ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62f18 |
|---|---|
| Clone Library Name | barley_pub |
>DHSA_ARATH (O82663) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 634 Score = 216 bits (551), Expect = 3e-56 Identities = 106/152 (69%), Positives = 118/152 (77%) Frame = -2 Query: 558 IAWLXXXXNANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKIS 379 IAWL N+NGSL IRLN QRIMQN AVFRTQETLEEGC LI KAWES+ V++ Sbjct: 483 IAWLDRLRNSNGSLPTSTIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFGDVQVK 542 Query: 378 DRSLIWNSDXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGY 199 DRS+IWNSD NA ITM+SAEARKESRGAHAREDFT R+D WMKH+LGY Sbjct: 543 DRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGY 602 Query: 198 WENEKVRLAYRPVHXNTLDDEIESFPPKARVY 103 WE+EKVRL YRPVH +TLDDEI++FPPKARVY Sbjct: 603 WEDEKVRLDYRPVHMDTLDDEIDTFPPKARVY 634
>DHSA_RICCN (Q92J97) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 596 Score = 141 bits (355), Expect = 1e-33 Identities = 73/145 (50%), Positives = 94/145 (64%), Gaps = 1/145 (0%) Frame = -2 Query: 534 NANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNS 355 +ANG++ ++RL QR MQ+ +VFRTQE L+EG +IS+ Y +KI+D+SLIWNS Sbjct: 452 HANGNILVAELRLKMQRTMQSHASVFRTQEVLDEGAGMISEIRSGYKDIKINDKSLIWNS 511 Query: 354 DXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSL-GYWENEKVR 178 D A +T+YSA ARKESRGAHARED+ R+DE WMKH+L E KV Sbjct: 512 DLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDEDWMKHTLSSIDEAGKVV 571 Query: 177 LAYRPVHXNTLDDEIESFPPKARVY 103 L Y+PV TL DE+ + PP RVY Sbjct: 572 LDYKPVTLTTLTDEVTAVPPVKRVY 596
>DHSA_RICPR (P31038) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 596 Score = 129 bits (325), Expect = 4e-30 Identities = 68/144 (47%), Positives = 90/144 (62%), Gaps = 1/144 (0%) Frame = -2 Query: 531 ANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSD 352 ANG++ +RL QR MQ+ +VFRTQ+ L+EG +IS+ Y +KI+D+SLIWNSD Sbjct: 453 ANGNILVADLRLKMQRTMQSHVSVFRTQKLLDEGVGMISEIRNRYKDIKINDKSLIWNSD 512 Query: 351 XXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENE-KVRL 175 A +T+ SA ARKESRGAHARED+ R+D W+KH+L ++ KV L Sbjct: 513 LVEALELDNLLDQALVTVCSAAARKESRGAHAREDYPDRNDRDWIKHTLSSIDDSGKVVL 572 Query: 174 AYRPVHXNTLDDEIESFPPKARVY 103 Y+PV TL D I + PP RVY Sbjct: 573 DYKPVTLTTLTDAISAIPPVKRVY 596
>DHSA_YEAST (Q00711) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 640 Score = 127 bits (319), Expect = 2e-29 Identities = 73/156 (46%), Positives = 92/156 (58%), Gaps = 4/156 (2%) Frame = -2 Query: 558 IAWLXXXXNANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKIS 379 IA L NANGS +IR+N ++ MQ +VFRTQ +L+EG I+ +++ VK + Sbjct: 486 IANLDKLRNANGSRSTAEIRMNMKQTMQKDVSVFRTQSSLDEGVRNITAVEKTFDDVKTT 545 Query: 378 DRSLIWNSDXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGY 199 DRS+IWNSD A T SA RKESRGAHARED+ RDDEHWMKH+L Sbjct: 546 DRSMIWNSDLVETLELQNLLTCASQTAVSAANRKESRGAHAREDYPNRDDEHWMKHTLS- 604 Query: 198 WENE---KVRLAYRPVHXNTLDD-EIESFPPKARVY 103 W+ + V L YR V +TLD+ E S PP R Y Sbjct: 605 WQKDVAAPVTLKYRRVIDHTLDEKECPSVPPTVRAY 640
>DHSA_PARDE (Q59661) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 600 Score = 127 bits (318), Expect = 3e-29 Identities = 72/150 (48%), Positives = 88/150 (58%), Gaps = 6/150 (4%) Frame = -2 Query: 534 NANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNS 355 NA+GS+ +RL QR MQ AVFRT +TL EG + +K++DRSLIWNS Sbjct: 451 NADGSVSTADLRLEMQRTMQADAAVFRTDKTLAEGVDKMRVIAGKLSDLKVTDRSLIWNS 510 Query: 354 DXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENEKVRL 175 D NA T+ +AEARKESRGAHA ED+ RDD +W KHSL + E V+L Sbjct: 511 DLMETLELTNLMPNALATIVAAEARKESRGAHAHEDYPERDDANWRKHSLAWIEGNDVKL 570 Query: 174 AYRPVHXN--TLDDE----IESFPPKARVY 103 AYRPVH T DE ++ PKARVY Sbjct: 571 AYRPVHLEPLTRQDEGGIDLKKIAPKARVY 600
>DHSX_YEAST (P47052) Probable succinate dehydrogenase [ubiquinone] flavoprotein| subunit 2, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 634 Score = 124 bits (310), Expect = 2e-28 Identities = 70/155 (45%), Positives = 92/155 (59%), Gaps = 3/155 (1%) Frame = -2 Query: 558 IAWLXXXXNANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKIS 379 IA L NA GSL +IRLN QR MQ +VFRTQ+TL+EG I++ +++ V +S Sbjct: 480 IANLDKVRNARGSLKTSQIRLNMQRTMQKDVSVFRTQDTLDEGVRNITEVDKTFEDVHVS 539 Query: 378 DRSLIWNSDXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGY 199 D+S+IWNSD A T SA RKESRGAHARED+ RDD +W KH+L + Sbjct: 540 DKSMIWNSDLVETLELQNLLTCATQTAVSASKRKESRGAHAREDYAKRDDVNWRKHTLSW 599 Query: 198 WE--NEKVRLAYRPVHXNTLDD-EIESFPPKARVY 103 + + V++ YR V +TLD+ E PP R Y Sbjct: 600 QKGTSTPVKIKYRNVIAHTLDENECAPVPPAVRSY 634
>DHSA_DROME (Q94523) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 661 Score = 117 bits (292), Expect = 3e-26 Identities = 67/171 (39%), Positives = 92/171 (53%), Gaps = 19/171 (11%) Frame = -2 Query: 558 IAWLXXXXNANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKIS 379 +A L +ANG + +RL Q+ MQ+ AVFR L++G + + ++ + +K+ Sbjct: 491 VANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVV 550 Query: 378 DRSLIWNSDXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDE--------- 226 DRSLIWNSD NA +T+ SAEARKESRGAHAREDF R+DE Sbjct: 551 DRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVREDEYDFSKPLDG 610 Query: 225 --------HWMKHSLGYW--ENEKVRLAYRPVHXNTLDDEIESFPPKARVY 103 HW KH+L + +N + L YR V TLD+E+ + PP R Y Sbjct: 611 QQKKPMDQHWRKHTLSWVCNDNGDITLDYRNVIDTTLDNEVSTVPPAIRSY 661
>DHSA_MOUSE (Q8K2B3) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (Fp) (Flavoprotein subunit of complex II) Length = 664 Score = 113 bits (282), Expect = 4e-25 Identities = 66/163 (40%), Positives = 86/163 (52%), Gaps = 20/163 (12%) Frame = -2 Query: 531 ANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSD 352 A+GS+ ++RLN Q+ MQN AVFR L+EGC IS+ + +K DR ++WN+D Sbjct: 502 ADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTD 561 Query: 351 XXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDD-----------------EH 223 A T+Y AEARKESRGAHARED+ R D EH Sbjct: 562 LVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRVDEYDYSKPIQGQQKKPFGEH 621 Query: 222 WMKHSLGYWE--NEKVRLAYRPVHXNTLDD-EIESFPPKARVY 103 W KH+L Y + KV L YRPV TL++ + + PP R Y Sbjct: 622 WRKHTLSYVDIKTGKVTLEYRPVIDKTLNEADCATVPPAIRSY 664
>DHSA_MACFA (Q8HXW3) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (Fp) (Flavoprotein subunit of complex II) Length = 664 Score = 112 bits (281), Expect = 5e-25 Identities = 66/163 (40%), Positives = 86/163 (52%), Gaps = 20/163 (12%) Frame = -2 Query: 531 ANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSD 352 A+GS+ ++RL+ Q+ MQN AVFR L+EGC ISK + +K DR ++WN+D Sbjct: 502 ADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTD 561 Query: 351 XXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDD-----------------EH 223 A T+Y AEARKESRGAHARED+ R D EH Sbjct: 562 LVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKARIDEYDYSKPIQGQQKKPFEEH 621 Query: 222 WMKHSLGYWE--NEKVRLAYRPVHXNTLDD-EIESFPPKARVY 103 W KH+L Y + KV L YRPV TL++ + + PP R Y Sbjct: 622 WRKHTLSYVDVSTGKVTLEYRPVIDKTLNEADCATVPPAIRSY 664
>DHSA_HUMAN (P31040) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (Fp) (Flavoprotein subunit of complex II) Length = 664 Score = 112 bits (281), Expect = 5e-25 Identities = 66/163 (40%), Positives = 86/163 (52%), Gaps = 20/163 (12%) Frame = -2 Query: 531 ANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSD 352 A+GS+ ++RL+ Q+ MQN AVFR L+EGC ISK + +K DR ++WN+D Sbjct: 502 ADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTD 561 Query: 351 XXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDD-----------------EH 223 A T+Y AEARKESRGAHARED+ R D EH Sbjct: 562 LVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIQGQQKKPFEEH 621 Query: 222 WMKHSLGYWE--NEKVRLAYRPVHXNTLDD-EIESFPPKARVY 103 W KH+L Y + KV L YRPV TL++ + + PP R Y Sbjct: 622 WRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPAIRSY 664
>DHSA_RAT (Q920L2) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (Fp) (Flavoprotein subunit of complex II) Length = 656 Score = 109 bits (273), Expect = 5e-24 Identities = 63/163 (38%), Positives = 87/163 (53%), Gaps = 20/163 (12%) Frame = -2 Query: 531 ANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSD 352 A+GS+ ++RL+ Q+ MQ+ AVFR L+EGC +S+ + +K DR ++WN+D Sbjct: 494 ADGSVRTSELRLSMQKSMQSHAAVFRVGSVLQEGCEKVSQLYGDLQHLKTFDRGMVWNTD 553 Query: 351 XXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDD-----------------EH 223 A T+Y AEARKESRGAHARED+ R D EH Sbjct: 554 LVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIEGQQKKPFAEH 613 Query: 222 WMKHSLGYWENE--KVRLAYRPVHXNTLDD-EIESFPPKARVY 103 W KH+L Y + + KV L YRPV TL++ + + PP R Y Sbjct: 614 WRKHTLSYVDTKTGKVTLDYRPVIDKTLNEADCATVPPAIRSY 656
>DHSA_SCHPO (Q9UTJ7) Probable succinate dehydrogenase [ubiquinone] flavoprotein| subunit, mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 641 Score = 108 bits (269), Expect = 1e-23 Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 4/156 (2%) Frame = -2 Query: 558 IAWLXXXXNANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKIS 379 + +L + G +IRL+ Q+ MQ +VFR +ETL+EG I++ +Y + I Sbjct: 487 LKFLDQIRTSQGPKHTSEIRLDMQKTMQRDVSVFRMEETLQEGVKNIARVDGTYKDIGIR 546 Query: 378 DRSLIWNSDXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGY 199 DR LIWN+D A T +A RKESRGAHARED+ RDD++W+KH+L Sbjct: 547 DRGLIWNTDLVEALELRNLLTCAVQTANAALNRKESRGAHAREDYPERDDKNWIKHTL-T 605 Query: 198 WEN---EKVRLAYRPVHXNTLDD-EIESFPPKARVY 103 W++ + V L YR V T+D+ E++ PP RVY Sbjct: 606 WQHKTGDPVTLKYRAVTRTTMDENEVKPVPPFKRVY 641
>DHSA_BOVIN (P31039) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (Fp) (Flavoprotein subunit of complex II) Length = 665 Score = 103 bits (258), Expect = 2e-22 Identities = 63/163 (38%), Positives = 81/163 (49%), Gaps = 20/163 (12%) Frame = -2 Query: 531 ANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSD 352 ANGS+ ++RLN Q+ MQ+ AVFR L+EGC IS + +K DR ++WN+D Sbjct: 503 ANGSIRTSELRLNMQKSMQSHAAVFRVGSVLQEGCEKISSLYGDLRHLKTFDRGMVWNTD 562 Query: 351 XXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDE-----------------H 223 A T+Y AEARKESRG REDF R DE H Sbjct: 563 LVETLELQNLMLCALQTIYGAEARKESRGGPRREDFKERVDEYDYSKPIQGQQKKPFEQH 622 Query: 222 WMKHSLGYWE--NEKVRLAYRPVHXNTLDD-EIESFPPKARVY 103 W KH+L Y + KV L YRPV TL++ + + PP Y Sbjct: 623 WRKHTLSYVDIKTGKVTLEYRPVIDRTLNETDCATVPPAIGSY 665
>DHSA_CAEEL (Q09508) Succinate dehydrogenase [ubiquinone] flavoprotein subunit,| mitochondrial precursor (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) Length = 646 Score = 101 bits (252), Expect = 1e-21 Identities = 62/161 (38%), Positives = 84/161 (52%), Gaps = 20/161 (12%) Frame = -2 Query: 525 GSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXX 346 G + ++RL Q+ MQN AVFR + L+EG ++SK ++ + ++D+ L+WNSD Sbjct: 486 GDISTAELRLTMQKSMQNHAAVFRRGDILKEGVKVLSKLYKDQAHLNVADKGLVWNSDLI 545 Query: 345 XXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDE-----------------HWM 217 NA T+ +AE R+ESRGAHAR+DF R DE HW Sbjct: 546 ETLELQNLLINATQTIVAAENREESRGAHARDDFPDRLDELDYSKPLEGQTKKELKDHWR 605 Query: 216 KHSL--GYWENEKVRLAYRPVHXNTLD-DEIESFPPKARVY 103 KHS+ E +V L YRPV TLD E + PPK R Y Sbjct: 606 KHSIIRSNIETGEVSLDYRPVIDTTLDKSETDWVPPKVRSY 646
>FRDA_HAEIN (P44894) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 599 Score = 76.3 bits (186), Expect = 6e-14 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 1/153 (0%) Frame = -2 Query: 558 IAWLXXXXNANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKIS 379 +A L G+ +IR +M+ ++R Q ++++ I++ E Y +++S Sbjct: 435 VARLEALHKQEGNESWSEIRDEMGTVMEEGCGIYRDQASMQKAVDKIAELKERYKRIRVS 494 Query: 378 DRSLIWNSDXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGY 199 D S ++N+D A SA RKESRGAH R D+T RDD +++KH+L + Sbjct: 495 DNSSVFNTDVLYTVELGYILDVAQSIANSAIERKESRGAHQRLDYTERDDVNYLKHTLAF 554 Query: 198 W-ENEKVRLAYRPVHXNTLDDEIESFPPKARVY 103 + EN R+ Y PV +I P RVY Sbjct: 555 YNENGAPRIEYSPV-------KITKSQPAKRVY 580
>DHSA_COXBU (P51054) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 587 Score = 73.9 bits (180), Expect = 3e-13 Identities = 41/132 (31%), Positives = 68/132 (51%) Frame = -2 Query: 504 IRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXXX 325 +R ++ M VFR ++ +++G + K E K++D S +N+ Sbjct: 460 LRQEMRKAMSEDFGVFREEQKMKQGLERLQKLNERLQRAKLTDTSRTFNNARIEALELDN 519 Query: 324 XXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENEKVRLAYRPVHXNTL 145 + T SA+ R ESRGAH+R D+ RDD +W+KH++ + + +AYRPV N Sbjct: 520 LMEVSYATAVSAQQRTESRGAHSRYDYKERDDANWLKHTVYFRDG---HIAYRPV--NMK 574 Query: 144 DDEIESFPPKAR 109 ++ FPPK+R Sbjct: 575 PKGMDPFPPKSR 586
>FRDA_ECOLI (P00363) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 601 Score = 69.7 bits (169), Expect = 5e-12 Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 3/147 (2%) Frame = -2 Query: 534 NANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNS 355 N +G KIR M+ ++RT E +++ +++ E + V+I+D S ++N+ Sbjct: 441 NQDGGENWAKIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNT 500 Query: 354 DXXXXXXXXXXXXNACITMYSAEARKESRGAHAR--EDFTTRDDEHWMKHSLGYWENE-K 184 D A +SA ARKESRGAH R E T RDD +++KH+L + + + Sbjct: 501 DLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGT 560 Query: 183 VRLAYRPVHXNTLDDEIESFPPKARVY 103 RL Y V TL PP RVY Sbjct: 561 TRLEYSDVKITTL-------PPAKRVY 580
>FRDA_MYCTU (P64174) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 583 Score = 67.0 bits (162), Expect = 3e-11 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 1/145 (0%) Frame = -2 Query: 534 NANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNS 355 + G IR + Q +++ ++R TL + I E + I D S +N+ Sbjct: 444 HGQGGERIADIRADMQATLESAAGIYRDGPTLTKAVEEIRVLQERFATAGIDDHSRTFNT 503 Query: 354 DXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENE-KVR 178 + A + S R+ESRGAH R DF RDDEH++ H+L + E++ +R Sbjct: 504 ELTALLELSGMLDVALAIVESGLRREESRGAHQRTDFPNRDDEHFLAHTLVHRESDGTLR 563 Query: 177 LAYRPVHXNTLDDEIESFPPKARVY 103 + Y PV I +PP RVY Sbjct: 564 VGYLPV-------TITRWPPGERVY 581
>FRDA_MYCBO (P64175) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 583 Score = 67.0 bits (162), Expect = 3e-11 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 1/145 (0%) Frame = -2 Query: 534 NANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNS 355 + G IR + Q +++ ++R TL + I E + I D S +N+ Sbjct: 444 HGQGGERIADIRADMQATLESAAGIYRDGPTLTKAVEEIRVLQERFATAGIDDHSRTFNT 503 Query: 354 DXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENE-KVR 178 + A + S R+ESRGAH R DF RDDEH++ H+L + E++ +R Sbjct: 504 ELTALLELSGMLDVALAIVESGLRREESRGAHQRTDFPNRDDEHFLAHTLVHRESDGTLR 563 Query: 177 LAYRPVHXNTLDDEIESFPPKARVY 103 + Y PV I +PP RVY Sbjct: 564 VGYLPV-------TITRWPPGERVY 581
>DHSA_ECOLI (P0AC41) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 66.2 bits (160), Expect = 6e-11 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 1/135 (0%) Frame = -2 Query: 504 IRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXXX 325 IR Q MQ+ +VFR + + +G + E ++ D S +N+ Sbjct: 459 IRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDN 518 Query: 324 XXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENEKVRLAYRPVHXNTL 145 A T SA R ESRGAH+R DF RDDE+W+ HSL E+E + R V+ + Sbjct: 519 LMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESES--MTRRSVN---M 573 Query: 144 DDEIE-SFPPKARVY 103 + ++ +FPPK R Y Sbjct: 574 EPKLRPAFPPKIRTY 588
>DHSA_ECOL6 (P0AC42) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 66.2 bits (160), Expect = 6e-11 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 1/135 (0%) Frame = -2 Query: 504 IRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXXX 325 IR Q MQ+ +VFR + + +G + E ++ D S +N+ Sbjct: 459 IRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDN 518 Query: 324 XXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENEKVRLAYRPVHXNTL 145 A T SA R ESRGAH+R DF RDDE+W+ HSL E+E + R V+ + Sbjct: 519 LMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESES--MTRRSVN---M 573 Query: 144 DDEIE-SFPPKARVY 103 + ++ +FPPK R Y Sbjct: 574 EPKLRPAFPPKIRTY 588
>DHSA_ECO57 (P0AC43) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 66.2 bits (160), Expect = 6e-11 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 1/135 (0%) Frame = -2 Query: 504 IRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXXX 325 IR Q MQ+ +VFR + + +G + E ++ D S +N+ Sbjct: 459 IRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDN 518 Query: 324 XXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENEKVRLAYRPVHXNTL 145 A T SA R ESRGAH+R DF RDDE+W+ HSL E+E + R V+ + Sbjct: 519 LMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESES--MTRRSVN---M 573 Query: 144 DDEIE-SFPPKARVY 103 + ++ +FPPK R Y Sbjct: 574 EPKLRPAFPPKIRTY 588
>FRDA_PROVU (P20922) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 598 Score = 62.8 bits (151), Expect = 6e-10 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 3/147 (2%) Frame = -2 Query: 534 NANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNS 355 N GS +IR M+ ++RT E +++ +++ E + V+I D S ++N+ Sbjct: 442 NQKGSENWAQIRDEMGEAMEEGCGIYRTPELMQKTIDKLTELKERFKHVEIKDTSSVFNT 501 Query: 354 DXXXXXXXXXXXXNACITMYSAEARKESRGAHAR--EDFTTRDDEHWMKHSLGYWENEKV 181 D A +SA RKESRGAH R E T RDD +++KH+L ++ E Sbjct: 502 DLLYKIELGFGLDVAECMAHSAFNRKESRGAHQRLDEGCTERDDVNFLKHTLAFYNPEGA 561 Query: 180 -RLAYRPVHXNTLDDEIESFPPKARVY 103 RL Y D +I P RVY Sbjct: 562 PRLEYS-------DVKITKSAPAKRVY 581
>DHSA_SALTY (Q8ZQU3) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 588 Score = 61.6 bits (148), Expect = 1e-09 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 1/135 (0%) Frame = -2 Query: 504 IRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXXX 325 IR Q MQ+ +VFR + + +G + E ++ D S +N+ Sbjct: 459 IRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDN 518 Query: 324 XXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYWENEKVRLAYRPVHXNTL 145 A T SA R ESRGAH+R DF RDD +W+ H+L ++ + + R V+ + Sbjct: 519 LMETAYATAVSANFRTESRGAHSRFDFPERDDANWLCHTL--YQPQTESMTRRSVN---M 573 Query: 144 DDEIE-SFPPKARVY 103 + ++ +FPPK R Y Sbjct: 574 EPKLRPAFPPKIRTY 588
>FRDA_WOLSU (P17412) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 656 Score = 55.1 bits (131), Expect = 1e-07 Identities = 33/127 (25%), Positives = 55/127 (43%) Frame = -2 Query: 555 AWLXXXXNANGSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISD 376 A++ + G+ KI+ + +M + +FR LE+ + + ++ V I + Sbjct: 449 AYMKSLVESKGTEDVFKIKNRMKDVMDDNVGIFRDGPHLEKAVKELEELYKKSKNVGIKN 508 Query: 375 RSLIWNSDXXXXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYW 196 + L N + A A R ESRGAH RED+ RDD +W+ +L W Sbjct: 509 KRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRGAHNREDYPKRDDINWLNRTLASW 568 Query: 195 ENEKVRL 175 N + L Sbjct: 569 PNPEQTL 575
>FRDA_HELPY (O06913) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 714 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/104 (27%), Positives = 44/104 (42%) Frame = -2 Query: 507 KIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXX 328 +IR + +M VFR + LEE + + + + + ++ L N + Sbjct: 492 EIRERMKEVMDEKVGVFREGKRLEEALKELQELYARSKNICVKNKVLHNNPELEDAYRTK 551 Query: 327 XXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYW 196 A A R ESRGAH R D+ RDDE W+ +L W Sbjct: 552 KMLKLALCITQGALLRTESRGAHTRIDYPKRDDEKWLNRTLASW 595
>FRDA_HELPJ (Q9ZMP0) Fumarate reductase flavoprotein subunit (EC 1.3.99.1)| Length = 714 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/104 (27%), Positives = 44/104 (42%) Frame = -2 Query: 507 KIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXX 328 +IR + +M VFR + LEE + + + + + ++ L N + Sbjct: 492 EIRERMKEVMDEKVGVFREGKKLEEALKELQELYARSKNICVKNKVLHNNPELEDAYRTK 551 Query: 327 XXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKHSLGYW 196 A A R ESRGAH R D+ RDDE W+ +L W Sbjct: 552 KMLKLALCITQGALLRTESRGAHTRIDYPKRDDEKWLNRTLASW 595
>NADB_STRCO (Q9X8N8) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 580 Score = 38.9 bits (89), Expect = 0.010 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Frame = -2 Query: 501 RLNXQRIMQNXXAVFRTQETLEEGCX----LISKAWESYHXV-KISDRSL-IWNSDXXXX 340 RL QRIM V R+ ++L L ++A E+ H K S+ + W + Sbjct: 449 RLTIQRIMTEGAGVLRSADSLARAADRLHGLHAEAREALHEHGKTSEPGVDTWEA----- 503 Query: 339 XXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDEHWMKH 211 A + + +A R+E+RG H RED RDD W +H Sbjct: 504 ---TNLLCVARVLVAAAARREETRGCHWREDHADRDDTTWRRH 543
>DHSA_BACSU (P08065) Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)| Length = 585 Score = 38.5 bits (88), Expect = 0.013 Identities = 28/120 (23%), Positives = 46/120 (38%) Frame = -2 Query: 462 VFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXXXXXXXXXXXXNACITMYSAEA 283 V R + L + I + E + + I+D + N A + A Sbjct: 464 VVRHNDKLLKTDDKIQELMERFKKININDTTKWSNQGAMFTRQFSNMLQLARVITLGAYN 523 Query: 282 RKESRGAHAREDFTTRDDEHWMKHSLGYWENEKVRLAYRPVHXNTLDDEIESFPPKARVY 103 R ESRGAH + D+ R+D+ W+K ++ K Y D ++ P+ R Y Sbjct: 524 RNESRGAHYKPDYPERNDDEWLKTTMA-----KHVSPYEAPEFEYQDVDVSLITPRKRDY 578
>Y033_METJA (Q60356) Hypothetical FAD-dependent oxidoreductase MJ0033| Length = 539 Score = 33.9 bits (76), Expect = 0.32 Identities = 26/100 (26%), Positives = 45/100 (45%) Frame = -2 Query: 525 GSLXXXKIRLNXQRIMQNXXAVFRTQETLEEGCXLISKAWESYHXVKISDRSLIWNSDXX 346 G L + + +++M + ++ R ++ L++ I + + VK++ +I D Sbjct: 418 GDLNVYNLIEDLRKVMWDYVSIIRNEDGLKKALEKIDEIERNIDNVKVN--GII---DLQ 472 Query: 345 XXXXXXXXXXNACITMYSAEARKESRGAHAREDFTTRDDE 226 A + SA RKESRGAH REDF +E Sbjct: 473 NYFELKNMVVVAKLVTKSALYRKESRGAHYREDFPETKEE 512
>NADB_SULTO (Q972D2) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 472 Score = 33.1 bits (74), Expect = 0.54 Identities = 16/31 (51%), Positives = 21/31 (67%) Frame = -2 Query: 306 ITMYSAEARKESRGAHAREDFTTRDDEHWMK 214 +T +AE RKESRG H RED+ + D +W K Sbjct: 435 LTALAAEIRKESRGNHFREDYPYK-DPNWEK 464
>NADB_AGRT5 (Q8U8J4) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 522 Score = 30.0 bits (66), Expect = 4.6 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = -2 Query: 291 AEARKESRGAHAREDFTTRD 232 A R+ESRGAH R+DF+ +D Sbjct: 469 AALRRESRGAHFRDDFSQKD 488
>NADB_XYLFA (Q9PC57) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 512 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 291 AEARKESRGAHAREDFTTRDDEHWMKH 211 A R ESRGAHAR DF + D +H Sbjct: 464 AYLRTESRGAHARTDFPLKHDTTQRRH 490
>NADB_XYLFT (Q87D19) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 512 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -2 Query: 291 AEARKESRGAHAREDFTTRDD 229 A R ESRGAHAR DF + D Sbjct: 464 AHLRTESRGAHARTDFPLKHD 484 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,996,476 Number of Sequences: 219361 Number of extensions: 1069721 Number of successful extensions: 2357 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2301 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2342 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
