ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62g16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478915.1| Oryza sativa (japonica cultivar-group), mRNA 383 e-103
2dbj|AK121109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 383 e-103
3dbj|AK067725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 383 e-103
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 293 2e-76
5dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D... 293 2e-76
6gb|BT016400.1| Zea mays clone Contig233 mRNA sequence 289 4e-75
7gb|AY106359.1| Zea mays PCO114626 mRNA sequence 276 5e-71
8gb|BT018748.1| Zea mays clone EL01N0522F03.d mRNA sequence 46 0.091
9gb|AY107935.1| Zea mays PCO066270 mRNA sequence 46 0.091
10gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete s... 44 0.36
11gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete se... 44 0.36
12gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete seq... 44 0.36
13emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, co... 42 1.4
14gb|AC087385.5| Homo sapiens chromosome 15, clone RP11-745A24, co... 42 1.4
15gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 42 1.4
16gb|AC170813.3| Rhesus Macaque BAC CH250-421G6 (Children's Hospi... 42 1.4
17gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, comp... 40 5.6
18gb|AY486475.1|AY486470S06 Human herpesvirus 5 strain Toledo geno... 40 5.6
19gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete seq... 40 5.6
20gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete ... 40 5.6
21gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete s... 40 5.6
22gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome 40 5.6
23gb|AC156281.4| Mus musculus 6 BAC RP24-311B6 (Roswell Park Cance... 40 5.6
24gb|AF309999.1| Human herpesvirus 5 isolate CR structural glycopr... 40 5.6
25gb|AF309998.1| Human herpesvirus 5 isolate LV structural glycopr... 40 5.6
26gb|AF309997.1| Human herpesvirus 5 isolate BR structural glycopr... 40 5.6
27gb|AF309996.1| Human herpesvirus 5 isolate SE structural glycopr... 40 5.6
28gb|AF309995.1| Human herpesvirus 5 isolate RL structural glycopr... 40 5.6
29gb|AF309993.1| Human herpesvirus 5 isolate HDu structural glycop... 40 5.6
30gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, comple... 40 5.6
31gb|AF390790.1| Human herpesvirus 5 isolate VT structural glycopr... 40 5.6
32gb|AF390785.1| Human herpesvirus 5 isolate MD structural glycopr... 40 5.6
33gb|AF390782.1| Human herpesvirus 5 isolate FC structural glycopr... 40 5.6
34gb|AF390780.1| Human herpesvirus 5 isolate BRT structural glycop... 40 5.6
35gb|AF390765.1| Human herpesvirus 5 isolate LA38 structural glyco... 40 5.6
36gb|AF390762.1| Human herpesvirus 5 isolate LA28 structural glyco... 40 5.6
37gb|AF390761.1| Human herpesvirus 5 isolate LA25 structural glyco... 40 5.6
38gb|AF390756.1| Human herpesvirus 5 isolate LA2 structural glycop... 40 5.6
39gb|AF390754.1| Human herpesvirus 5 isolate LA16 structural glyco... 40 5.6
40gb|AF390752.1| Human herpesvirus 5 isolate LA14 structural glyco... 40 5.6
41gb|AF390751.1| Human herpesvirus 5 isolate LA12 structural glyco... 40 5.6
42gb|AF390750.1| Human herpesvirus 5 isolate LA10 structural glyco... 40 5.6
43gb|AF390749.1| Human herpesvirus 5 isolate FR structural glycopr... 40 5.6
44gb|AF390748.1| Human herpesvirus 5 isolate CER structural glycop... 40 5.6
45gb|AF396736.1| Human herpesvirus 5 isolate SN envelope glycoprot... 40 5.6
46gb|AF396733.1| Human herpesvirus 5 isolate RL envelope glycoprot... 40 5.6
47gb|AF390834.1| Human herpesvirus 5 isolate A40-5A envelope glyco... 40 5.6
48gb|AF390832.1| Human herpesvirus 5 isolate A39-19E* envelope gly... 40 5.6
49gb|AF390820.1| Human herpesvirus 5 isolate A33-70A envelope glyc... 40 5.6
50gb|AF390819.1| Human herpesvirus 5 isolate A32-96A envelope glyc... 40 5.6
51gb|AF390816.1| Human herpesvirus 5 isolate A28-99A envelope glyc... 40 5.6
52gb|AF390815.1| Human herpesvirus 5 isolate A27-38A envelope glyc... 40 5.6
53gb|AF390814.1| Human herpesvirus 5 isolate A26-41A envelope glyc... 40 5.6
54gb|AF390813.1| Human herpesvirus 5 isolate A25-17A envelope glyc... 40 5.6
55gb|AF390810.1| Human herpesvirus 5 isolate A22-19F envelope glyc... 40 5.6
56gb|AF390805.1| Human herpesvirus 5 isolate A12-35A envelope glyc... 40 5.6
57gb|AF390857.1| Human herpesvirus 5 isolate C33 envelope glycopro... 40 5.6
58gb|AF390850.1| Human herpesvirus 5 isolate C22 envelope glycopro... 40 5.6
59emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on ch... 40 5.6
60emb|CR450687.16| Zebrafish DNA sequence from clone CH211-204A13 ... 40 5.6
61gb|AC153898.4| Mus musculus 6 BAC RP23-55J19 (Roswell Park Cance... 40 5.6
62gb|AC122444.4| Mus musculus BAC clone RP24-232I9 from 9, complet... 40 5.6
63emb|AL929063.4| Mouse DNA sequence from clone RP23-291N19 on chr... 40 5.6
64gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome... 40 5.6
65gb|L40608.1|PFAVAR1A Plasmodium falciparum (strain Dd2) variant-... 40 5.6
66emb|AL671895.9| Mouse DNA sequence from clone RP23-342E4 on chro... 40 5.6
67gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, comp... 40 5.6
68dbj|AP001818.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 5.6 
>ref|XM_478915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2469

 Score =  383 bits (193), Expect = e-103
 Identities = 346/391 (88%), Gaps = 13/391 (3%)
 Strand = Plus / Minus

                                                                        
Query: 29   tatgacagaattccagcttatgttggaacaccttctaagtgtgtgccgcaatcaccactg 88
            |||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 2198 tatgacaggattccagcttatgttggaacac--tctaagtatgtgccgcaatcaccactg 2141

                                                                        
Query: 89   cacatctcattggaaaaccaaaagacctagtacacgtagaaaattaaactaaaatctgaa 148
            |||||||||||  ||||||||  |||||| |||| |||| || |||||||||||||||||
Sbjct: 2140 cacatctcattcaaaaaccaa--gacctaatacatgtaggaa-ttaaactaaaatctgaa 2084

                                                                        
Query: 149  accttcacaaaatgtttgtatcccgctcctctagcatgttggttggtgtccgtaaaccac 208
            |||||||||||| |||||||| | |||||||||||||| ||||    |||| ||||||||
Sbjct: 2083 accttcacaaaacgtttgtattc-gctcctctagcatggtggt----gtccataaaccac 2029

                                                                        
Query: 209  acctctggttagctagaaacaattaactaacctgtatattaatctgatatcaccaattca 268
            |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 2028 acctctggttagctagaaacaattaactaacccgtatattaacctgatatcaccaattca 1969

                                                                        
Query: 269  cagtactgcacctgaatacctgatatnatgggtgtcttgcctatcccaagtcatatatat 328
             |||  |||||||||||||||||||| |||  | | |   ||||||||||||  ||||||
Sbjct: 1968 tagtcatgcacctgaatacctgatataatgcttctttcatctatcccaagtc--atatat 1911

                                                                        
Query: 329  gactataataatattctcgcctnggaagggatacctctgnttgtctgattattattaaca 388
            || ||||||| || ||||| || ||||| |||||||||| ||||||||||||||||||||
Sbjct: 1910 gaatataatagtactctcg-ctaggaagtgatacctctgcttgtctgattattattaaca 1852

                                           
Query: 389  gtatagttgcccatgtaacttgntggcatgt 419
            |||||||||||||||||||||| ||| ||||
Sbjct: 1851 gtatagttgcccatgtaacttgctggtatgt 1821
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>dbj|AK121109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072P12, full
            insert sequence
          Length = 1972

 Score =  383 bits (193), Expect = e-103
 Identities = 346/391 (88%), Gaps = 13/391 (3%)
 Strand = Plus / Minus

                                                                        
Query: 29   tatgacagaattccagcttatgttggaacaccttctaagtgtgtgccgcaatcaccactg 88
            |||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 1777 tatgacaggattccagcttatgttggaacac--tctaagtatgtgccgcaatcaccactg 1720

                                                                        
Query: 89   cacatctcattggaaaaccaaaagacctagtacacgtagaaaattaaactaaaatctgaa 148
            |||||||||||  ||||||||  |||||| |||| |||| || |||||||||||||||||
Sbjct: 1719 cacatctcattcaaaaaccaa--gacctaatacatgtaggaa-ttaaactaaaatctgaa 1663

                                                                        
Query: 149  accttcacaaaatgtttgtatcccgctcctctagcatgttggttggtgtccgtaaaccac 208
            |||||||||||| |||||||| | |||||||||||||| ||||    |||| ||||||||
Sbjct: 1662 accttcacaaaacgtttgtattc-gctcctctagcatggtggt----gtccataaaccac 1608

                                                                        
Query: 209  acctctggttagctagaaacaattaactaacctgtatattaatctgatatcaccaattca 268
            |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 1607 acctctggttagctagaaacaattaactaacccgtatattaacctgatatcaccaattca 1548

                                                                        
Query: 269  cagtactgcacctgaatacctgatatnatgggtgtcttgcctatcccaagtcatatatat 328
             |||  |||||||||||||||||||| |||  | | |   ||||||||||||  ||||||
Sbjct: 1547 tagtcatgcacctgaatacctgatataatgcttctttcatctatcccaagtc--atatat 1490

                                                                        
Query: 329  gactataataatattctcgcctnggaagggatacctctgnttgtctgattattattaaca 388
            || ||||||| || ||||| || ||||| |||||||||| ||||||||||||||||||||
Sbjct: 1489 gaatataatagtactctcg-ctaggaagtgatacctctgcttgtctgattattattaaca 1431

                                           
Query: 389  gtatagttgcccatgtaacttgntggcatgt 419
            |||||||||||||||||||||| ||| ||||
Sbjct: 1430 gtatagttgcccatgtaacttgctggtatgt 1400
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>dbj|AK067725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G21, full
            insert sequence
          Length = 2469

 Score =  383 bits (193), Expect = e-103
 Identities = 346/391 (88%), Gaps = 13/391 (3%)
 Strand = Plus / Minus

                                                                        
Query: 29   tatgacagaattccagcttatgttggaacaccttctaagtgtgtgccgcaatcaccactg 88
            |||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 2198 tatgacaggattccagcttatgttggaacac--tctaagtatgtgccgcaatcaccactg 2141

                                                                        
Query: 89   cacatctcattggaaaaccaaaagacctagtacacgtagaaaattaaactaaaatctgaa 148
            |||||||||||  ||||||||  |||||| |||| |||| || |||||||||||||||||
Sbjct: 2140 cacatctcattcaaaaaccaa--gacctaatacatgtaggaa-ttaaactaaaatctgaa 2084

                                                                        
Query: 149  accttcacaaaatgtttgtatcccgctcctctagcatgttggttggtgtccgtaaaccac 208
            |||||||||||| |||||||| | |||||||||||||| ||||    |||| ||||||||
Sbjct: 2083 accttcacaaaacgtttgtattc-gctcctctagcatggtggt----gtccataaaccac 2029

                                                                        
Query: 209  acctctggttagctagaaacaattaactaacctgtatattaatctgatatcaccaattca 268
            |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 2028 acctctggttagctagaaacaattaactaacccgtatattaacctgatatcaccaattca 1969

                                                                        
Query: 269  cagtactgcacctgaatacctgatatnatgggtgtcttgcctatcccaagtcatatatat 328
             |||  |||||||||||||||||||| |||  | | |   ||||||||||||  ||||||
Sbjct: 1968 tagtcatgcacctgaatacctgatataatgcttctttcatctatcccaagtc--atatat 1911

                                                                        
Query: 329  gactataataatattctcgcctnggaagggatacctctgnttgtctgattattattaaca 388
            || ||||||| || ||||| || ||||| |||||||||| ||||||||||||||||||||
Sbjct: 1910 gaatataatagtactctcg-ctaggaagtgatacctctgcttgtctgattattattaaca 1852

                                           
Query: 389  gtatagttgcccatgtaacttgntggcatgt 419
            |||||||||||||||||||||| ||| ||||
Sbjct: 1851 gtatagttgcccatgtaacttgctggtatgt 1821
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  293 bits (148), Expect = 2e-76
 Identities = 243/270 (90%), Gaps = 10/270 (3%)
 Strand = Plus / Minus

                                                                            
Query: 29       tatgacagaattccagcttatgttggaacaccttctaagtgtgtgccgcaatcaccactg 88
                |||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 23655078 tatgacaggattccagcttatgttggaacac--tctaagtatgtgccgcaatcaccactg 23655021

                                                                            
Query: 89       cacatctcattggaaaaccaaaagacctagtacacgtagaaaattaaactaaaatctgaa 148
                |||||||||||  ||||||||  |||||| |||| |||| || |||||||||||||||||
Sbjct: 23655020 cacatctcattcaaaaaccaa--gacctaatacatgtaggaa-ttaaactaaaatctgaa 23654964

                                                                            
Query: 149      accttcacaaaatgtttgtatcccgctcctctagcatgttggttggtgtccgtaaaccac 208
                |||||||||||| |||||||| | |||||||||||||| ||||    |||| ||||||||
Sbjct: 23654963 accttcacaaaacgtttgtattc-gctcctctagcatggtggt----gtccataaaccac 23654909

                                                                            
Query: 209      acctctggttagctagaaacaattaactaacctgtatattaatctgatatcaccaattca 268
                |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 23654908 acctctggttagctagaaacaattaactaacccgtatattaacctgatatcaccaattca 23654849

                                              
Query: 269      cagtactgcacctgaatacctgatatnatg 298
                 |||  |||||||||||||||||||| |||
Sbjct: 23654848 tagtcatgcacctgaatacctgatataatg 23654819



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 361      acctctgnttgtctgattattattaacagtatagttgcccatgtaacttgntggcatgt 419
                ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 23652948 acctctgcttgtctgattattattaacagtatagttgcccatgtaacttgctggtatgt 23652890
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>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1127_E01
          Length = 123787

 Score =  293 bits (148), Expect = 2e-76
 Identities = 243/270 (90%), Gaps = 10/270 (3%)
 Strand = Plus / Minus

                                                                          
Query: 29     tatgacagaattccagcttatgttggaacaccttctaagtgtgtgccgcaatcaccactg 88
              |||||||| ||||||||||||||||||||||  ||||||| |||||||||||||||||||
Sbjct: 107519 tatgacaggattccagcttatgttggaacac--tctaagtatgtgccgcaatcaccactg 107462

                                                                          
Query: 89     cacatctcattggaaaaccaaaagacctagtacacgtagaaaattaaactaaaatctgaa 148
              |||||||||||  ||||||||  |||||| |||| |||| || |||||||||||||||||
Sbjct: 107461 cacatctcattcaaaaaccaa--gacctaatacatgtaggaa-ttaaactaaaatctgaa 107405

                                                                          
Query: 149    accttcacaaaatgtttgtatcccgctcctctagcatgttggttggtgtccgtaaaccac 208
              |||||||||||| |||||||| | |||||||||||||| ||||    |||| ||||||||
Sbjct: 107404 accttcacaaaacgtttgtattc-gctcctctagcatggtggt----gtccataaaccac 107350

                                                                          
Query: 209    acctctggttagctagaaacaattaactaacctgtatattaatctgatatcaccaattca 268
              |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 107349 acctctggttagctagaaacaattaactaacccgtatattaacctgatatcaccaattca 107290

                                            
Query: 269    cagtactgcacctgaatacctgatatnatg 298
               |||  |||||||||||||||||||| |||
Sbjct: 107289 tagtcatgcacctgaatacctgatataatg 107260



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                         
Query: 361    acctctgnttgtctgattattattaacagtatagttgcccatgtaacttgntggcatgt 419
              ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 105389 acctctgcttgtctgattattattaacagtatagttgcccatgtaacttgctggtatgt 105331
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>gb|BT016400.1| Zea mays clone Contig233 mRNA sequence
          Length = 913

 Score =  289 bits (146), Expect = 4e-75
 Identities = 347/405 (85%), Gaps = 19/405 (4%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggtntacaagtttgtcgtgtcgtatgacagaattccagcttatgttggaacaccttcta 65
           |||| ||||||||| || |  |||||||||||||||||||||||||||||||| ||||||
Sbjct: 174 tggtatacaagtttatccttccgtatgacagaattccagcttatgttggaaca-cttcta 232

                                                                       
Query: 66  agtgtgtgccgcaatcaccactgcacatctcattggaaaaccaaaagacctagtacacgt 125
           ||| ||||||||||||| ||||||||||||||||  |||| |  ||| |||| || | ||
Sbjct: 233 agtttgtgccgcaatcaacactgcacatctcatttaaaaaac-gaaggcctaatagatgt 291

                                                                       
Query: 126 agaaaattaaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcat 185
           || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 292 ag-aaattaaactaaaatctgaaagcttcacaaaatgtttgtat-ccgctcctctagcat 349

                                                                       
Query: 186 gttggttggtgtccgtaaaccacacctctgg-----ttagctagaaacaattaactaacc 240
            |   |||||||  |||||||||||||||||     ||| ||||||||||  ||||||||
Sbjct: 350 tt---ttggtgt-tgtaaaccacacctctggttaccttaactagaaacaagcaactaacc 405

                                                                       
Query: 241 tgtatattaatctgatatcaccaattcacagtactgcacctgaatacctgata---tnat 297
           ||||||||||||||| ||||||||||||||||  ||||||||||  |||||||   |  |
Sbjct: 406 tgtatattaatctgacatcaccaattcacagtcatgcacctgaaagcctgatatagtagt 465

                                                                       
Query: 298 gggtgtcttgcctatcccaagtcatatatatgactataataatattctcgcctnggaagg 357
           |||| | |  |||||||||||||  || ||||| |||||||||| |||  ||| ||||| 
Sbjct: 466 gggtatttcacctatcccaagtc--atgtatgaatataataatactct-tcctaggaagt 522

                                                        
Query: 358 gatacctctgnttgtctgattattattaacagtatagttgcccat 402
           |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 523 gatacctctgcttgtctgattattattaacagtatagttgcccat 567
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>gb|AY106359.1| Zea mays PCO114626 mRNA sequence
          Length = 1099

 Score =  276 bits (139), Expect = 5e-71
 Identities = 347/406 (85%), Gaps = 20/406 (4%)
 Strand = Plus / Minus

                                                                       
Query: 6   tggtntacaagtttgtcgtgtcgtatgacagaattccagcttatgttggaacaccttcta 65
           |||| ||||||||| || |  |||||||||||||||||||||||||||||||| ||||||
Sbjct: 944 tggtatacaagtttatccttccgtatgacagaattccagcttatgttggaaca-cttcta 886

                                                                       
Query: 66  agtgtgtgccgcaatc-accactgcacatctcattggaaaaccaaaagacctagtacacg 124
           ||| |||||||||||| | ||||||||||||||||  |||| |  ||| |||| || | |
Sbjct: 885 agtttgtgccgcaatcaaacactgcacatctcatttaaaaaac-gaaggcctaatagatg 827

                                                                       
Query: 125 tagaaaattaaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagca 184
           ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 826 tag-aaattaaactaaaatctgaaagcttcacaaaatgtttgtat-ccgctcctctagca 769

                                                                       
Query: 185 tgttggttggtgtccgtaaaccacacctctgg-----ttagctagaaacaattaactaac 239
           | |   |||||||  |||||||||||||||||     ||| ||||||||||  |||||||
Sbjct: 768 ttt---ttggtgt-tgtaaaccacacctctggttaccttaactagaaacaagcaactaac 713

                                                                       
Query: 240 ctgtatattaatctgatatcaccaattcacagtactgcacctgaatacctgata---tna 296
           |||||||||||||||| ||||||||||||||||  ||||||||||  |||||||   |  
Sbjct: 712 ctgtatattaatctgacatcaccaattcacagtcatgcacctgaaagcctgatatagtag 653

                                                                       
Query: 297 tgggtgtcttgcctatcccaagtcatatatatgactataataatattctcgcctnggaag 356
           ||||| | |  |||||||||||||  || ||||| |||||||||| |||  ||| |||||
Sbjct: 652 tgggtatttcacctatcccaagtc--atgtatgaatataataatactct-tcctaggaag 596

                                                         
Query: 357 ggatacctctgnttgtctgattattattaacagtatagttgcccat 402
            |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 595 tgatacctctgcttgtctgattattattaacagtatagttgcccat 550
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>gb|BT018748.1| Zea mays clone EL01N0522F03.d mRNA sequence
          Length = 1884

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 233  aactaacctgtatattaatctga 255
            |||||||||||||||||||||||
Sbjct: 1557 aactaacctgtatattaatctga 1535
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>gb|AY107935.1| Zea mays PCO066270 mRNA sequence
          Length = 589

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 78  aatcaccactgcacatctcattggaaaaccaaaag 112
           |||||||||| |||||||||||  |||||||||||
Sbjct: 425 aatcaccactacacatctcattcaaaaaccaaaag 391
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>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence
          Length = 125129

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 321   atatatatgactataataatat 342
             ||||||||||||||||||||||
Sbjct: 19656 atatatatgactataataatat 19677
to top
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence
          Length = 110437

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 321  atatatatgactataataatat 342
            ||||||||||||||||||||||
Sbjct: 6609 atatatatgactataataatat 6588
to top
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence
          Length = 129197

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 321   atatatatgactataataatat 342
             ||||||||||||||||||||||
Sbjct: 16868 atatatatgactataataatat 16847
to top
>emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, complete sequence
          Length = 165531

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 92     atctcattggaaaaccaaaagacct 116
              |||||||||||||| ||||||||||
Sbjct: 127718 atctcattggaaaaacaaaagacct 127694
to top
>gb|AC087385.5| Homo sapiens chromosome 15, clone RP11-745A24, complete sequence
          Length = 190890

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    agaaaattaaactaaaatctg 146
              |||||||||||||||||||||
Sbjct: 139067 agaaaattaaactaaaatctg 139087
to top
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 100     ggaaaaccaaaagacctagta 120
               |||||||||||||||||||||
Sbjct: 2161785 ggaaaaccaaaagacctagta 2161765
to top
>gb|AC170813.3| Rhesus Macaque  BAC CH250-421G6 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 165221

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 302   gtcttgcctatcccaagtcat 322
             |||||||||||||||||||||
Sbjct: 44996 gtcttgcctatcccaagtcat 44976
to top
>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence
          Length = 180370

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   ccaattcacagtactgcacc 280
             ||||||||||||||||||||
Sbjct: 50291 ccaattcacagtactgcacc 50272
to top
>gb|AY486475.1|AY486470S06 Human herpesvirus 5 strain Toledo genome, partial sequence
          Length = 16210

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  aaaaccaaaagacctagtac 121
            ||||||||||||||||||||
Sbjct: 7743 aaaaccaaaagacctagtac 7724
to top
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aaaaccaaaagacctagtac 121
              ||||||||||||||||||||
Sbjct: 121122 aaaaccaaaagacctagtac 121141
to top
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence
          Length = 226889

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aaaaccaaaagacctagtac 121
              ||||||||||||||||||||
Sbjct: 116563 aaaaccaaaagacctagtac 116582
to top
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    aaaaccaaaagacctagtac 121
              ||||||||||||||||||||
Sbjct: 140307 aaaaccaaaagacctagtac 140288
to top
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    aaaaccaaaagacctagtac 121
              ||||||||||||||||||||
Sbjct: 105280 aaaaccaaaagacctagtac 105261
to top
>gb|AC156281.4| Mus musculus 6 BAC RP24-311B6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 197360

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    aaaatctgaaaccttcacaa 158
              ||||||||||||||||||||
Sbjct: 117415 aaaatctgaaaccttcacaa 117396
to top
>gb|AF309999.1| Human herpesvirus 5 isolate CR structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309998.1| Human herpesvirus 5 isolate LV structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309997.1| Human herpesvirus 5 isolate BR structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309996.1| Human herpesvirus 5 isolate SE structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309995.1| Human herpesvirus 5 isolate RL structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309993.1| Human herpesvirus 5 isolate HDu structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, complete sequence
          Length = 150013

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   tcatatatatgactataata 338
             ||||||||||||||||||||
Sbjct: 73059 tcatatatatgactataata 73078
to top
>gb|AF390790.1| Human herpesvirus 5 isolate VT structural glycoprotein gpUL73 gene,
           complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390785.1| Human herpesvirus 5 isolate MD structural glycoprotein gpUL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390782.1| Human herpesvirus 5 isolate FC structural glycoprotein gpUL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390780.1| Human herpesvirus 5 isolate BRT structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390765.1| Human herpesvirus 5 isolate LA38 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390762.1| Human herpesvirus 5 isolate LA28 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390761.1| Human herpesvirus 5 isolate LA25 structural glycoprotein gpUL73
           gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390756.1| Human herpesvirus 5 isolate LA2 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390754.1| Human herpesvirus 5 isolate LA16 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390752.1| Human herpesvirus 5 isolate LA14 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390751.1| Human herpesvirus 5 isolate LA12 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390750.1| Human herpesvirus 5 isolate LA10 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390749.1| Human herpesvirus 5 isolate FR structural glycoprotein gpUL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390748.1| Human herpesvirus 5 isolate CER structural glycoprotein gpUL73
           gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF396736.1| Human herpesvirus 5 isolate SN envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF396733.1| Human herpesvirus 5 isolate RL envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390834.1| Human herpesvirus 5 isolate A40-5A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390832.1| Human herpesvirus 5 isolate A39-19E* envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390820.1| Human herpesvirus 5 isolate A33-70A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390819.1| Human herpesvirus 5 isolate A32-96A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390816.1| Human herpesvirus 5 isolate A28-99A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390815.1| Human herpesvirus 5 isolate A27-38A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390814.1| Human herpesvirus 5 isolate A26-41A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390813.1| Human herpesvirus 5 isolate A25-17A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390810.1| Human herpesvirus 5 isolate A22-19F envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390805.1| Human herpesvirus 5 isolate A12-35A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390857.1| Human herpesvirus 5 isolate C33 envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390850.1| Human herpesvirus 5 isolate C22 envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 aaaaccaaaagacctagtac 121
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on chromosome 2, complete
             sequence
          Length = 161244

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   atatatgactataataatat 342
             ||||||||||||||||||||
Sbjct: 37429 atatatgactataataatat 37410
to top
>emb|CR450687.16| Zebrafish DNA sequence from clone CH211-204A13 in linkage group 19,
             complete sequence
          Length = 143150

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 225   aaacaattaactaacctgtatatt 248
             |||||||||||| |||||||||||
Sbjct: 63050 aaacaattaacttacctgtatatt 63073
to top
>gb|AC153898.4| Mus musculus 6 BAC RP23-55J19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 234760

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    aaaatctgaaaccttcacaa 158
              ||||||||||||||||||||
Sbjct: 225972 aaaatctgaaaccttcacaa 225991
to top
>gb|AC122444.4| Mus musculus BAC clone RP24-232I9 from 9, complete sequence
          Length = 184253

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   tcaccactgcacatctcattggaa 103
            |||||||||| |||||||||||||
Sbjct: 1324 tcaccactgcccatctcattggaa 1301
to top
>emb|AL929063.4| Mouse DNA sequence from clone RP23-291N19 on chromosome 2, complete
             sequence
          Length = 120516

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 297   tgggtgtcttgcctatcccaagtc 320
             |||||| |||||||||||||||||
Sbjct: 27797 tgggtgccttgcctatcccaagtc 27774
to top
>gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome 9, complete sequence
          Length = 254666

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 80     tcaccactgcacatctcattggaa 103
              |||||||||| |||||||||||||
Sbjct: 197421 tcaccactgcccatctcattggaa 197398
to top
>gb|L40608.1|PFAVAR1A Plasmodium falciparum (strain Dd2) variant-specific surface protein
            (var-1) gene, complete cds
          Length = 19124

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  tatatgactataataatatt 343
            ||||||||||||||||||||
Sbjct: 2092 tatatgactataataatatt 2111
to top
>emb|AL671895.9| Mouse DNA sequence from clone RP23-342E4 on chromosome 4, complete
             sequence
          Length = 200368

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    acaccttctaagtgtgtgcc 75
             ||||||||||||||||||||
Sbjct: 60302 acaccttctaagtgtgtgcc 60283
to top
>gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, complete sequence
          Length = 217346

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  aaaattaaactaaaatctga 147
            ||||||||||||||||||||
Sbjct: 4328 aaaattaaactaaaatctga 4347
to top
>dbj|AP001818.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2222M9, complete
             sequence
          Length = 116321

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   tcatatatatgactataata 338
             ||||||||||||||||||||
Sbjct: 54916 tcatatatatgactataata 54935


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,949,777
Number of Sequences: 3902068
Number of extensions: 3949777
Number of successful extensions: 69994
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69816
Number of HSP's gapped (non-prelim): 146
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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