ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62g21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468453.1| Oryza sativa (japonica cultivar-group), mRNA 137 3e-29
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
3dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
4dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
5dbj|AK099610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
6dbj|AK065330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
7ref|NM_196747.1| Oryza sativa (japonica cultivar-group) contains... 46 0.073
8gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete... 46 0.073
9gb|AC093440.2| Drosophila melanogaster clone BACR34H03, complete... 46 0.073
10gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complet... 46 0.073
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.073
12gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) ch... 46 0.073
13dbj|AK072242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.073
14gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76... 46 0.073
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.073
16gb|AC002442.1|AC002442 Drosophila melanogaster DNA sequence (P1 ... 46 0.073
17gb|AC023122.9| Homo sapiens BAC clone RP11-297L21 from 3, comple... 44 0.29
18ref|XM_641631.1| Dictyostelium discoideum hypothetical protein (... 42 1.1
19gb|AC132424.3| Mus musculus BAC clone RP23-310P13 from chromosom... 42 1.1
20gb|AC125320.4| Mus musculus BAC clone RP23-351P13 from chromosom... 42 1.1
21gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, co... 42 1.1
22emb|AL365220.24| Human DNA sequence from clone RP4-735N21 on chr... 42 1.1
23emb|AL353751.13| Human DNA sequence from clone RP11-149I23 on ch... 42 1.1
24emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in ... 42 1.1
25gb|AC084360.20| Homo sapiens 12 BAC RP11-76B1 (Roswell Park Canc... 42 1.1
26emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 i... 42 1.1
27dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.1
28emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H1... 42 1.1
29gb|AC007447.6|AC007447 Homo sapiens, clone hRPK.76_A_1, complete... 42 1.1
30emb|X75492.1|HSLIPA5 H.sapiens LIPA gene, exon 5 42 1.1
31gb|U04289.1|HSLIPCHL05 Human lysosomal acid lipase, cholesteryl ... 42 1.1
32gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 4.5
33gb|AC110499.19| Mus musculus chromosome 1, clone RP23-202J6, com... 40 4.5
34gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete... 40 4.5
35gb|AE009365.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 4.5
36gb|AE008248.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 4.5
37gb|AC157771.8| Mus musculus chromosome 1, clone RP24-287N8, comp... 40 4.5
38gb|AC025723.2| Caenorhabditis elegans cosmid Y54F10AM, complete ... 40 4.5
39gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosom... 40 4.5
40gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, comple... 40 4.5
41emb|CR724695.1|CNS0GM4D Tetraodon nigroviridis full-length cDNA 40 4.5
42gb|AY232049.1| Drosophila yakuba clone yak-ad_bic mRNA sequence 40 4.5
43gb|AC145966.2| Pan troglodytes BAC clone RP43-17M9 from 7, compl... 40 4.5
44gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, comp... 40 4.5
45gb|AC024813.2| Caenorhabditis elegans cosmid Y54F10AL, complete ... 40 4.5
46emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chro... 40 4.5
47emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chro... 40 4.5
48emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chro... 40 4.5
49emb|AL596266.3| Human DNA sequence from clone RP11-2L13 on chrom... 40 4.5
50gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4... 40 4.5
51emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on ch... 40 4.5
52emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chr... 40 4.5
53emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 4.5
54emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chr... 40 4.5
55emb|CR558303.7| Zebrafish DNA sequence from clone CH211-183C15 i... 40 4.5
56emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 i... 40 4.5
57gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, com... 40 4.5
58ref|NM_165954.1| Drosophila melanogaster bicaudal CG3644-RB, tra... 40 4.5
59dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.5
60ref|NM_057505.3| Drosophila melanogaster bicaudal CG3644-RA, tra... 40 4.5
61gb|AY070860.1| Drosophila melanogaster GM13744 full length cDNA 40 4.5
62gb|AC026782.6| Homo sapiens chromosome 5 clone CTD-2015A6, compl... 40 4.5
63gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, comple... 40 4.5
64gb|AC110078.2| Homo sapiens BAC clone RP11-358N5 from 2, complet... 40 4.5
65gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, compl... 40 4.5
66emb|BX004771.6| Zebrafish DNA sequence from clone CH211-112I15 i... 40 4.5
67gb|AF151116.1|AF151116 Drosophila melanogaster beta NAC homolog ... 40 4.5
68emb|BX005369.11| Zebrafish DNA sequence from clone CH211-51H13 i... 40 4.5
69dbj|AK058620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
70emb|Z78059.1|CEC34B4 Caenorhabditis elegans Cosmid C34B4, comple... 40 4.5
71gb|AF160890.1|AF160890 Drosophila melanogaster clone GM05329 BcD... 40 4.5
72gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30... 40 4.5
73gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.5
74gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 40 4.5
75emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chr... 40 4.5
76emb|AL844208.5| Mouse DNA sequence from clone RP23-354D14 on chr... 40 4.5
77emb|AL590674.5| Human DNA sequence from clone RP11-286N24 on chr... 40 4.5
78emb|AL805920.7| Mouse DNA sequence from clone RP23-162M7 on chro... 40 4.5 
>ref|XM_468453.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2588

 Score =  137 bits (69), Expect = 3e-29
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttcagttgctcttgatgagcagcaggccgatgccggtgacgatgagcgttgccgggaagc 293
            ||||||||||  |||||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 2223 ttcagttgcttctgatgagcagtaggccaatcccggtgacgatgagcgtcgccgggaagc 2164

                                                       
Query: 294  cgaactggaggtggctgaagaagganagggtgtanccgaactg 336
            ||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct: 2163 cgaactggaggtggctgaagaaggagagggtgtatccgtactg 2121
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 3e-29
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                            
Query: 234      ttcagttgctcttgatgagcagcaggccgatgccggtgacgatgagcgttgccgggaagc 293
                ||||||||||  |||||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 35308819 ttcagttgcttctgatgagcagtaggccaatcccggtgacgatgagcgtcgccgggaagc 35308760

                                                           
Query: 294      cgaactggaggtggctgaagaagganagggtgtanccgaactg 336
                ||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct: 35308759 cgaactggaggtggctgaagaaggagagggtgtatccgtactg 35308717
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>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score =  137 bits (69), Expect = 3e-29
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                         
Query: 234   ttcagttgctcttgatgagcagcaggccgatgccggtgacgatgagcgttgccgggaagc 293
             ||||||||||  |||||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 59153 ttcagttgcttctgatgagcagtaggccaatcccggtgacgatgagcgtcgccgggaagc 59094

                                                        
Query: 294   cgaactggaggtggctgaagaagganagggtgtanccgaactg 336
             ||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct: 59093 cgaactggaggtggctgaagaaggagagggtgtatccgtactg 59051
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0474F11
          Length = 139544

 Score =  137 bits (69), Expect = 3e-29
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                          
Query: 234    ttcagttgctcttgatgagcagcaggccgatgccggtgacgatgagcgttgccgggaagc 293
              ||||||||||  |||||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 120869 ttcagttgcttctgatgagcagtaggccaatcccggtgacgatgagcgtcgccgggaagc 120810

                                                         
Query: 294    cgaactggaggtggctgaagaagganagggtgtanccgaactg 336
              ||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct: 120809 cgaactggaggtggctgaagaaggagagggtgtatccgtactg 120767
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>dbj|AK099610.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049H16, full
            insert sequence
          Length = 1745

 Score =  137 bits (69), Expect = 3e-29
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttcagttgctcttgatgagcagcaggccgatgccggtgacgatgagcgttgccgggaagc 293
            ||||||||||  |||||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 1366 ttcagttgcttctgatgagcagtaggccaatcccggtgacgatgagcgtcgccgggaagc 1307

                                                       
Query: 294  cgaactggaggtggctgaagaagganagggtgtanccgaactg 336
            ||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct: 1306 cgaactggaggtggctgaagaaggagagggtgtatccgtactg 1264
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>dbj|AK065330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A03, full
            insert sequence
          Length = 2588

 Score =  137 bits (69), Expect = 3e-29
 Identities = 94/103 (91%)
 Strand = Plus / Minus

                                                                        
Query: 234  ttcagttgctcttgatgagcagcaggccgatgccggtgacgatgagcgttgccgggaagc 293
            ||||||||||  |||||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 2223 ttcagttgcttctgatgagcagtaggccaatcccggtgacgatgagcgtcgccgggaagc 2164

                                                       
Query: 294  cgaactggaggtggctgaagaagganagggtgtanccgaactg 336
            ||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct: 2163 cgaactggaggtggctgaagaaggagagggtgtatccgtactg 2121
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>ref|NM_196747.1| Oryza sativa (japonica cultivar-group) contains similarity to anion
            transporter (OSJNBa0076M18.1), mRNA
          Length = 1584

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 257  aggccgatgccggtgacgatgagcgttgccgggaagccgaactggaggtggctgaagaag 316
            ||||||||| |||||||||||| ||| | ||| | ||||||  ||||||||||  |||||
Sbjct: 1562 aggccgatggcggtgacgatgatcgtcgacggcacgccgaagcggaggtggctccagaag 1503

                             
Query: 317  ganagggtgtanccgaa 333
            |  ||| |||| |||||
Sbjct: 1502 gtgaggttgtacccgaa 1486
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>gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete sequence
          Length = 182901

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 144    taaaatttacatacatacctata 166
              |||||||||||||||||||||||
Sbjct: 181522 taaaatttacatacatacctata 181500
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>gb|AC093440.2| Drosophila melanogaster clone BACR34H03, complete sequence
          Length = 192132

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 144   taaaatttacatacatacctata 166
             |||||||||||||||||||||||
Sbjct: 46040 taaaatttacatacatacctata 46018
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>gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complete sequence
          Length = 174735

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 144    taaaatttacatacatacctata 166
              |||||||||||||||||||||||
Sbjct: 120232 taaaatttacatacatacctata 120210
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 257      aggccgatgccggtgacgatgagcgttgccgggaagccgaactggaggtggctgaagaag 316
                ||||||||| |||||||||||| ||| | ||| | ||||||  ||||||||||  |||||
Sbjct: 15724153 aggccgatggcggtgacgatgatcgtcgacggcacgccgaagcggaggtggctccagaag 15724094

                                 
Query: 317      ganagggtgtanccgaa 333
                |  ||| |||| |||||
Sbjct: 15724093 gtgaggttgtacccgaa 15724077
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>gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0076M18,
             complete sequence
          Length = 132647

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 257   aggccgatgccggtgacgatgagcgttgccgggaagccgaactggaggtggctgaagaag 316
             ||||||||| |||||||||||| ||| | ||| | ||||||  ||||||||||  |||||
Sbjct: 19113 aggccgatggcggtgacgatgatcgtcgacggcacgccgaagcggaggtggctccagaag 19054

                              
Query: 317   ganagggtgtanccgaa 333
             |  ||| |||| |||||
Sbjct: 19053 gtgaggttgtacccgaa 19037
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>dbj|AK072242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169G24, full
            insert sequence
          Length = 2513

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 257  aggccgatgccggtgacgatgagcgttgccgggaagccgaactggaggtggctgaagaag 316
            ||||||||| |||||||||||| ||| | ||| | ||||||  ||||||||||  |||||
Sbjct: 1989 aggccgatggcggtgacgatgatcgtcgacggcacgccgaagcggaggtggctccagaag 1930

                             
Query: 317  ganagggtgtanccgaa 333
            |  ||| |||| |||||
Sbjct: 1929 gtgaggttgtacccgaa 1913
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>gb|AE003667.3| Drosophila melanogaster chromosome 2L, section 76 of 83 of the
            complete sequence
          Length = 257666

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 144  taaaatttacatacatacctata 166
            |||||||||||||||||||||||
Sbjct: 9032 taaaatttacatacatacctata 9010
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 257      aggccgatgccggtgacgatgagcgttgccgggaagccgaactggaggtggctgaagaag 316
                ||||||||| |||||||||||| ||| | ||| | ||||||  ||||||||||  |||||
Sbjct: 15732394 aggccgatggcggtgacgatgatcgtcgacggcacgccgaagcggaggtggctccagaag 15732335

                                 
Query: 317      ganagggtgtanccgaa 333
                |  ||| |||| |||||
Sbjct: 15732334 gtgaggttgtacccgaa 15732318
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>gb|AC002442.1|AC002442 Drosophila melanogaster DNA sequence (P1 DS08416 (D52)), complete
             sequence
          Length = 79323

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 144   taaaatttacatacatacctata 166
             |||||||||||||||||||||||
Sbjct: 24748 taaaatttacatacatacctata 24726
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>gb|AC023122.9| Homo sapiens BAC clone RP11-297L21 from 3, complete sequence
          Length = 178642

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 135   cacaatttttaaaatttacatacata 160
             |||| |||||||||||||||||||||
Sbjct: 36467 cacattttttaaaatttacatacata 36442
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>ref|XM_641631.1| Dictyostelium discoideum hypothetical protein (DDB0190983), partial
            mRNA
          Length = 4644

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 127  ccaacattcacaatttttaaaattt 151
            |||||||| ||||||||||||||||
Sbjct: 1361 ccaacatttacaatttttaaaattt 1337
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>gb|AC132424.3| Mus musculus BAC clone RP23-310P13 from chromosome 15, complete sequence
          Length = 199655

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 139    atttttaaaatttacatacat 159
              |||||||||||||||||||||
Sbjct: 194261 atttttaaaatttacatacat 194281
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>gb|AC125320.4| Mus musculus BAC clone RP23-351P13 from chromosome 15, complete sequence
          Length = 229480

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 139    atttttaaaatttacatacat 159
              |||||||||||||||||||||
Sbjct: 209914 atttttaaaatttacatacat 209894
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>gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, complete sequence
          Length = 195790

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     ccaccatgaatgtcatcatcc 59
              |||||||||||||||||||||
Sbjct: 116674 ccaccatgaatgtcatcatcc 116694
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>emb|AL365220.24| Human DNA sequence from clone RP4-735N21 on chromosome 1p21.2-22.2
              Contains a novel pseudogene, complete sequence
          Length = 113028

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 130    acattcacaatttttaaaatt 150
              |||||||||||||||||||||
Sbjct: 111158 acattcacaatttttaaaatt 111138
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>emb|AL353751.13| Human DNA sequence from clone RP11-149I23 on chromosome 10 Contains
            the 5' end of the LIPA gene for lipase A lysosomal acid
            cholesterol esterase (Wolman disease), a novel gene, the
            IFIT2 gene for interferon-induced protein with
            tetratricopeptide repeats 2, the IFIT4 gene for
            interferon-induced protein with tetratricopeptide repeats
            4, an interferon-induced protein with tetratricopeptide
            repeats 1 (IFIT1) pseudogene, the gene for a novel
            protein similar to interferon-induced protein with
            tetratricopeptide repeats 1 (IFIT1) and a CpG island,
            complete sequence
          Length = 169404

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 148  atttacatacatacctatagt 168
            |||||||||||||||||||||
Sbjct: 5424 atttacatacatacctatagt 5444
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>emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in linkage group 14,
              complete sequence
          Length = 166194

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 135    cacaatttttaaaatttacat 155
              |||||||||||||||||||||
Sbjct: 117525 cacaatttttaaaatttacat 117505
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>gb|AC084360.20| Homo sapiens 12 BAC RP11-76B1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 61608

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 137   caatttttaaaatttacatacatac 161
             |||| ||||||||||||||||||||
Sbjct: 37437 caatatttaaaatttacatacatac 37461
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>emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 in linkage group 17,
              complete sequence
          Length = 181677

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    cattcacaatttttaaaattt 151
              |||||||||||||||||||||
Sbjct: 103247 cattcacaatttttaaaattt 103267
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 249     tgagcagcaggccgatgccgg 269
               |||||||||||||||||||||
Sbjct: 2339685 tgagcagcaggccgatgccgg 2339705
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>emb|AL442638.3|HS570H19 Homo sapiens chromosome 9 BAC RP11-570H19, complete sequence
          Length = 188247

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    tttttaaaatttacatacata 160
              |||||||||||||||||||||
Sbjct: 124081 tttttaaaatttacatacata 124061
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>gb|AC007447.6|AC007447 Homo sapiens, clone hRPK.76_A_1, complete sequence
          Length = 155210

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 137   caatttttaaaatttacatacatac 161
             |||| ||||||||||||||||||||
Sbjct: 37438 caatatttaaaatttacatacatac 37462
to top
>emb|X75492.1|HSLIPA5 H.sapiens LIPA gene, exon 5
          Length = 796

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 148 atttacatacatacctatagt 168
           |||||||||||||||||||||
Sbjct: 362 atttacatacatacctatagt 342
to top
>gb|U04289.1|HSLIPCHL05 Human lysosomal acid lipase, cholesteryl ester hydrolase (LIPA)
           gene, exon 5
          Length = 362

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 148 atttacatacatacctatagt 168
           |||||||||||||||||||||
Sbjct: 254 atttacatacatacctatagt 234
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 256     caggccgatgccggtgacga 275
               ||||||||||||||||||||
Sbjct: 4296490 caggccgatgccggtgacga 4296471
to top
>gb|AC110499.19| Mus musculus chromosome 1, clone RP23-202J6, complete sequence
          Length = 212282

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   caatttttaaaatttacata 156
             ||||||||||||||||||||
Sbjct: 70672 caatttttaaaatttacata 70653
to top
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence
          Length = 182105

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    gccgatgccggtgacgatga 278
              ||||||||||||||||||||
Sbjct: 134064 gccgatgccggtgacgatga 134083
to top
>gb|AE009365.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 135 of
             187 of the complete sequence
          Length = 10684

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   gcagcaggccgatgccggtg 271
             ||||||||||||||||||||
Sbjct: 10597 gcagcaggccgatgccggtg 10616
to top
>gb|AE008248.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 52 of
            187 of the complete sequence
          Length = 13670

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  gcagcaggccgatgccggtg 271
            ||||||||||||||||||||
Sbjct: 6459 gcagcaggccgatgccggtg 6440
to top
>gb|AC157771.8| Mus musculus chromosome 1, clone RP24-287N8, complete sequence
          Length = 189621

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    caatttttaaaatttacata 156
              ||||||||||||||||||||
Sbjct: 110354 caatttttaaaatttacata 110335
to top
>gb|AC025723.2| Caenorhabditis elegans cosmid Y54F10AM, complete sequence
          Length = 77422

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  attcacaatttttaaaattt 151
            ||||||||||||||||||||
Sbjct: 4154 attcacaatttttaaaattt 4135
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>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete
             sequence
          Length = 175727

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ttcacaatttttaaaattta 152
             ||||||||||||||||||||
Sbjct: 16883 ttcacaatttttaaaattta 16902
to top
>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence
          Length = 179390

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    ttcacaatttttaaaattta 152
              ||||||||||||||||||||
Sbjct: 133107 ttcacaatttttaaaattta 133126
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>emb|CR724695.1|CNS0GM4D Tetraodon nigroviridis full-length cDNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 aacattcacaatttttaaaa 148
           ||||||||||||||||||||
Sbjct: 863 aacattcacaatttttaaaa 844
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>gb|AY232049.1| Drosophila yakuba clone yak-ad_bic mRNA sequence
          Length = 465

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 gccgatgccggtgacgatga 278
           ||||||||||||||||||||
Sbjct: 403 gccgatgccggtgacgatga 422
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>gb|AC145966.2| Pan troglodytes BAC clone RP43-17M9 from 7, complete sequence
          Length = 197140

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   atttttaaaatttacataca 158
             ||||||||||||||||||||
Sbjct: 88201 atttttaaaatttacataca 88182
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>gb|AC100120.9| Mus musculus chromosome 10, clone RP23-40I1, complete sequence
          Length = 236895

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 78469 acaatttttaaaatttacat 78450
to top
>gb|AC024813.2| Caenorhabditis elegans cosmid Y54F10AL, complete sequence
          Length = 21520

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   attcacaatttttaaaattt 151
             ||||||||||||||||||||
Sbjct: 19674 attcacaatttttaaaattt 19655
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>emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chromosome 9 Contains the 5'
              end of the gene for a novel protein similar to contactin
              associated protein-like 3 (CNTNAP3) and a CpG island,
              complete sequence
          Length = 187005

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    acaatttttaaaatttacat 155
              ||||||||||||||||||||
Sbjct: 161027 acaatttttaaaatttacat 161008
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>emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chromosome 9 Contains part
             of the gene for a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 162657

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 96982 acaatttttaaaatttacat 97001
to top
>emb|BX088645.7| Human DNA sequence from clone RP11-74L19 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated protein
             family, a novel pseudogene and a CpG island, complete
             sequence
          Length = 152623

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 82702 acaatttttaaaatttacat 82721
to top
>emb|AL596266.3| Human DNA sequence from clone RP11-2L13 on chromosome 1 Contains a
             translational inhibitor protein p14.5 (UK114) pseudogene,
             complete sequence
          Length = 128479

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   cctatagtatatccatatga 180
             ||||||||||||||||||||
Sbjct: 96423 cctatagtatatccatatga 96442
to top
>gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete
             sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   tatagtatatccatatgaat 182
             ||||||||||||||||||||
Sbjct: 93434 tatagtatatccatatgaat 93453
to top
>emb|AL162501.11| Human DNA sequence from clone RP11-138L21 on chromosome 9 Contains the
             5' end of the CNTNAP3 gene for a contactin associated
             protein-like 3 and two CpG islands, complete sequence
          Length = 118564

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 37078 acaatttttaaaatttacat 37059
to top
>emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated
             protein-like 3 (CNTNAP3), an RNA binding motif protein 17
             (RBM17) pseudogene and a CpG island, complete sequence
          Length = 179833

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 45393 acaatttttaaaatttacat 45374
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    attcacaatttttaaaattt 151
              ||||||||||||||||||||
Sbjct: 589297 attcacaatttttaaaattt 589278
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>emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chromosome 11 Contains the
             3' end of the Myo1d gene for myosin ID, two novel genes,
             the Cdk5r gene for cyclin-dependent kinase 5 regulatory
             subunit (p35), the Psmd11 gene for non-ATPase proteasome
             (prosome, macropain) 26S subunit 11, the Zfp207 gene for
             zinc finger protein 207 and the 3' end of the Rhbdl4 gene
             for rhomboid veinlet-like 4 (Drosophila), complete
             sequence
          Length = 195208

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ttcacaatttttaaaattta 152
             ||||||||||||||||||||
Sbjct: 57691 ttcacaatttttaaaattta 57672
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>emb|CR558303.7| Zebrafish DNA sequence from clone CH211-183C15 in linkage group 13,
              complete sequence
          Length = 155098

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    tttttaaaatttacatacat 159
              ||||||||||||||||||||
Sbjct: 139719 tttttaaaatttacatacat 139738
to top
>emb|CR318632.9| Zebrafish DNA sequence from clone CH211-113N10 in linkage group 5,
              complete sequence
          Length = 143278

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    tttttaaaatttacatacat 159
              ||||||||||||||||||||
Sbjct: 113995 tttttaaaatttacatacat 114014
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>gb|AC104209.7| Homo sapiens chromosome 18, clone RP11-653G8, complete sequence
          Length = 210849

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    attcacaatttttaaaattt 151
              ||||||||||||||||||||
Sbjct: 161629 attcacaatttttaaaattt 161648
to top
>ref|NM_165954.1| Drosophila melanogaster bicaudal CG3644-RB, transcript variant B
           (bic), mRNA
          Length = 1849

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 gccgatgccggtgacgatga 278
           ||||||||||||||||||||
Sbjct: 551 gccgatgccggtgacgatga 570
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     gccgatgccggtgacgatga 278
               ||||||||||||||||||||
Sbjct: 2339775 gccgatgccggtgacgatga 2339794



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    caggccgatgccggtgacga 275
              ||||||||||||||||||||
Sbjct: 291085 caggccgatgccggtgacga 291066
to top
>ref|NM_057505.3| Drosophila melanogaster bicaudal CG3644-RA, transcript variant A
           (bic), mRNA
          Length = 1795

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 gccgatgccggtgacgatga 278
           ||||||||||||||||||||
Sbjct: 497 gccgatgccggtgacgatga 516
to top
>gb|AY070860.1| Drosophila melanogaster GM13744 full length cDNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 gccgatgccggtgacgatga 278
           ||||||||||||||||||||
Sbjct: 467 gccgatgccggtgacgatga 486
to top
>gb|AC026782.6| Homo sapiens chromosome 5 clone CTD-2015A6, complete sequence
          Length = 214025

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   tgataatcatgatcctctcc 231
             ||||||||||||||||||||
Sbjct: 14531 tgataatcatgatcctctcc 14512
to top
>gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, complete sequence
          Length = 190018

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    caatttttaaaatttacata 156
              ||||||||||||||||||||
Sbjct: 161592 caatttttaaaatttacata 161611
to top
>gb|AC110078.2| Homo sapiens BAC clone RP11-358N5 from 2, complete sequence
          Length = 196117

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 97039 acaatttttaaaatttacat 97058
to top
>gb|AC099066.3| Homo sapiens chromosome 1 clone RP11-145A3, complete sequence
          Length = 149549

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   atttttaaaatttacataca 158
             ||||||||||||||||||||
Sbjct: 97365 atttttaaaatttacataca 97384
to top
>emb|BX004771.6| Zebrafish DNA sequence from clone CH211-112I15 in linkage group 24,
             complete sequence
          Length = 167345

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ttcacaatttttaaaattta 152
             ||||||||||||||||||||
Sbjct: 48879 ttcacaatttttaaaattta 48898
to top
>gb|AF151116.1|AF151116 Drosophila melanogaster beta NAC homolog (bic) gene, bic-1 allele,
            complete cds
          Length = 4211

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  gccgatgccggtgacgatga 278
            ||||||||||||||||||||
Sbjct: 1762 gccgatgccggtgacgatga 1781
to top
>emb|BX005369.11| Zebrafish DNA sequence from clone CH211-51H13 in linkage group 3,
             complete sequence
          Length = 187523

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    atgaatgtcatcatccgtgc 63
             ||||||||||||||||||||
Sbjct: 40017 atgaatgtcatcatccgtgc 39998
to top
>dbj|AK058620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B07, full
           insert sequence
          Length = 1587

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 caggccgatgccggtgacga 275
           ||||||||||||||||||||
Sbjct: 939 caggccgatgccggtgacga 920
to top
>emb|Z78059.1|CEC34B4 Caenorhabditis elegans Cosmid C34B4, complete sequence
          Length = 42042

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 23964 acaatttttaaaatttacat 23983
to top
>gb|AF160890.1|AF160890 Drosophila melanogaster clone GM05329 BcDNA.GM05329 (BcDNA.GM05329)
           mRNA, complete cds
          Length = 1030

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 gccgatgccggtgacgatga 278
           ||||||||||||||||||||
Sbjct: 567 gccgatgccggtgacgatga 586
to top
>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete
             sequence
          Length = 263912

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   gccgatgccggtgacgatga 278
             ||||||||||||||||||||
Sbjct: 55039 gccgatgccggtgacgatga 55058
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     tgagcagcaggccgatgccg 268
               ||||||||||||||||||||
Sbjct: 4774286 tgagcagcaggccgatgccg 4774305
to top
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    gagcagcaggccgatgccgg 269
              ||||||||||||||||||||
Sbjct: 342434 gagcagcaggccgatgccgg 342453
to top
>emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chromosome 9, complete
             sequence
          Length = 146143

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   acaatttttaaaatttacat 155
             ||||||||||||||||||||
Sbjct: 48873 acaatttttaaaatttacat 48854
to top
>emb|AL844208.5| Mouse DNA sequence from clone RP23-354D14 on chromosome 4, complete
              sequence
          Length = 206842

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    caatttttaaaatttacata 156
              ||||||||||||||||||||
Sbjct: 192992 caatttttaaaatttacata 192973
to top
>emb|AL590674.5| Human DNA sequence from clone RP11-286N24 on chromosome 1, complete
             sequence
          Length = 114056

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   cctatagtatatccatatga 180
             ||||||||||||||||||||
Sbjct: 97140 cctatagtatatccatatga 97159
to top
>emb|AL805920.7| Mouse DNA sequence from clone RP23-162M7 on chromosome X, complete
             sequence
          Length = 125192

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                            
Query: 138   aatttttaaaattta--catacatacctata 166
             |||||||||||||||  ||||||||||||||
Sbjct: 53516 aatttttaaaatttatacatacatacctata 53546


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,818,934
Number of Sequences: 3902068
Number of extensions: 3818934
Number of successful extensions: 91198
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 90785
Number of HSP's gapped (non-prelim): 413
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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