>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  267 bits (683), Expect(2) = 1e-90
 Identities = 132/132 (100%), Positives = 132/132 (100%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG
Sbjct: 296 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 355

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA
Sbjct: 356 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 415

Query: 295 NQDAMKTGSFYG 260
           NQDAMKTGSFYG
Sbjct: 416 NQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 1e-90
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 212 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 99
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  219 bits (558), Expect(2) = 2e-70
 Identities = 102/132 (77%), Positives = 120/132 (90%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G
Sbjct: 306 APTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVG 365

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           ++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDA
Sbjct: 366 VDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDA 425

Query: 295 NQDAMKTGSFYG 260
           N DA+K G+FYG
Sbjct: 426 NNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 2e-70
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -1

Query: 215 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 99
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  212 bits (539), Expect(2) = 2e-68
 Identities = 101/132 (76%), Positives = 117/132 (88%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G
Sbjct: 306 APTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLG 365

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           +E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDA
Sbjct: 366 VEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDA 425

Query: 295 NQDAMKTGSFYG 260
           N DA+  G+FYG
Sbjct: 426 NADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 2e-68
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 212 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 99
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  211 bits (537), Expect(2) = 4e-67
 Identities = 99/132 (75%), Positives = 117/132 (88%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G
Sbjct: 304 APTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVG 363

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           ++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDA
Sbjct: 364 VDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDA 423

Query: 295 NQDAMKTGSFYG 260
           N+DA+  G+F+G
Sbjct: 424 NKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 4e-67
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 212 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 105
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  235 bits (599), Expect = 1e-61
 Identities = 110/132 (83%), Positives = 124/132 (93%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 296 APTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTG 355

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           +ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDA
Sbjct: 356 VENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDA 415

Query: 295 NQDAMKTGSFYG 260
           N DAMKTGSFYG
Sbjct: 416 NSDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  235 bits (599), Expect = 1e-61
 Identities = 110/132 (83%), Positives = 124/132 (93%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G
Sbjct: 293 APTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIG 352

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           +ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG A
Sbjct: 353 VENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQA 412

Query: 295 NQDAMKTGSFYG 260
           N DAMKTG+FYG
Sbjct: 413 NDDAMKTGAFYG 424

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  222 bits (566), Expect = 7e-58
 Identities = 103/132 (78%), Positives = 122/132 (92%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G
Sbjct: 306 APTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVG 365

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           +++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDA
Sbjct: 366 VDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDA 425

Query: 295 NQDAMKTGSFYG 260
           N DAM TG+FYG
Sbjct: 426 NSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  221 bits (564), Expect = 1e-57
 Identities = 102/131 (77%), Positives = 122/131 (93%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG
Sbjct: 302 APTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETG 361

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           +ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+A
Sbjct: 362 VENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEA 421

Query: 295 NQDAMKTGSFY 263
           N+DAMKTGSF+
Sbjct: 422 NEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  221 bits (562), Expect = 2e-57
 Identities = 106/130 (81%), Positives = 120/130 (92%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 310 APTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTG 369

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           IE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA
Sbjct: 370 IEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 429

Query: 295 NQDAMKTGSF 266
           N DA+ TG+F
Sbjct: 430 NADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  219 bits (558), Expect = 6e-57
 Identities = 105/128 (82%), Positives = 120/128 (93%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 305 APTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTG 364

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           IE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA
Sbjct: 365 IELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 424

Query: 295 NQDAMKTG 272
           N DA+ TG
Sbjct: 425 NADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  219 bits (557), Expect = 7e-57
 Identities = 101/130 (77%), Positives = 120/130 (92%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G
Sbjct: 306 APTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVG 365

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           ++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDA
Sbjct: 366 VDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDA 425

Query: 295 NQDAMKTGSF 266
           NQDA+K G+F
Sbjct: 426 NQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  215 bits (547), Expect = 1e-55
 Identities = 104/131 (79%), Positives = 115/131 (87%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TG
Sbjct: 310 APTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTG 369

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           IE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDA
Sbjct: 370 IEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDA 429

Query: 295 NQDAMKTGSFY 263
           N DA+  GSF+
Sbjct: 430 NADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  210 bits (535), Expect = 3e-54
 Identities = 94/131 (71%), Positives = 120/131 (91%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G
Sbjct: 308 APTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVG 367

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           ++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+A
Sbjct: 368 VDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNA 427

Query: 295 NQDAMKTGSFY 263
           N+DA+K+GSF+
Sbjct: 428 NEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  202 bits (513), Expect = 9e-52
 Identities = 91/131 (69%), Positives = 118/131 (90%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G
Sbjct: 310 APTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVG 369

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 296
           ++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+A
Sbjct: 370 VDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNA 429

Query: 295 NQDAMKTGSFY 263
           N+DA+K+GSF+
Sbjct: 430 NEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  171 bits (432), Expect = 2e-42
 Identities = 79/107 (73%), Positives = 93/107 (86%)
 Frame = -2

Query: 655 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTG 476
           APTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G
Sbjct: 303 APTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVG 362

Query: 475 IENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 335
           +E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 363 VERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  145 bits (365), Expect = 1e-34
 Identities = 72/116 (62%), Positives = 87/116 (75%)
 Frame = -2

Query: 652 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 473
           PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG+
Sbjct: 280 PTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGV 339

Query: 472 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 305
           + IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 340 DKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  112 bits (279), Expect = 1e-24
 Identities = 49/110 (44%), Positives = 74/110 (67%)
 Frame = -2

Query: 652 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 473
           P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G 
Sbjct: 180 PHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGY 239

Query: 472 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 323
           EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 240 ENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  106 bits (265), Expect = 5e-23
 Identities = 48/110 (43%), Positives = 72/110 (65%)
 Frame = -2

Query: 652 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 473
           P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G 
Sbjct: 180 PNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGF 239

Query: 472 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 323
           E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 240 ERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 574 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 395
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -2

Query: 430 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 275
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 274 GSFYG*KILHTHPPSLAA 221
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 491 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 616
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -2

Query: 577 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 398
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 397 KLLEYGHMLVQEQDNVKRV 341
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -2

Query: 430 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 275
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 274 GSFYG*KILHTHPPSLAA 221
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 327 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 431
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 493 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 386
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,972,588
Number of Sequences: 219361
Number of extensions: 1856833
Number of successful extensions: 5708
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5705
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)