Clone Name | rbah62f05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase ... | 248 | 2e-67 | 2 | PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6... | 48 | 2e-05 | 3 | PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase p... | 34 | 0.33 | 4 | PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.... | 31 | 2.2 | 5 | RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigment... | 30 | 3.7 |
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>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 248 bits (634), Expect(2) = 2e-67 Identities = 115/115 (100%), Positives = 115/115 (100%) Frame = -2 Query: 539 GHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDH 360 GHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDH Sbjct: 254 GHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDH 313 Query: 359 DYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 195 DYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS Sbjct: 314 DYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368 Score = 27.3 bits (59), Expect(2) = 2e-67 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -1 Query: 570 QRYRVDIAYFG 538 QRYRVDIAYFG Sbjct: 244 QRYRVDIAYFG 254
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 47.8 bits (112), Expect = 2e-05 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 10/104 (9%) Frame = -2 Query: 542 SGHVHNYERTCPLYQSQCVNA-----DKTHYSGTMNGTIFVVAGGGG-----SHLSSYTT 393 SGH+H YER PL + ++ + T+Y+ ++ G G S S Sbjct: 497 SGHIHWYERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIESHSEFSDGEG 556 Query: 392 AIPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 261 ++ YGF+KLT FN ++L +E ++ DG V DS T+ Sbjct: 557 LTNITALLDKVHYGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 33.9 bits (76), Expect = 0.33 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 9/95 (9%) Frame = -2 Query: 542 SGHVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSHLSSYTTAI-- 387 +GHVH YER+ + N +G + I++ G GG+ T + Sbjct: 354 AGHVHAYERS-----ERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQP 408 Query: 386 -PKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 285 PK+S FR+ +G L N + F + ++ DG Sbjct: 409 QPKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDG 443
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 9/95 (9%) Frame = -2 Query: 542 SGHVHNYERTCPLYQSQCVNADKTHYSGTM------NGTIFVVAGGGGSH---LSSYTTA 390 +GHVH YER+ + N +G + +++ G GG+ ++ T Sbjct: 348 AGHVHAYERS-----ERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEP 402 Query: 389 IPKWSIFRDHDYGFTKLTAFNHSSLLFEYMKSSDG 285 PK+S FR+ +G N + + + ++ DG Sbjct: 403 QPKYSAFREASFGHAIFDITNRTHAHYSWHRNQDG 437
>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2095 Score = 30.4 bits (67), Expect = 3.7 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%) Frame = -2 Query: 524 YERTCPLYQ--SQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 351 + ++ PL Q S VN ++ + G T G + T WS + + G Sbjct: 914 HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973 Query: 350 FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 171 + + N L + +S +G +YDS+ L +HD+C + S+ H Sbjct: 974 KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024 Query: 170 VNVMEGHPSNKIV 132 +++ + P K+V Sbjct: 1025 LSIEKSRPEVKLV 1037 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,015,896 Number of Sequences: 219361 Number of extensions: 1283822 Number of successful extensions: 3392 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3318 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3387 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)