>PYRD_NEIMB (Q9K1D7) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 335

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 237 NLYINLISPIHSTAPEYLIXWVSCLSQVIYMTIIIFSP 350
           N+  N ++PI + A +YLI      +   Y+T+ I SP
Sbjct: 136 NIGKNAVTPIENAADDYLICLEKAYAHASYITVNISSP 173

>PYRD_NEIMA (Q9JX66) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 335

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 237 NLYINLISPIHSTAPEYLIXWVSCLSQVIYMTIIIFSP 350
           N+  N ++PI + A +YLI      +   Y+T+ I SP
Sbjct: 136 NIGKNAVTPIENAADDYLICLEKAYAHASYITVNISSP 173

>PYRD_NEIG1 (Q5F605) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 335

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 237 NLYINLISPIHSTAPEYLIXWVSCLSQVIYMTIIIFSP 350
           N+  N ++PI + A +YLI      +   Y+T+ I SP
Sbjct: 136 NIGKNAVTPIQNAADDYLICLEKAYAHASYITVNISSP 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,185,579
Number of Sequences: 219361
Number of extensions: 1110789
Number of successful extensions: 1534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)