Clone Name | rbah62f08 |
---|---|
Clone Library Name | barley_pub |
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 40 catgtcatttaatgacctctagtccctatttagtccctggaaacaaacgggtagggacta 99 ||||||||||||||||||||||||| | |||||||| || ||| |||||||||||||||| Sbjct: 148125 catgtcatttaatgacctctagtccatgtttagtccttgaaaagaaacgggtagggacta 148066 Query: 100 gggacttttaagttggaactagaaaa 125 | ||||||| |||||| |||| |||| Sbjct: 148065 gagactttttagttgggactaaaaaa 148040
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 99.6 bits (50), Expect = 8e-18 Identities = 97/115 (84%) Strand = Plus / Plus Query: 1 aactactactacattactaagggtaacatggnnnnnnnacatgtcatttaatgacctcta 60 |||| ||| |||||||||| ||||||||||| |||| ||||||||||| |||| Sbjct: 111464 aacttctagtacattactaggggtaacatggtctttttgcatggcatttaatgacatcta 111523 Query: 61 gtccctatttagtccctggaaacaaacgggtagggactagggacttttaagttgg 115 |||||| |||||||| || ||||||||||||| ||||||||||||||| |||||| Sbjct: 111524 gtccctgtttagtccatgaaaacaaacgggtaaggactagggactttttagttgg 111578
>ref|NM_196634.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0019M20.6), mRNA Length = 996 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 360 gcgacgatgtcacgcatgagcggcctggccttggggttacggctgaggcagtggtatgcc 419 ||||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||| Sbjct: 941 gcgacgatgtcccgcatgagcggcctcgccttggggttccggttcaggcagtggtacgcc 882 Query: 420 agcatggccgtcttgtgcac 439 ||||| |||| ||||||||| Sbjct: 881 agcatcgccgccttgtgcac 862
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 360 gcgacgatgtcacgcatgagcggcctggccttggggttacggctgaggcagtggtatgcc 419 ||||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||| Sbjct: 68455 gcgacgatgtcccgcatgagcggcctcgccttggggttccggttcaggcagtggtacgcc 68514 Query: 420 agcatggccgtcttgtgcac 439 ||||| |||| ||||||||| Sbjct: 68515 agcatcgccgccttgtgcac 68534
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 360 gcgacgatgtcacgcatgagcggcctggccttggggttacggctgaggcagtggtatgcc 419 ||||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||| Sbjct: 14888677 gcgacgatgtcccgcatgagcggcctcgccttggggttccggttcaggcagtggtacgcc 14888736 Query: 420 agcatggccgtcttgtgcac 439 ||||| |||| ||||||||| Sbjct: 14888737 agcatcgccgccttgtgcac 14888756
>dbj|AK106265.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F12, full insert sequence Length = 1573 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 360 gcgacgatgtcacgcatgagcggcctggccttggggttacggctgaggcagtggtatgcc 419 ||||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||| Sbjct: 1327 gcgacgatgtcccgcatgagcggcctcgccttggggttccggttcaggcagtggtacgcc 1268 Query: 420 agcatggccgtcttgtgcac 439 ||||| |||| ||||||||| Sbjct: 1267 agcatcgccgccttgtgcac 1248
>dbj|AK072305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A13, full insert sequence Length = 1527 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 360 gcgacgatgtcacgcatgagcggcctggccttggggttacggctgaggcagtggtatgcc 419 ||||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||| Sbjct: 1290 gcgacgatgtcccgcatgagcggcctcgccttggggttccggttcaggcagtggtacgcc 1231 Query: 420 agcatggccgtcttgtgcac 439 ||||| |||| ||||||||| Sbjct: 1230 agcatcgccgccttgtgcac 1211
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 360 gcgacgatgtcacgcatgagcggcctggccttggggttacggctgaggcagtggtatgcc 419 ||||||||||| |||||||||||||| ||||||||||| ||| | ||||||||||| ||| Sbjct: 14896918 gcgacgatgtcccgcatgagcggcctcgccttggggttccggttcaggcagtggtacgcc 14896977 Query: 420 agcatggccgtcttgtgcac 439 ||||| |||| ||||||||| Sbjct: 14896978 agcatcgccgccttgtgcac 14896997
>ref|XM_470265.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1053 Score = 93.7 bits (47), Expect = 5e-16 Identities = 118/141 (83%), Gaps = 3/141 (2%) Strand = Plus / Minus Query: 338 ctgctgcaggggctcaagggtggcgacgatgtcacgcatgagcggcctggccttggggtt 397 |||||| || ||||| | ||||||||| ||||| ||||| | |||||| ||||||||||| Sbjct: 1005 ctgctgaagaggctccaaggtggcgacaatgtcgcgcatcaacggcctagccttggggtt 946 Query: 398 acggctgaggcagtggtatgccagcatggccgtcttgtgcacggccttgacagggtagtc 457 ||| ||||||| ||||| |||||||| |||||||| || || ||||| || |||||||| Sbjct: 945 gcggttgaggcaatggtaggccagcatcgccgtcttctggactgccttcaccgggtagtc 886 Query: 458 gtcggcggcgagcctggggtc 478 |||||| ||||||||||| Sbjct: 885 ctcggcg---agcctggggtc 868
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 5e-16 Identities = 118/141 (83%), Gaps = 3/141 (2%) Strand = Plus / Minus Query: 338 ctgctgcaggggctcaagggtggcgacgatgtcacgcatgagcggcctggccttggggtt 397 |||||| || ||||| | ||||||||| ||||| ||||| | |||||| ||||||||||| Sbjct: 3150235 ctgctgaagaggctccaaggtggcgacaatgtcgcgcatcaacggcctagccttggggtt 3150176 Query: 398 acggctgaggcagtggtatgccagcatggccgtcttgtgcacggccttgacagggtagtc 457 ||| ||||||| ||||| |||||||| |||||||| || || ||||| || |||||||| Sbjct: 3150175 gcggttgaggcaatggtaggccagcatcgccgtcttctggactgccttcaccgggtagtc 3150116 Query: 458 gtcggcggcgagcctggggtc 478 |||||| ||||||||||| Sbjct: 3150115 ctcggcg---agcctggggtc 3150098 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 5457312 cggctgcggctgcggctgctgctgc 5457336 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctg 343 ||||||||||||| |||||||||| Sbjct: 5457318 cggctgcggctgctgctgctgctg 5457341
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 93.7 bits (47), Expect = 5e-16 Identities = 118/141 (83%), Gaps = 3/141 (2%) Strand = Plus / Minus Query: 338 ctgctgcaggggctcaagggtggcgacgatgtcacgcatgagcggcctggccttggggtt 397 |||||| || ||||| | ||||||||| ||||| ||||| | |||||| ||||||||||| Sbjct: 73248 ctgctgaagaggctccaaggtggcgacaatgtcgcgcatcaacggcctagccttggggtt 73189 Query: 398 acggctgaggcagtggtatgccagcatggccgtcttgtgcacggccttgacagggtagtc 457 ||| ||||||| ||||| |||||||| |||||||| || || ||||| || |||||||| Sbjct: 73188 gcggttgaggcaatggtaggccagcatcgccgtcttctggactgccttcaccgggtagtc 73129 Query: 458 gtcggcggcgagcctggggtc 478 |||||| ||||||||||| Sbjct: 73128 ctcggcg---agcctggggtc 73111
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 5e-16 Identities = 118/141 (83%), Gaps = 3/141 (2%) Strand = Plus / Minus Query: 338 ctgctgcaggggctcaagggtggcgacgatgtcacgcatgagcggcctggccttggggtt 397 |||||| || ||||| | ||||||||| ||||| ||||| | |||||| ||||||||||| Sbjct: 3150346 ctgctgaagaggctccaaggtggcgacaatgtcgcgcatcaacggcctagccttggggtt 3150287 Query: 398 acggctgaggcagtggtatgccagcatggccgtcttgtgcacggccttgacagggtagtc 457 ||| ||||||| ||||| |||||||| |||||||| || || ||||| || |||||||| Sbjct: 3150286 gcggttgaggcaatggtaggccagcatcgccgtcttctggactgccttcaccgggtagtc 3150227 Query: 458 gtcggcggcgagcctggggtc 478 |||||| ||||||||||| Sbjct: 3150226 ctcggcg---agcctggggtc 3150209 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 5456527 cggctgcggctgcggctgctgctgc 5456551 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctg 343 ||||||||||||| |||||||||| Sbjct: 5456533 cggctgcggctgctgctgctgctg 5456556
>dbj|AK065635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030N19, full insert sequence Length = 1502 Score = 93.7 bits (47), Expect = 5e-16 Identities = 118/141 (83%), Gaps = 3/141 (2%) Strand = Plus / Minus Query: 338 ctgctgcaggggctcaagggtggcgacgatgtcacgcatgagcggcctggccttggggtt 397 |||||| || ||||| | ||||||||| ||||| ||||| | |||||| ||||||||||| Sbjct: 1253 ctgctgaagaggctccaaggtggcgacaatgtcgcgcatcaacggcctagccttggggtt 1194 Query: 398 acggctgaggcagtggtatgccagcatggccgtcttgtgcacggccttgacagggtagtc 457 ||| ||||||| ||||| |||||||| |||||||| || || ||||| || |||||||| Sbjct: 1193 gcggttgaggcaatggtaggccagcatcgccgtcttctggactgccttcaccgggtagtc 1134 Query: 458 gtcggcggcgagcctggggtc 478 |||||| ||||||||||| Sbjct: 1133 ctcggcg---agcctggggtc 1116
>gb|AF509769.1| Hordeum vulgare subsp. vulgare isolate NRG027 Rpg1 region, genomic sequence Length = 3424 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 40 catgtcatttaatgacctctagtccctatttagtccctggaaacaaacgggtagggacta 99 ||||||||||||| |||||||||| | |||| ||||||||| ||||| | ||||||||| Sbjct: 1315 catgtcatttaataacctctagtcaatgtttaatccctggaatcaaacagatagggacta 1256 Query: 100 gggacttttaagtt 113 ||||||||| |||| Sbjct: 1255 gggactttttagtt 1242
>gb|BC053004.1| Mus musculus cDNA clone IMAGE:5698071, **** WARNING: chimeric clone **** Length = 4193 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgca 345 |||||||||||||||||||||||||| Sbjct: 3030 cggctgcggctgcagctgctgctgca 3005
>gb|BC059024.1| Mus musculus glycosyltransferase 28 domain containing 1, mRNA (cDNA clone IMAGE:6810589) Length = 3010 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgca 345 |||||||||||||||||||||||||| Sbjct: 1864 cggctgcggctgcagctgctgctgca 1839
>emb|AL713978.9| Mouse DNA sequence from clone RP23-159H8 on chromosome X, complete sequence Length = 183455 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgca 345 |||||||||||||||||||||||||| Sbjct: 148119 cggctgcggctgcagctgctgctgca 148094
>ref|NM_191276.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||||||||||||||| Sbjct: 758 cggctgcggctgcagctgctgctgc 782
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||||||||||||||| Sbjct: 31687368 cggctgcggctgcagctgctgctgc 31687392
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||||||||||||||| Sbjct: 101100 cggctgcggctgcagctgctgctgc 101124
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctg 343 ||||||||||||||||| |||||||||| Sbjct: 14794 gctccggctgcggctgccgctgctgctg 14821
>ref|XM_860319.1| PREDICTED: Canis familiaris similar to PTK7 protein tyrosine kinase 7 isoform d precursor, transcript variant 4 (LOC481808), mRNA Length = 3227 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgcag 346 ||||||||| |||||||||||||||| |||| Sbjct: 6 gctccggctccggctgcagctgctgcagcag 36
>ref|XM_860303.1| PREDICTED: Canis familiaris similar to PTK7 protein tyrosine kinase 7 isoform d precursor, transcript variant 3 (LOC481808), mRNA Length = 2957 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgcag 346 ||||||||| |||||||||||||||| |||| Sbjct: 6 gctccggctccggctgcagctgctgcagcag 36
>ref|XM_538929.2| PREDICTED: Canis familiaris similar to PTK7 protein tyrosine kinase 7 isoform d precursor, transcript variant 1 (LOC481808), mRNA Length = 3347 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgcag 346 ||||||||| |||||||||||||||| |||| Sbjct: 6 gctccggctccggctgcagctgctgcagcag 36
>ref|XM_860273.1| PREDICTED: Canis familiaris similar to PTK7 protein tyrosine kinase 7 isoform d precursor, transcript variant 2 (LOC481808), mRNA Length = 3179 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgcag 346 ||||||||| |||||||||||||||| |||| Sbjct: 6 gctccggctccggctgcagctgctgcagcag 36
>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx homologue on hoxBa Length = 235883 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 323 ctgcggctgcagctgctgctgca 345 ||||||||||||||||||||||| Sbjct: 39335 ctgcggctgcagctgctgctgca 39357
>gb|AF325500.1|AF325500 Antheraea yamamai transposon mariner-like element transposase gene, partial cds; and fibroin gene, complete cds Length = 9921 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgc 344 ||||||||||||||||||||||| Sbjct: 8879 gctgcggctgcagctgctgctgc 8857 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 5858 gcggctgcagctgctgctgc 5839 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 5372 gcggctgcagctgctgctgc 5353 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 4688 gctgcggctgcagctgctgc 4669
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcag 346 ||||||||||||| ||||||||||||| Sbjct: 177132 cggctgcggctgccgctgctgctgcag 177106
>gb|AY109753.1| Zea mays CL12097_1 mRNA sequence Length = 1300 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 361 cgacgatgtcacgcatgagcggcctggccttggggttacggctgaggcagt 411 |||||| ||| | |||||||||||||||||| ||||| |||| ||||||| Sbjct: 743 cgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagt 693
>gb|AF069324.1|AF069324 Mesembryanthemum crystallinum 26S proteasome regulatory subunit S5A mRNA, complete cds Length = 1805 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 308 caccaccagctccggctgcggctgcagctgc 338 ||||||||||| ||||||| ||||||||||| Sbjct: 802 caccaccagctgcggctgcagctgcagctgc 772 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 794 gctgcggctgcagctgcagctgcag 770
>gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome 9, complete sequence Length = 171426 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgcag 346 |||| ||||| ||||||||||||||||||| Sbjct: 164057 ctccagctgcagctgcagctgctgctgcag 164028
>ref|NM_058243.1| Homo sapiens bromodomain containing 4 (BRD4), transcript variant long, mRNA Length = 5198 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgca 345 ||||||| |||||||||||||||||| Sbjct: 3144 cggctgctgctgcagctgctgctgca 3119
>ref|XM_601010.2| PREDICTED: Bos taurus similar to bassoon (LOC522724), mRNA Length = 10599 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgcag 346 |||| ||||| ||||||||||||||||||| Sbjct: 6213 ctccagctgctgctgcagctgctgctgcag 6184
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgcaggggctca 353 ||||||||||||| ||||||||||| | |||||| Sbjct: 123204 cggctgcggctgcggctgctgctgctgtggctca 123237
>ref|NM_007567.1| Mus musculus bassoon (Bsn), mRNA Length = 11936 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgcag 346 |||| ||||| ||||||||||||||||||| Sbjct: 7425 ctccagctgcagctgcagctgctgctgcag 7396
>gb|AF386649.1|AF386649 Homo sapiens bromodomain-containing 4 (BRD4) mRNA, complete cds Length = 5198 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgca 345 ||||||| |||||||||||||||||| Sbjct: 3144 cggctgctgctgcagctgctgctgca 3119
>gb|AC004798.1|AC004798 Homo sapiens chromosome 19, cosmid R31546, complete sequence Length = 42497 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgca 345 ||||||| |||||||||||||||||| Sbjct: 8083 cggctgctgctgcagctgctgctgca 8108
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggctca 353 ||||||||||||| ||||||||||| | |||||| Sbjct: 22218094 cggctgcggctgcggctgctgctgctgtggctca 22218061
>dbj|AK071098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C09, full insert sequence Length = 1505 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggctca 353 ||||||||||||| ||||||||||| | |||||| Sbjct: 1118 cggctgcggctgcggctgctgctgctgtggctca 1085
>dbj|AK061258.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B06, full insert sequence Length = 1390 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggctca 353 ||||||||||||| ||||||||||| | |||||| Sbjct: 1016 cggctgcggctgcggctgctgctgctgtggctca 983
>gb|AY111890.1| Zea mays CL54662_1 mRNA sequence Length = 603 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 381 ggcctggccttggggttacggctgaggcag 410 ||||| |||||||||| ||||||||||||| Sbjct: 474 ggcctagccttggggtcacggctgaggcag 503
>gb|AC137678.11| Mus musculus chromosome 9, clone RP24-484G16, complete sequence Length = 172337 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 317 ctccggctgcggctgcagctgctgctgcag 346 |||| ||||| ||||||||||||||||||| Sbjct: 123654 ctccagctgcagctgcagctgctgctgcag 123683
>gb|AY106284.1| Zea mays PCO101835 mRNA sequence Length = 741 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 314 cagctccggctgcggctgcagctgctgctg 343 ||||| ||||||||||||| |||||||||| Sbjct: 338 cagctgcggctgcggctgctgctgctgctg 309
>emb|Y17037.1|MMY17037 Mus musculus bassoon gene, exon 4 and 5 Length = 8748 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgcag 346 |||| ||||| ||||||||||||||||||| Sbjct: 6719 ctccagctgcagctgcagctgctgctgcag 6690
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggctca 353 ||||||||||||| ||||||||||| | |||||| Sbjct: 22528005 cggctgcggctgcggctgctgctgctgtggctca 22527972
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcaggggct 351 ||||||| ||| |||||||||||||||||| Sbjct: 1187691 gctgcgggtgcggctgctgctgcaggggct 1187662
>ref|XM_514796.1| PREDICTED: Pan troglodytes similar to Myelin transcription factor 1 (MYT1) (MYTI) (Proteolipid protein binding protein) (PLPB1) (LOC458428), mRNA Length = 4848 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 1852 ggctgctgctgcagctgctgctgctgggg 1824
>gb|DQ213344.1| Taeniopygia guttata clone 0063P0009D06 RIKEN cDNA 2510049J12-like mRNA, complete sequence Length = 1108 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 gctgcagctgctgctgcaggg 348 ||||||||||||||||||||| Sbjct: 586 gctgcagctgctgctgcaggg 566
>ref|NM_004535.2| Homo sapiens myelin transcription factor 1 (MYT1), mRNA Length = 5550 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 2441 ggctgctgctgcagctgctgctgctgggg 2413
>ref|XM_525981.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC470600), mRNA Length = 3585 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 3308 gctgcggctgcagctgcagctgcag 3284
>gb|AY439180.1| Drosophila subobscura troponin I-b1 (TpnI) mRNA, complete cds, alternatively spliced Length = 881 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagct 336 ||||||||||||||||||||| Sbjct: 74 gctccggctgcggctgcagct 94
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||||| |||||| |||||||||| Sbjct: 532431 gctccggctgccgctgcacctgctgctgc 532403
>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence Length = 164920 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 88358 ctcctgctgcagctgcagctgctgctgca 88386
>ref|XM_878567.1| PREDICTED: Bos taurus hypothetical LOC534759, transcript variant 6 (LOC534759), mRNA Length = 6743 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 |||||||||||| || ||||||||||||| Sbjct: 2862 gctccggctgcgactacagctgctgctgc 2834
>ref|XM_614639.2| PREDICTED: Bos taurus hypothetical LOC534759, transcript variant 1 (LOC534759), mRNA Length = 6732 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 |||||||||||| || ||||||||||||| Sbjct: 2851 gctccggctgcgactacagctgctgctgc 2823
>ref|XM_866439.1| PREDICTED: Bos taurus hypothetical LOC534759, transcript variant 2 (LOC534759), mRNA Length = 6866 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 |||||||||||| || ||||||||||||| Sbjct: 2985 gctccggctgcgactacagctgctgctgc 2957
>ref|XM_878389.1| PREDICTED: Bos taurus hypothetical LOC534759, transcript variant 3 (LOC534759), mRNA Length = 7467 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 |||||||||||| || ||||||||||||| Sbjct: 3586 gctccggctgcgactacagctgctgctgc 3558
>ref|XM_322995.1| Neurospora crassa OR74A hypothetical protein (NCU03694.1) partial mRNA Length = 1704 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 |||| |||||||||||||||||||| Sbjct: 1579 cggcggcggctgcagctgctgctgc 1555
>gb|AY654296.1| Nephila clavipes clone var4 major ampullate spidroin 2 gene, partial cds Length = 990 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||| ||||||||||||| Sbjct: 292 gctgcggctgcggctgctgctgcag 268
>ref|XM_881610.1| PREDICTED: Bos taurus hypothetical protein LOC616394 (LOC616394), mRNA Length = 270 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 48 cggctgcggctgctgctgctgctgc 24 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 53 ggctgcggctgcggctgctgctgc 30
>ref|XM_956377.1| Neurospora crassa OR74A hypothetical protein [Neurospora crassa OR74A] ) (NCU03694.1) partial mRNA Length = 1704 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 |||| |||||||||||||||||||| Sbjct: 1579 cggcggcggctgcagctgctgctgc 1555
>gb|AC114409.17| Mus musculus chromosome 5, clone RP23-148F6, complete sequence Length = 222692 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 cagctgctgctgcaggggctc 352 ||||||||||||||||||||| Sbjct: 118906 cagctgctgctgcaggggctc 118926
>ref|NM_194250.1| Homo sapiens chromosome 2 open reading frame 10 (C2orf10), mRNA Length = 4700 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 3947 gctgcggctgcagctgcagctgcag 3923
>gb|BC037202.1| Mus musculus ribosomal protein L14, mRNA (cDNA clone IMAGE:3990347), partial cds Length = 754 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 473 tgcggctgcagctgctgctgc 493
>gb|BC008177.1| Mus musculus ribosomal protein L14, mRNA (cDNA clone IMAGE:3588708), partial cds Length = 573 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 321 tgcggctgcagctgctgctgc 341
>ref|XM_974043.1| PREDICTED: Mus musculus nemo like kinase, transcript variant 4 (Nlk), mRNA Length = 1872 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 474 ggctgcggctgcagctgctgc 454
>ref|XM_849073.1| PREDICTED: Canis familiaris similar to KIAA1853 protein (LOC611405), mRNA Length = 1830 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||||||||||| ||||| ||||| Sbjct: 1698 gctccggctgcggctgcggctgcggctgc 1670
>gb|BT011197.1| Drosophila melanogaster GH26440 full insert cDNA Length = 6988 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2431 ctcctgctgcagctgcagctgctgctgca 2403
>ref|XM_753356.1| Ustilago maydis 521 hypothetical protein (UM02302.1) partial mRNA Length = 2895 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||||||||| ||||| Sbjct: 763 cggctgcggctgcagctgcggctgc 739
>ref|XM_843660.1| PREDICTED: Canis familiaris similar to frizzled 4, transcript variant 2 (LOC485149), mRNA Length = 1626 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 67 cggctgcggctgctgctgctgctgc 91
>ref|XM_755060.1| Ustilago maydis 521 hypothetical protein (UM04006.1) partial mRNA Length = 1440 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 83 cggctgcggctgctgctgctgctgc 107
>ref|XM_757452.1| Ustilago maydis 521 hypothetical protein (UM06398.1) partial mRNA Length = 2427 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 1596 cggctgcggctgcggctgctgctgc 1572 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 1590 cggctgcggctgctgctgctgctgc 1566
>emb|AJ538317.1|PFL538317 Platichthys flesus microsatellite DNA, locus StPfl019 Length = 604 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 280 cggctgcggctgctgctgctgctgc 304
>ref|XM_539745.2| PREDICTED: Canis familiaris similar to Achaete-scute homolog 1 (LOC482628), mRNA Length = 1566 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 567 cggctgcggctgcggctgctgctgc 543
>ref|XM_748781.1| Aspergillus fumigatus Af293 SH2-containing inositol 5-phosphatase 2 (Afu5g07600) partial mRNA Length = 1356 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 1155 cggctgcggctgcggctgctgctgc 1131
>gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, complete sequence Length = 242222 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 79321 gctgctgctgcagctgctgctgcag 79345
>ref|XM_851280.1| PREDICTED: Canis familiaris hypothetical LOC23131, transcript variant 4 (LOC480500), mRNA Length = 4620 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||||||||| || |||||||||| Sbjct: 3018 gctccggctgcggctacaactgctgctgc 2990
>ref|XM_851236.1| PREDICTED: Canis familiaris hypothetical LOC23131, transcript variant 3 (LOC480500), mRNA Length = 4438 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||||||||| || |||||||||| Sbjct: 2836 gctccggctgcggctacaactgctgctgc 2808
>ref|XM_851196.1| PREDICTED: Canis familiaris hypothetical LOC23131, transcript variant 2 (LOC480500), mRNA Length = 4449 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||||||||| || |||||||||| Sbjct: 2847 gctccggctgcggctacaactgctgctgc 2819
>ref|XM_537619.2| PREDICTED: Canis familiaris hypothetical LOC23131, transcript variant 1 (LOC480500), mRNA Length = 4570 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||||||||| || |||||||||| Sbjct: 2968 gctccggctgcggctacaactgctgctgc 2940
>emb|CR646585.2|CNS0EXVJ Tetraodon nigroviridis full-length cDNA Length = 892 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 gctgcagctgctgctgcaggggctc 352 ||||||||||| ||||||||||||| Sbjct: 791 gctgcagctgcagctgcaggggctc 815
>gb|BC053638.1| Homo sapiens myelin transcription factor 1, mRNA (cDNA clone IMAGE:4933873), partial cds Length = 4362 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 1253 ggctgctgctgcagctgctgctgctgggg 1225
>gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete sequence Length = 127843 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 98974 cggctgcggctgcggctgctgctgc 98950
>gb|AY327407.1| Homo sapiens hypothetical protein mRNA, complete cds Length = 4700 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 3947 gctgcggctgcagctgcagctgcag 3923
>ref|NM_003458.2| Homo sapiens bassoon (presynaptic cytomatrix protein) (BSN), mRNA Length = 15966 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 7510 gctgctgctgcagctgctgctgcag 7486
>ref|NM_019146.1| Rattus norvegicus bassoon (Bsn), mRNA Length = 12507 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 7479 gctgctgctgcagctgctgctgcag 7455
>gb|AF499740.1| Pisum sativum translation initiation factor mRNA, complete cds Length = 3499 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 tccggctgcggctgcagctgc 338 ||||||||||||||||||||| Sbjct: 267 tccggctgcggctgcagctgc 247
>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the 3' end of the OPRL1 gene for opiate receptor-like 1 protein, the GPR8 gene encoding a G protein-coupled receptor, the KIAA0835 gene encoding a protein similar to the myelin transcription factor 1 (MYT1), a novel gene, 7 CpG islands, ESTs, STSs and GSSs, complete sequence Length = 179888 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 124864 ggctgctgctgcagctgctgctgctgggg 124836
>ref|NM_204875.1| Gallus gallus protein tyrosine phosphatase, non-receptor type 1 (PTPN1), mRNA Length = 1926 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||| ||||| ||||||||||||| Sbjct: 54 gctccggctccggctccagctgctgctgc 26
>emb|AL451014.1|NCB9B15 Neurospora crassa DNA linkage group V BAC clone B9B15 Length = 81650 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 |||| |||||||||||||||||||| Sbjct: 33896 cggcggcggctgcagctgctgctgc 33920
>emb|AJ308121.2|LFL308121 Lampetra fluviatilis partial mRNA for intermediate filament protein, desmin Length = 1103 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 1011 gctgctgctgcagctgctgctgcag 987
>emb|CR792458.6| Zebrafish DNA sequence from clone RP71-47I2, complete sequence Length = 186632 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgctgcag 346 |||||||| |||||||||||||||| Sbjct: 166274 gctgcggcagcagctgctgctgcag 166298
>emb|AL591376.11| Mouse DNA sequence from clone RP23-404C20 on chromosome 11 Contains the 5' end of the Nlk gene for nemo like kinase, a laminin receptor 1 (ribosomal protein SA) (Lamr1) pseudogene and a novel gene, complete sequence Length = 141489 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 44147 ggctgcggctgcagctgctgc 44167
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 843 cggctgcggctgcggctgctgctgc 867 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctg 343 ||||||||||||| |||||||||| Sbjct: 849 cggctgcggctgctgctgctgctg 872
>gb|BC058652.1| Mus musculus nemo like kinase, mRNA (cDNA clone MGC:76386 IMAGE:6406851), complete cds Length = 4461 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 1356 ggctgcggctgcagctgctgc 1336
>gb|BC057667.1| Mus musculus nemo like kinase, mRNA (cDNA clone MGC:68238 IMAGE:4235238), complete cds Length = 2572 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 493 ggctgcggctgcagctgctgc 473
>gb|AY129455.1| Drosophila melanogaster RE30936 full insert cDNA Length = 6077 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 3847 tgcggctgcagctgctgctgc 3827
>dbj|AB028973.1| Homo sapiens mRNA for KIAA1050 protein, partial cds Length = 5969 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 1201 ggctgctgctgcagctgctgctgctgggg 1173
>gb|AY118720.1| Drosophila melanogaster AT31405 full insert cDNA Length = 1011 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 814 tgcggctgcagctgctgctgc 794
>dbj|AK127762.1| Homo sapiens cDNA FLJ45863 fis, clone OCBBF3001076 Length = 3860 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 3124 gctgcggctgcagctgcagctgcag 3100
>ref|NM_008702.2| Mus musculus nemo like kinase (Nlk), mRNA Length = 4461 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 1356 ggctgcggctgcagctgctgc 1336
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 53906 cggctgcggctgcggctgctgctgc 53930 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctg 343 ||||||||||||| |||||||||| Sbjct: 53912 cggctgcggctgctgctgctgctg 53935
>dbj|AK055275.1| Homo sapiens cDNA FLJ30713 fis, clone FCBBF2001480 Length = 2416 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 1680 gctgcggctgcagctgcagctgcag 1656
>ref|NM_169783.1| Drosophila melanogaster couch potato CG31243-RB, transcript variant B (cpo), mRNA Length = 6111 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 3884 tgcggctgcagctgctgctgc 3864
>ref|NM_169782.1| Drosophila melanogaster couch potato CG31243-RA, transcript variant A (cpo), mRNA Length = 6238 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 4011 tgcggctgcagctgctgctgc 3991
>ref|NM_169781.1| Drosophila melanogaster couch potato CG31243-RE, transcript variant E (cpo), mRNA Length = 6181 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 3954 tgcggctgcagctgctgctgc 3934
>ref|NM_134300.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RC, transcript variant C (Rbp9), mRNA Length = 3427 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2488 ctcctgctgcagctgcagctgctgctgca 2460
>ref|NM_134299.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RF, transcript variant F (Rbp9), mRNA Length = 3412 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2473 ctcctgctgcagctgcagctgctgctgca 2445
>ref|NM_134298.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RE, transcript variant E (Rbp9), mRNA Length = 3402 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2463 ctcctgctgcagctgcagctgctgctgca 2435
>ref|NM_134297.3| Drosophila melanogaster RNA-binding protein 9 CG3151-RB, transcript variant B (Rbp9), mRNA Length = 3417 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2478 ctcctgctgcagctgcagctgctgctgca 2450
>ref|NM_080105.2| Drosophila melanogaster couch potato CG31243-RF, transcript variant F (cpo), mRNA Length = 5621 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 3394 tgcggctgcagctgctgctgc 3374
>ref|NM_057589.2| Drosophila melanogaster RNA-binding protein 9 CG3151-RA, transcript variant A (Rbp9), mRNA Length = 3495 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2556 ctcctgctgcagctgcagctgctgctgca 2528
>ref|NM_057588.2| Drosophila melanogaster RNA-binding protein 9 CG3151-RD, transcript variant D (Rbp9), mRNA Length = 3480 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2541 ctcctgctgcagctgcagctgctgctgca 2513
>ref|NM_001014462.1| Drosophila melanogaster RNA-binding protein 9 CG3151-RG, transcript variant G (Rbp9), mRNA Length = 6958 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 2431 ctcctgctgcagctgcagctgctgctgca 2403
>gb|AY070496.1| Drosophila melanogaster GH07331 full length cDNA Length = 923 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||| ||||||||||||||||| Sbjct: 101 cggctgctgctgcagctgctgctgc 125
>gb|AY014503.1| Drosophila montana strain Utah9 suppressor of sable (su(s)) gene, partial cds Length = 425 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||| ||||||||||||||||| Sbjct: 359 cggctgcagctgcagctgctgctgc 335
>gb|AY060253.1| Drosophila melanogaster GH07919 full length cDNA Length = 2438 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 1483 ctcctgctgcagctgcagctgctgctgca 1455
>gb|AF342811.1|AF342811 Bos taurus mannose-6-phosphate/insulin-like growth factor II receptor (m6p/igf2r) mRNA, complete cds Length = 9075 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||| ||||| ||||||||||||||||| Sbjct: 221 gctcctgctgcagctgcagctgctgctgc 249
>gb|S55886.1| Drosophila melanogaster RRM9 (rbp9) gene, complete cds Length = 11347 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 9301 ctcctgctgcagctgcagctgctgctgca 9273
>gb|BC062313.1| Homo sapiens myelin transcription factor 1, mRNA (cDNA clone MGC:71389 IMAGE:4301464), complete cds Length = 2077 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 1401 ggctgctgctgcagctgctgctgctgggg 1373
>dbj|AK078118.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330513G01 product:nemo like kinase, full insert sequence Length = 3602 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 519 ggctgcggctgcagctgctgc 499
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 tcaagggtggcgacgatgtcacgca 375 |||||||||||||||||||| |||| Sbjct: 483909 tcaagggtggcgacgatgtcgcgca 483933
>gb|AY550965.1| Sparus aurata ribosomal protein large P0-like protein mRNA, partial cds Length = 1024 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||| ||||||||||||| Sbjct: 939 cggctgcggctccagctgctgctgc 963
>ref|NM_174352.2| Bos taurus insulin-like growth factor 2 receptor (IGF2R), mRNA Length = 9075 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||| ||||| ||||||||||||||||| Sbjct: 221 gctcctgctgcagctgcagctgctgctgc 249
>dbj|AK041337.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630002L15 product:nemo like kinase, full insert sequence Length = 1876 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 477 ggctgcggctgcagctgctgc 457
>ref|NM_001027709.1| Caenorhabditis elegans TRAnsformer : XX animals transformed into males family member (tra-1) (tra-1) mRNA, complete cds Length = 3330 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 gctgcagctgctgctgcaggggctc 352 ||||| ||||||||||||||||||| Sbjct: 1807 gctgctgctgctgctgcaggggctc 1783
>gb|AC008362.5|AC008362 Drosophila melanogaster, chromosome 3R, region 90D-90E, BAC clone BACR01C15, complete sequence Length = 153048 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 36364 tgcggctgcagctgctgctgc 36344
>gb|AC008361.8|AC008361 Drosophila melanogaster, chromosome 3R, region 90D-90D, BAC clone BACR35E22, complete sequence Length = 177471 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 96919 tgcggctgcagctgctgctgc 96899
>gb|AF307337.1|AF307337 Homo sapiens ALPP, ALPPL2, ALPI, XCE, CHRND, and CHRNG genes, complete sequence Length = 210301 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||||||||||| ||||| ||||| Sbjct: 148515 gctccggctgcggctgcggctgcggctgc 148487
>gb|AC141000.7| Homo sapiens 3 BAC RP11-480C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175946 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 73734 gctgctgctgcagctgctgctgcag 73710
>gb|AC007085.7|AC007085 Drosophila melanogaster, chromosome 2R, region 44D2-44E1, BAC clone BACR21H10, complete sequence Length = 166867 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||| ||||||||||||||||| Sbjct: 61623 cggctgctgctgcagctgctgctgc 61647
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone BACR48P17, complete sequence Length = 176195 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 98606 cggctgcggctgctgctgctgctgc 98630
>gb|AC010747.10| Homo sapiens BAC clone RP11-555H9 from 2, complete sequence Length = 159512 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 74776 gctgcggctgcagctgcagctgcag 74800
>gb|AF083334.1|AF083334 Antheraea pernyi fibroin gene, complete cds Length = 9282 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 2414 gctgcagctgcagctgctgctgcag 2390 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 6611 gcggctgcagctgctgctgc 6592
>ref|XM_579421.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_019146 (LOC497833), mRNA Length = 12491 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 7476 gctgctgctgcagctgctgctgcag 7452
>ref|XM_219880.3| PREDICTED: Rattus norvegicus NK2 transcription factor related, locus 3 (Drosophila) (predicted) (Nkx2-3_predicted), mRNA Length = 1271 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 1026 cggctgcggctgcggctgctgctgc 1002
>gb|AC151826.8| Monodelphis domestica, clone XX-25F7, complete sequence Length = 152619 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 |||| |||||||||||||||||||| Sbjct: 9257 cggccgcggctgcagctgctgctgc 9281
>gb|AY186999.1| Drosophila virilis unc-5 (unc-5) gene, partial cds; and ap (ap), vlc (vlc), CG17337 (CG17337), and CG13533 (CG13533) genes, complete cds Length = 83253 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||| ||||||||||||||||| Sbjct: 60340 cggctgctgctgcagctgctgctgc 60364 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 10610 cggctgcggctgctgctgctgctgc 10634
>gb|AF170972.1|AF170972 Agelaius phoeniceus cosmid 10, complete sequence Length = 38786 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 gctgcagctgctgctgcaggg 348 ||||||||||||||||||||| Sbjct: 5699 gctgcagctgctgctgcaggg 5719
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 135685 cggctgcggctgccgctgctgctgc 135661
>gb|AF220068.1|AF220068 Drosophila melanogaster SKPC gene, complete cds Length = 7037 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 4873 cggctgcggctgctgctgctgctgc 4897
>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete sequences Length = 160456 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgc 344 |||||||||||||| || ||||||||||| Sbjct: 95410 gctccggctgcggccgccgctgctgctgc 95438
>dbj|AB020642.1| Homo sapiens mRNA for KIAA0835 protein, partial cds Length = 5533 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 2441 ggctgctgctgcagctgctgctgctgggg 2413
>emb|AJ310994.1|HVU310994 Hordeum vulgare lt101.1 gene for putative membrane protein Length = 2288 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 catgtcatttaatgacctctagtcc 64 ||||| ||||||||||||||||||| Sbjct: 1024 catgttatttaatgacctctagtcc 1048
>dbj|AK110470.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-H01, full insert sequence Length = 3020 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||| ||||||||||||||||| Sbjct: 558 cggctgctgctgcagctgctgctgc 534
>dbj|AK069442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025N13, full insert sequence Length = 3116 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 213 cggctgcggctgcggctgctgctgc 189 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctg 343 ||||||||||||| |||||||||| Sbjct: 207 cggctgcggctgctgctgctgctg 184
>gb|AF077857.1|AF077857 Bos taurus tie-2/tek receptor tyrosine kinase gene, promoter region and partial cds Length = 785 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||| |||||||||||||||| Sbjct: 426 ggctgctgctgctgctgctgctgcagggg 398
>emb|AL117202.1|CEY47D3A Caenorhabditis elegans YAC Y47D3A, complete sequence Length = 199814 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 gctgcagctgctgctgcaggggctc 352 ||||| ||||||||||||||||||| Sbjct: 39564 gctgctgctgctgctgcaggggctc 39588
>emb|AJ893552.1| Viverricula indica partial ar gene for androgen receptor, exon 1 Length = 1422 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 174 cggctgcggctgctgctgctgctgc 150
>gb|AY104321.1| Zea mays PCO083972 mRNA sequence Length = 1138 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 143 cggctgcggctgctgctgctgctgc 119
>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones DS02190 and DS00906, complete sequence Length = 163403 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 66542 ctcctgctgcagctgcagctgctgctgca 66570
>gb|U86410.1|GGU86410 Gallus gallus non-receptor protein tyrosine phosphatase (PTP1B) mRNA, complete cds Length = 1926 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||||||| ||||| ||||||||||||| Sbjct: 54 gctccggctccggctccagctgctgctgc 26
>emb|Y16563.1|RNY16563 Rattus norvegicus mRNA for brain-specific synapse-associated protein, Bassoon Length = 12507 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 7479 gctgctgctgcagctgctgctgcag 7455
>gb|AE003720.3| Drosophila melanogaster chromosome 3R, section 58 of 118 of the complete sequence Length = 228842 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 81795 tgcggctgcagctgctgctgc 81775
>gb|AE003836.4| Drosophila melanogaster chromosome 2R, section 14 of 73 of the complete sequence Length = 259383 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||| ||||||||||||||||| Sbjct: 84881 cggctgctgctgcagctgctgctgc 84905
>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete sequence Length = 314957 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 134158 ctcctgctgcagctgcagctgctgctgca 134130
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete sequence Length = 207432 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgc 344 ||||||||||||| ||||||||||| Sbjct: 118745 cggctgcggctgctgctgctgctgc 118769
>emb|Y18450.1|HSAP18450 Homo sapiens Bassoon (BSN) gene, exons 4 and 5 Length = 8193 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 6648 gctgctgctgcagctgctgctgcag 6624
>gb|AF052224.1|AF052224 Homo sapiens neuronal double zinc finger protein (ZNF231) mRNA, complete cds Length = 15964 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 7511 gctgctgctgcagctgctgctgcag 7487
>gb|BT001569.1| Drosophila melanogaster RE20544 full insert cDNA Length = 4538 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 3359 tgcggctgcagctgctgctgc 3339
>gb|AF052145.1|AF052145 Homo sapiens clone 24400 mRNA sequence Length = 1434 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||||||||| ||||||| Sbjct: 679 gctgcggctgcagctgcagctgcag 655
>gb|AF036332.1|AF036332 Mus musculus nemo-like kinase (Nlk) mRNA, complete cds Length = 2603 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 535 ggctgcggctgcagctgctgc 515
>gb|L04930.1|DRORBP9A Drosophila melanogaster RNA-binding protein gene fragment Length = 11347 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgca 345 |||| ||||| |||||||||||||||||| Sbjct: 9301 ctcctgctgcagctgcagctgctgctgca 9273
>gb|BC092249.1| Mus musculus ribosomal protein L14, mRNA (cDNA clone MGC:103098 IMAGE:5034997), complete cds Length = 764 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 457 tgcggctgcagctgctgctgc 477
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence Length = 227073 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 21036 tgcggctgcagctgctgctgc 21016
>gb|M93256.1|CELTRA1A Caenorhabditis elegans transformer protein (tra-1, expressed in embryo stage) mRNA, complete cds Length = 4697 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 gctgcagctgctgctgcaggggctc 352 ||||| ||||||||||||||||||| Sbjct: 1969 gctgctgctgctgctgcaggggctc 1945
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 ggccgggctcacctccaccaccagctccg 321 ||||||| |||||||| |||||||||||| Sbjct: 3042492 ggccggggtcacctcctccaccagctccg 3042520
>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete sequence Length = 132674 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctgc 341 ||||||||||||||||||||| Sbjct: 96316 ggctgcggctgcagctgctgc 96336
>gb|M96980.1|HUMMYT1A Homo sapiens myelin transcription factor 1 (MTF1) mRNA, 3' end Length = 2623 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgcagggg 349 |||||| ||||||||||||||||| |||| Sbjct: 889 ggctgctgctgcagctgctgctgctgggg 861
>emb|Z14974.1|DMCPO611G D.melanogaster Cpo 61.1 gene for couch potato protein Length = 4134 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgc 344 ||||||||||||||||||||| Sbjct: 3945 tgcggctgcagctgctgctgc 3925
>gb|J03527.1|BOVCMPR Bovine cation-independent mannose 6-phosphate receptor protein mRNA, complete cds Length = 7913 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 gctccggctgcggctgcagctgctgctgc 344 ||||| ||||| ||||||||||||||||| Sbjct: 221 gctcctgctgcagctgcagctgctgctgc 249
>gb|M92913.1|NEPFIBPR Nephila clavipes dragline silk fibroin (spidroin 2) mRNA, 3' end Length = 1981 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||| ||||||||||||| Sbjct: 1283 gctgcggctgcggctgctgctgcag 1259 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||| ||||||||||||| Sbjct: 1172 gctgcggctgcggctgctgctgcag 1148
>dbj|AB019785.1| Cynops pyrrhogaster CpEomesodermin mRNA, complete cds Length = 3038 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||||||||| ||||||||||||| Sbjct: 1793 gctgcggctgctgctgctgctgcag 1769
>dbj|AB007894.1| Homo sapiens KIAA0434 mRNA, partial cds Length = 5650 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcag 346 ||||| ||||||||||||||||||| Sbjct: 332 gctgctgctgcagctgctgctgcag 308
>emb|AL773583.9| Mouse DNA sequence from clone RP23-384O2 on chromosome X, complete sequence Length = 131402 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 ttaagttggaactagaaaaga 127 ||||||||||||||||||||| Sbjct: 93191 ttaagttggaactagaaaaga 93171
>ref|NM_179082.1| Arabidopsis thaliana unknown protein AT4G20300 transcript variant AT4G20300.1 mRNA, complete cds Length = 1559 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cacctccaccaccagctccg 321 |||||||||||||||||||| Sbjct: 801 cacctccaccaccagctccg 820
>ref|NM_118149.3| Arabidopsis thaliana unknown protein AT4G20300 transcript variant AT4G20300.2 mRNA, complete cds Length = 1782 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 cacctccaccaccagctccg 321 |||||||||||||||||||| Sbjct: 824 cacctccaccaccagctccg 843
>gb|AC137127.11| Mus musculus chromosome 9, clone RP24-264F17, complete sequence Length = 181842 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 149168 gcggctgcagctgctgctgc 149149
>gb|DQ157462.1| Oryza sativa (indica cultivar-group) strain Suphan Buri 1 Hd3a gene, complete cds Length = 3836 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgctgca 345 ||||| |||||||||||||||||| Sbjct: 150 gctgctgctgcagctgctgctgca 173
>gb|DQ157461.1| Oryza sativa (indica cultivar-group) strain KDML 105 Hd3a gene, complete cds Length = 3836 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgctgca 345 ||||| |||||||||||||||||| Sbjct: 150 gctgctgctgcagctgctgctgca 173
>gb|AC151752.1| Ornithorhynchus anatinus chromosome UNK clone OABb-503A1, complete sequence Length = 132108 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggct 351 ||||||| ||||| ||||||||||| |||||| Sbjct: 58228 cggctgctgctgctgctgctgctgcgggggct 58197
>ref|XM_531501.1| PREDICTED: Pan troglodytes LOC474051 (LOC474051), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gctgctgctgcaggggctca 353 |||||||||||||||||||| Sbjct: 390 gctgctgctgcaggggctca 409
>ref|XM_525315.1| PREDICTED: Pan troglodytes similar to disks large-associated protein 4 isoform a; disks large associated protein 4; SAP90/PSD-95-associated protein 4; PSD-95/SAP90 binding protein 4 (LOC469930), mRNA Length = 4473 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctg 343 |||||||||||||||||||| Sbjct: 410 tgcggctgcagctgctgctg 391
>ref|XM_522693.1| PREDICTED: Pan troglodytes LOC467295 (LOC467295), mRNA Length = 3180 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcagg 347 |||| |||||||| |||||||||||||| Sbjct: 2703 cggcggcggctgctgctgctgctgcagg 2676
>ref|XM_468173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1880 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 1196 ggctgcggctgcggctgctgctgc 1173 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctg 343 ||||||||||||| |||||||||| Sbjct: 1191 cggctgcggctgctgctgctgctg 1168 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 319 ccggctgcggctgcagctgctgctgcag 346 |||||||| ||||| ||||||||||||| Sbjct: 172 ccggctgctgctgctgctgctgctgcag 145
>ref|NM_001030678.1| Gallus gallus pre-B-cell leukemia transcription factor 3 (PBX3), mRNA Length = 2949 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 569 gctgcggctgcagctgctgc 550
>ref|XM_527490.1| PREDICTED: Pan troglodytes similar to solute carrier family 35, member F1; DUF6 containing protein (LOC472111), mRNA Length = 1392 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 40 gcggctgcagctgctgctgc 21
>ref|XM_518378.1| PREDICTED: Pan troglodytes similar to Pre-B-cell leukemia transcription factor-2 (Homeobox protein PBX2) (G17 protein) (LOC462585), mRNA Length = 3345 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 377 gcggctgcagctgctgctgc 358
>ref|XM_530725.1| PREDICTED: Pan troglodytes LOC461314 (LOC461314), mRNA Length = 889 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctg 340 |||||||||||||||||||| Sbjct: 386 ggctgcggctgcagctgctg 405
>ref|XM_479409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3127 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 380 ggctgcggctgcggctgctgctgc 357
>gb|BC107582.1| Homo sapiens TPA regulated locus, mRNA (cDNA clone MGC:104345 IMAGE:4691718), complete cds Length = 1961 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctg 340 |||||||||||||||||||| Sbjct: 407 ggctgcggctgcagctgctg 388
>ref|NM_001034554.1| Bos taurus similar to proline-rich protein 3 (MGC128443), mRNA Length = 1784 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||| ||||||||||||||||| Sbjct: 75 ggctgctgctgcagctgctgctgc 52
>ref|XM_472289.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2190 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 494 gcggctgcagctgctgctgc 475
>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence Length = 223764 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggct 351 ||||||||||||| ||||| ||||||| |||| Sbjct: 200656 cggctgcggctgctgctgcagctgcagcggct 200625
>ref|NM_002586.3| Homo sapiens pre-B-cell leukemia transcription factor 2 (PBX2), mRNA Length = 3210 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 699 gcggctgcagctgctgctgc 680
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcagggg 349 ||||| ||||| |||||||||||||||| Sbjct: 258 gctgctgctgctgctgctgctgcagggg 231
>gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1537_B05, complete sequence Length = 129890 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcagggg 349 ||||| ||||| |||||||||||||||| Sbjct: 85764 gctgctgctgctgctgctgctgcagggg 85737
>ref|NM_131447.1| Danio rerio pre-B-cell leukemia transcription factor 4 (pbx4), mRNA Length = 2854 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 ctccggctgcggctgcagctgctgctgc 344 |||| ||||| ||||||||||||||||| Sbjct: 1345 ctccagctgctgctgcagctgctgctgc 1318
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10, complete sequence Length = 181130 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ccacgccgtcaccaccaccg 284 |||||||||||||||||||| Sbjct: 91641 ccacgccgtcaccaccaccg 91622
>ref|NM_200114.2| Danio rerio zgc:77730 (zgc:77730), mRNA Length = 1708 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 76 gcggctgcagctgctgctgc 95
>gb|AF146793.2| Mus musculus Neuromedin U precursor (Nmu) gene, partial cds; PDCL2 (Pdcl2) gene, partial cds; CLOCK (Clock) gene, complete cds; TPARDL (Tpardl) gene, complete cds; and SRD5A2L (Srd5a2l) gene, complete cds Length = 204618 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctg 340 |||||||||||||||||||| Sbjct: 154441 ggctgcggctgcagctgctg 154460
>gb|U89336.1|HSMHC3W5A Homo sapiens HLA class III region containing NOTCH4 gene, partial sequence, homeobox PBX2 (HPBX) gene, receptor for advanced glycosylation end products (RAGE) gene, complete cds, and 6 unidentified cds, complete sequence Length = 62944 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 14876 gcggctgcagctgctgctgc 14857
>gb|AY023533.1| Oryza sativa microsatellite MRG5858 containing (TGC)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgctgcagggg 349 ||||| ||||| |||||||||||||||| Sbjct: 105 gctgctgctgctgctgctgctgcagggg 132
>gb|BC065442.1| Danio rerio zgc:77730, mRNA (cDNA clone MGC:77730 IMAGE:7000723), complete cds Length = 1708 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 76 gcggctgcagctgctgctgc 95
>gb|BC046091.1| Danio rerio zgc:77730, mRNA (cDNA clone MGC:56346 IMAGE:5604093), complete cds Length = 1440 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 110 gcggctgcagctgctgctgc 129
>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence Length = 195563 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 48472 gcggctgcagctgctgctgc 48453
>gb|AC024753.1| Caenorhabditis elegans cosmid Y23H5B, complete sequence Length = 69663 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 313 ccagctccggctgcggctgcagctgctg 340 |||||||||||| ||||| ||||||||| Sbjct: 61566 ccagctccggctccggctccagctgctg 61593
>gb|BC076651.1| Xenopus tropicalis MGC79483 protein, mRNA (cDNA clone MGC:79483 IMAGE:6976579), complete cds Length = 2697 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 713 ggctgcggctgcggctgctgctgc 690
>gb|BC082261.1| Homo sapiens pre-B-cell leukemia transcription factor 2, mRNA (cDNA clone MGC:99466 IMAGE:6425904), complete cds Length = 2174 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 451 gcggctgcagctgctgctgc 432
>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence Length = 198590 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgcaggggct 351 ||||||||||||| ||||| ||||||| |||| Sbjct: 153923 cggctgcggctgctgctgcagctgcagcggct 153954
>gb|AY576688.1| Homo sapiens clone VLL transforming growth factor-beta 1 gene, exon 1 and partial cds Length = 237 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 69 ggctgcggctgctgctgctgctgc 92
>gb|AY601075.1| Dunaliella salina phytoene synthase mRNA, complete cds Length = 1260 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gctgcagctgctgctgcagg 347 |||||||||||||||||||| Sbjct: 211 gctgcagctgctgctgcagg 192
>gb|AY547325.1| Dunaliella salina phytoene synthase gene, complete cds Length = 2983 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gctgcagctgctgctgcagg 347 |||||||||||||||||||| Sbjct: 211 gctgcagctgctgctgcagg 192
>ref|XM_592363.2| PREDICTED: Bos taurus similar to epidermal growth factor receptor pathway substrate 8-like protein 1 isoform a (LOC514504), mRNA Length = 2549 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cctccaccaccagctccggc 323 |||||||||||||||||||| Sbjct: 1726 cctccaccaccagctccggc 1745
>gb|AC009905.12| Drosophila melanogaster clone BACR21E16, complete sequence Length = 170662 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 tgcggctgcagctgctgctgcaggggct 351 |||||||| |||||||||||||||||| Sbjct: 127787 tgcggctgttgctgctgctgcaggggct 127760
>gb|AE008576.1| Rickettsia conorii str. Malish 7, section 8 of 114 of the complete genome Length = 11731 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ttttaagttggaactagaaa 124 |||||||||||||||||||| Sbjct: 11524 ttttaagttggaactagaaa 11543
>ref|XM_874693.1| PREDICTED: Bos taurus similar to angiomotin, transcript variant 2 (LOC535509), mRNA Length = 3309 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccagctccggctgcggctgc 332 |||||||||||||||||||| Sbjct: 3070 ccagctccggctgcggctgc 3089
>ref|XM_615613.2| PREDICTED: Bos taurus similar to angiomotin, transcript variant 1 (LOC535509), mRNA Length = 3836 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccagctccggctgcggctgc 332 |||||||||||||||||||| Sbjct: 3597 ccagctccggctgcggctgc 3616
>gb|BC079610.1| Mus musculus paired-like homeobox 2b, mRNA (cDNA clone MGC:90726 IMAGE:30360139), complete cds Length = 2857 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgcaggggct 351 ||||||||||||| ||||| ||||||| |||| Sbjct: 907 cggctgcggctgctgctgcagctgcagcggct 938
>ref|XM_424154.1| PREDICTED: Gallus gallus similar to HMG domain protein HMGX2 (LOC426515), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 ctgcagctgctgctgcaggg 348 |||||||||||||||||||| Sbjct: 1269 ctgcagctgctgctgcaggg 1250
>ref|XM_414221.1| PREDICTED: Gallus gallus similar to expressed sequence AW413431 (LOC415862), mRNA Length = 4187 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gctgctgctgcaggggctca 353 |||||||||||||||||||| Sbjct: 3777 gctgctgctgcaggggctca 3796
>ref|NM_008173.2| Mus musculus nuclear receptor subfamily 3, group C, member 1 (Nr3c1), mRNA Length = 4963 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 370 ggctgcggctgctgctgctgctgc 347
>gb|AC147239.2| Mus musculus BAC clone RP23-386C10 from chromosome 5, complete sequence Length = 217470 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctg 340 |||||||||||||||||||| Sbjct: 146085 ggctgcggctgcagctgctg 146104
>gb|BC001180.1| Homo sapiens transforming growth factor, beta 1 (Camurati-Engelmann disease), mRNA (cDNA clone MGC:2323 IMAGE:3356605), complete cds Length = 1780 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 460 ggctgcggctgctgctgctgctgc 483
>ref|XM_611725.2| PREDICTED: Bos taurus similar to TPA regulated locus (LOC532600), mRNA Length = 1803 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctg 340 |||||||||||||||||||| Sbjct: 246 ggctgcggctgcagctgctg 227
>ref|NM_025974.1| Mus musculus ribosomal protein L14 (Rpl14), mRNA Length = 936 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 477 gcggctgcagctgctgctgc 496
>ref|NM_020601.1| Mus musculus transducin (beta)-like 1 X-linked (Tbl1x), mRNA Length = 2303 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 ||||| |||||||||||||||||| Sbjct: 558 ggctgtggctgcagctgctgctgc 535
>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete sequence Length = 181811 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 35837 ggctgcggctgctgctgctgctgc 35860
>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete sequence Length = 226099 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 tccaccaccagctccggctg 325 |||||||||||||||||||| Sbjct: 74742 tccaccaccagctccggctg 74761
>gb|AC183321.1| Ornithorhynchus anatinus BAC clone OABb-153H21 from chromosome unknown, complete sequence Length = 161060 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgcagggg 349 ||||| ||||| |||||||||||||||| Sbjct: 87468 gctgctgctgctgctgctgctgcagggg 87441
>gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, complete sequence Length = 186496 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 gctgcagctgctgctgcaggggct 351 ||||| |||||||||||||||||| Sbjct: 107359 gctgctgctgctgctgcaggggct 107382
>gb|AY059373.2| Homo sapiens transforming growth factor beta 1 (TGFB1) gene, partial cds Length = 231 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 69 ggctgcggctgctgctgctgctgc 92
>ref|XM_977862.1| PREDICTED: Mus musculus similar to RNA binding motif protein 24 (LOC380843), mRNA Length = 3090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 1228 gctgcggctgcagctgctgc 1247
>ref|XM_989352.1| PREDICTED: Mus musculus similar to RNA binding motif protein 24, transcript variant 1 (LOC666794), mRNA Length = 2281 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 419 gctgcggctgcagctgctgc 438
>ref|XM_989380.1| PREDICTED: Mus musculus similar to RNA binding motif protein 24, transcript variant 2 (LOC666794), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 646 gctgcggctgcagctgctgc 665
>ref|XM_989409.1| PREDICTED: Mus musculus similar to RNA binding motif protein 24, transcript variant 3 (LOC666794), mRNA Length = 3224 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 1362 gctgcggctgcagctgctgc 1381
>ref|XM_914231.2| PREDICTED: Mus musculus similar to RNA binding motif protein 24 (LOC638266), mRNA Length = 2739 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 877 gctgcggctgcagctgctgc 896
>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete sequence Length = 173527 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tccaccaccagctccggctg 325 |||||||||||||||||||| Sbjct: 3837 tccaccaccagctccggctg 3818
>ref|XM_755216.1| Ustilago maydis 521 hypothetical protein (UM04162.1) partial mRNA Length = 5145 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 2742 ggctgcggctgctgctgctgctgc 2719
>ref|XM_540368.2| PREDICTED: Canis familiaris similar to POU domain, class 6, transcription factor 2 (Retina-derived POU-domain factor-1) (RPF-1) (LOC483249), mRNA Length = 1869 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggct 351 ||||||||||||| ||||| ||||| |||||| Sbjct: 543 cggctgcggctgcggctgcggctgcgggggct 512
>gb|BC059215.1| Mus musculus transcriptional regulating factor 1, mRNA (cDNA clone MGC:66566 IMAGE:6412734), complete cds Length = 4555 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgctgca 345 ||||||||||| |||||||||||| Sbjct: 1531 gctgcggctgctgctgctgctgca 1508
>ref|XM_532375.2| PREDICTED: Canis familiaris similar to TPA regulated locus (LOC475144), mRNA Length = 1509 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctg 340 |||||||||||||||||||| Sbjct: 173 ggctgcggctgcagctgctg 154
>gb|AC124512.3| Mus musculus BAC clone RP23-444C17 from chromosome 18, complete sequence Length = 192528 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 178382 ggctgcggctgctgctgctgctgc 178405
>gb|BC008154.1| Mus musculus nuclear receptor subfamily 3, group C, member 1, mRNA (cDNA clone IMAGE:3584269), with apparent retained intron Length = 1813 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggctgcggctgcagctgctgctgc 344 |||||||||||| ||||||||||| Sbjct: 602 ggctgcggctgctgctgctgctgc 579
>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete sequence Length = 177414 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gctgcggctgcagctgctgc 341 |||||||||||||||||||| Sbjct: 27896 gctgcggctgcagctgctgc 27877
>gb|AC121577.3| Mus musculus BAC clone RP23-244N5 from 15, complete sequence Length = 200103 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 133572 gcggctgcagctgctgctgc 133553
>emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in linkage group 14, complete sequence Length = 189098 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcggctgcagctgctgctgc 344 |||||||||||||||||||| Sbjct: 64514 gcggctgcagctgctgctgc 64533
>ref|NM_008888.2| Mus musculus paired-like homeobox 2b (Phox2b), mRNA Length = 2857 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 320 cggctgcggctgcagctgctgctgcaggggct 351 ||||||||||||| ||||| ||||||| |||| Sbjct: 907 cggctgcggctgctgctgcagctgcagcggct 938
>emb|CR727246.2|CNS0GO38 Tetraodon nigroviridis full-length cDNA Length = 1461 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 gctgcagctgctgctgcaggggct 351 ||||||||||||||||||| |||| Sbjct: 753 gctgcagctgctgctgcagcggct 730
>ref|XM_860591.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1 (Activator protein 1) (AP1) (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A) (AH119), transcript variant 4 (LOC609429), mRNA Length = 1639 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 320 cggctgcggctgcagctgctgctgcaggggct 351 ||||||| ||||| ||||||||||| |||||| Sbjct: 1217 cggctgctgctgctgctgctgctgctggggct 1186 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,950,390 Number of Sequences: 3902068 Number of extensions: 4950390 Number of successful extensions: 152847 Number of sequences better than 10.0: 511 Number of HSP's better than 10.0 without gapping: 515 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149948 Number of HSP's gapped (non-prelim): 2823 length of query: 487 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 465 effective length of database: 17,147,199,772 effective search space: 7973447893980 effective search space used: 7973447893980 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)