sequence
          Length = 154558

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 107    aagttgaaagaaaagagag 125
              |||||||||||||||||||
Sbjct: 103207 aagttgaaagaaaagagag 103189
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 162     ccaagggtctggttgatga 180
               |||||||||||||||||||
Sbjct: 3320848 ccaagggtctggttgatga 3320866
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 107      aagttgaaagaaaagagag 125
                |||||||||||||||||||
Sbjct: 23266726 aagttgaaagaaaagagag 23266708
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 158    gtagccaagggtctggttg 176
              |||||||||||||||||||
Sbjct: 723082 gtagccaagggtctggttg 723100
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>gb|AC111008.6| Mus musculus BAC clone RP23-415J21 from chromosome 7, complete sequence
          Length = 193593

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 115   agaaaagagaggcaaatca 133
             |||||||||||||||||||
Sbjct: 60450 agaaaagagaggcaaatca 60432
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>gb|AC123033.4| Mus musculus BAC clone RP24-482F14 from chromosome 5, complete sequence
          Length = 180745

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 113    aaagaaaagagaggcaaat 131
              |||||||||||||||||||
Sbjct: 110536 aaagaaaagagaggcaaat 110518
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>gb|AC121564.4| Mus musculus BAC clone RP23-214I6 from 5, complete sequence
          Length = 190110

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     ggaaattcagtccaaagtt 111
              |||||||||||||||||||
Sbjct: 147939 ggaaattcagtccaaagtt 147921
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>gb|AC122824.3| Mus musculus BAC clone RP23-206D5 from 13, complete sequence
          Length = 195655

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 46  atagtacagctgagtcaca 64
           |||||||||||||||||||
Sbjct: 854 atagtacagctgagtcaca 872
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>emb|AL356319.18| Human DNA sequence from clone RP11-810G21 on chromosome 13 Contains a CpG
              island, complete sequence
          Length = 137260

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 103    tccaaagttgaaagaaaag 121
              |||||||||||||||||||
Sbjct: 130246 tccaaagttgaaagaaaag 130228
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>emb|AL353742.23| Human DNA sequence from clone RP11-505C13 on chromosome 9q31.1-32
             Contains part of a novel gene, complete sequence
          Length = 157657

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   aagttgaaagaaaagagag 125
             |||||||||||||||||||
Sbjct: 89401 aagttgaaagaaaagagag 89383
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>emb|AL050338.12|HSJ899B16 Human DNA sequence from clone RP5-899B16 on chromosome 6q23.2-24.3
             Contains two novel genes, complete sequence
          Length = 122564

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 8     ctttggaaacagtgggtgaaaca 30
             ||||||||||||||||| |||||
Sbjct: 30327 ctttggaaacagtgggttaaaca 30349
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>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence
          Length = 213870

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 115    agaaaagagaggcaaatca 133
              |||||||||||||||||||
Sbjct: 117309 agaaaagagaggcaaatca 117291
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>gb|AY090963.1| Arabidopsis thaliana At2g22570 mRNA sequence
          Length = 946

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 112 gaaagaaaagagaggcaaa 130
           |||||||||||||||||||
Sbjct: 845 gaaagaaaagagaggcaaa 827
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>gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome 16, complete sequence
          Length = 201384

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 112    gaaagaaaagagaggcaaa 130
              |||||||||||||||||||
Sbjct: 147339 gaaagaaaagagaggcaaa 147357
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>gb|AC078903.11| Homo sapiens chromosome 17, clone RP11-1084K4, complete sequence
          Length = 95359

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 2     acagcactttggaaacagtgggt 24
             |||| ||||||||||||||||||
Sbjct: 66761 acagaactttggaaacagtgggt 66783
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>gb|AC006592.6| Arabidopsis thaliana chromosome 2 clone F14M13 map mi238, complete
            sequence
          Length = 106949

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 112  gaaagaaaagagaggcaaa 130
            |||||||||||||||||||
Sbjct: 4764 gaaagaaaagagaggcaaa 4746
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>gb|AC006340.5| Arabidopsis thaliana chromosome 2 clone T9I22 map CIC06C07,
           complete sequence
          Length = 95375

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 112 gaaagaaaagagaggcaaa 130
           |||||||||||||||||||
Sbjct: 23  gaaagaaaagagaggcaaa 41
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>gb|AC073535.3| Homo sapiens chromosome 19 clone CTD-2037K13, complete sequence
          Length = 150840

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      cagcactttggaaacagtg 21
              |||||||||||||||||||
Sbjct: 129667 cagcactttggaaacagtg 129685
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>gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, complete sequence
          Length = 133225

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 110   ttgaaagaaaagagaggca 128
             |||||||||||||||||||
Sbjct: 45365 ttgaaagaaaagagaggca 45347
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>gb|AC008598.5| Homo sapiens chromosome 8 clone CTB-104J1, complete sequence
          Length = 80068

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    ttgaaccaaaatagtacag 54
             |||||||||||||||||||
Sbjct: 65637 ttgaaccaaaatagtacag 65619
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>gb|AC009126.2| Homo sapiens chromosome 5 clone RP11-496M2, complete sequence
          Length = 177978

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    gaggcaaatcacacaatcc 141
              |||||||||||||||||||
Sbjct: 121479 gaggcaaatcacacaatcc 121461
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>gb|AC022114.4| Homo sapiens chromosome 5 clone CTC-470L9, complete sequence
          Length = 102387

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   gaggcaaatcacacaatcc 141
             |||||||||||||||||||
Sbjct: 72298 gaggcaaatcacacaatcc 72316
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>gb|AC161378.2| Mus musculus BAC clone RP23-202A6 from chromosome 16, complete sequence
          Length = 219298

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 114   aagaaaagagaggcaaatc 132
             |||||||||||||||||||
Sbjct: 69300 aagaaaagagaggcaaatc 69282
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>gb|AC154429.4| Mus musculus BAC clone RP24-202G18 from chromosome 16, complete
             sequence
          Length = 170875

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 114   aagaaaagagaggcaaatc 132
             |||||||||||||||||||
Sbjct: 23837 aagaaaagagaggcaaatc 23819
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>gb|AC026716.5|AC026716 Homo sapiens chromosome 5 clone CTD-2140M5, complete sequence
          Length = 115383

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 110   ttgaaagaaaagagaggca 128
             |||||||||||||||||||
Sbjct: 63469 ttgaaagaaaagagaggca 63451
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 107      aagttgaaagaaaagagag 125
                |||||||||||||||||||
Sbjct: 23259754 aagttgaaagaaaagagag 23259736
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>gb|AC073541.4| Homo sapiens chromosome 19 clone RP11-21H14, complete sequence
          Length = 176941

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     cagcactttggaaacagtg 21
             |||||||||||||||||||
Sbjct: 30292 cagcactttggaaacagtg 30310
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>gb|AC100823.3| Homo sapiens chromosome 8, clone RP11-956J14, complete sequence
          Length = 191937

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     ttgaaccaaaatagtacag 54
              |||||||||||||||||||
Sbjct: 142738 ttgaaccaaaatagtacag 142756
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>gb|AY084790.1| Arabidopsis thaliana clone 117955 mRNA, complete sequence
          Length = 935

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 112 gaaagaaaagagaggcaaa 130
           |||||||||||||||||||
Sbjct: 850 gaaagaaaagagaggcaaa 832
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>gb|AC009073.8|AC009073 Homo sapiens chromosome 16 clone RP11-31O11, complete sequence
          Length = 177978

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    gaggcaaatcacacaatcc 141
              |||||||||||||||||||
Sbjct: 121479 gaggcaaatcacacaatcc 121461
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>gb|AC155885.2| Medicago truncatula chromosome 7 BAC clone mth2-10p23, complete
            sequence
          Length = 116747

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 164  aagggtctggttgatgacg 182
            |||||||||||||||||||
Sbjct: 5482 aagggtctggttgatgacg 5500
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>emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in linkage group 5,
             complete sequence
          Length = 172861

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 97    attcagtccaaagttgaaagaaaagag 123
             ||||||||| ||||| |||||||||||
Sbjct: 71052 attcagtcctaagttaaaagaaaagag 71078
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>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome
          Length = 996422

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     aaacgattgaaccaaaata 48
              |||||||||||||||||||
Sbjct: 387957 aaacgattgaaccaaaata 387939
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>dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688I9, complete
              sequence
          Length = 175562

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 108    agttgaaagaaaagagagg 126
              |||||||||||||||||||
Sbjct: 109621 agttgaaagaaaagagagg 109603
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>emb|AL671935.30| Mouse DNA sequence from clone RP23-421J13 on chromosome X, complete
             sequence
          Length = 194258

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 110   ttgaaagaaaagagaggca 128
             |||||||||||||||||||
Sbjct: 14228 ttgaaagaaaagagaggca 14246
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>emb|CT571267.7| Mouse DNA sequence from clone RP23-258N11 on chromosome 13, complete
             sequence
          Length = 183963

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    atagtacagctgagtcaca 64
             |||||||||||||||||||
Sbjct: 82593 atagtacagctgagtcaca 82575
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>gb|AC160642.2| Gallus gallus BAC clone CH261-121M12 from chromosome unknown, complete
              sequence
          Length = 200333

 Score = 38.2 bits (19), Expect = 9.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     tcatgggaaattcagtcca 106
              |||||||||||||||||||
Sbjct: 140498 tcatgggaaattcagtcca 140516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,819,476
Number of Sequences: 3902068
Number of extensions: 2819476
Number of successful extensions: 213160
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 212870
Number of HSP's gapped (non-prelim): 290
length of query: 190
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 168
effective length of database: 17,147,199,772
effective search space: 2880729561696
effective search space used: 2880729561696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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