ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for seri... 638 e-180
2ref|NM_185973.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.077
3gb|AY224473.1| Oryza sativa (japonica cultivar-group) isolate 29... 46 0.077
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.077
5dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.077
6gb|AY108013.1| Zea mays PCO089815 mRNA sequence 44 0.30
7gb|AC146525.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
8emb|AL512496.1|SPAC589 S.pombe chromosome I cosmid c589 42 1.2
9ref|NM_001019474.1| Schizosaccharomyces pombe 972h- hypothetical... 42 1.2
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
12gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
13gb|AY490796.1| Helianthus annuus clone Ha-NTIR11-3prime CC-NBS-L... 40 4.7
14gb|AY567487.2| Human Coronavirus NL63, complete genome 40 4.7
15gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete s... 40 4.7
16gb|AY490793.1| Helianthus annuus clone Ha-NTIR11g CC-NBS-LRR gen... 40 4.7
17gb|AC123547.15| Medicago truncatula clone mth2-26n6, complete se... 40 4.7
18emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on ch... 40 4.7
19emb|AL162720.8| Human DNA sequence from clone RP1-132N8 on chrom... 40 4.7
20emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 ... 40 4.7
21gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 4.7
22gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
23emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 i... 40 4.7
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
25gb|AC021200.7| Homo sapiens BAC clone RP11-62B4 from 4, complete... 40 4.7
26gb|AY697420.1| Human coronavirus NL63 strain Amsterdam 1 spike p... 40 4.7
27gb|AY902242.1| Human coronavirus NL63 isolate SWE 10614/2004 spi... 40 4.7
28gb|AC117516.5| Homo sapiens 3 BAC RP11-845C18 (Roswell Park Canc... 40 4.7
29gb|AC073409.8| Homo sapiens BAC clone RP11-17O9 from 2, complete... 40 4.7
30emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on ch... 40 4.7
31emb|BX530723.8| Zebrafish DNA sequence from clone DKEYP-119B4 in... 40 4.7
32gb|AY758301.1| Human coronavirus NL63 strain BE03-64880 spike pr... 40 4.7
33gb|AY758298.1| Human coronavirus NL63 strain BE03-21596 spike pr... 40 4.7
34gb|AY758297.1| Human coronavirus NL63 strain BE03-1153 spike pro... 40 4.7
35gb|AC115809.8| Mus musculus chromosome 8, clone RP23-416L3, comp... 40 4.7
36gb|AF091216.1|AF091216 Mus musculus Wrn protein (Wrn) gene, comp... 40 4.7
37gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
38emb|AL671215.4| Mouse DNA sequence from clone RP23-277C18 on chr... 40 4.7
39emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chr... 40 4.7 
>emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3
          Length = 1979

 Score =  638 bits (322), Expect = e-180
 Identities = 349/357 (97%), Gaps = 2/357 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    cattgtaacacatggnaggcgcagcatcctttggtaggcaccagtattgcaacatgccat 60
            ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1919 cattgtaacacatgg-aggcgcagcatcctttgg-aggcaccagtattgcaacatgccat 1862

                                                                        
Query: 61   tttggcatagatgttcatacttaacaaattacaccatacactttcctatctatatgaaag 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 tttggcatagatgttcatacttaacaaattacaccatacactttcctatctatatgaaag 1802

                                                                        
Query: 121  catttgctgacctgcagttacatggtctgcggagtgcatgggttgatgatgggtttctgt 180
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1801 catttgctgacctgcagttacatggcctgcggagtgcatgggttgatgatgggtttctgt 1742

                                                                        
Query: 181  atctaactttacttgattttgcttgtttcttgtactgaatcaaatgatacaacctgtgaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 atctaactttacttgattttgcttgtttcttgtactgaatcaaatgatacaacctgtgaa 1682

                                                                        
Query: 241  acctgctggtgtactatcttttantgtaaaaccttcttttcttttgctaancctgttnnc 300
            ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  |
Sbjct: 1681 acctgctggtgtactatcttttagtgtaaaaccttcttttcttttgctaatcctgttcgc 1622

                                                                     
Query: 301  attctttgcagtcagggagcgctttgcctgcgangaaattctggacaagcacaagcg 357
            ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1621 attctttgcagtcagggagcgctttgcctgcgaggaaattctggacaagcacaagcg 1565
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>ref|NM_185973.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 312  tcagggagcgctttgcctgcgangaaattctggacaagcacaagcg 357
            ||||| |||| ||||||| | | ||||| |||||||||||||||||
Sbjct: 1550 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcg 1505
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>gb|AY224473.1| Oryza sativa (japonica cultivar-group) isolate 29039 serine
            carboxypepsidase mRNA, partial cds
          Length = 1338

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 312  tcagggagcgctttgcctgcgangaaattctggacaagcacaagcg 357
            ||||| |||| ||||||| | | ||||| |||||||||||||||||
Sbjct: 1313 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcg 1268
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 312      tcagggagcgctttgcctgcgangaaattctggacaagcacaagcg 357
                ||||| |||| ||||||| | | ||||| |||||||||||||||||
Sbjct: 27585606 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcg 27585651
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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0047B07
          Length = 157797

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 312   tcagggagcgctttgcctgcgangaaattctggacaagcacaagcg 357
             ||||| |||| ||||||| | | ||||| |||||||||||||||||
Sbjct: 42599 tcaggtagcgttttgccttcaaggaaatactggacaagcacaagcg 42644
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>gb|AY108013.1| Zea mays PCO089815 mRNA sequence
          Length = 453

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 305 tttgcagtcagggagcgctttgcctgcgangaaattctggacaagcacaagcg 357
           ||||||| |||| |||| ||||||||| | ||||  |||||||||||| ||||
Sbjct: 312 tttgcagccaggaagcgttttgcctgcaaggaaaccctggacaagcacgagcg 260
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>gb|AC146525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0060D22 map near S6115, complete sequence
          Length = 139929

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   cttgtttcttgtactgaatca 222
             |||||||||||||||||||||
Sbjct: 27390 cttgtttcttgtactgaatca 27410
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>emb|AL512496.1|SPAC589 S.pombe chromosome I cosmid c589
          Length = 18342

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 265  tgtaaaaccttcttttctttt 285
            |||||||||||||||||||||
Sbjct: 3586 tgtaaaaccttcttttctttt 3606
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>ref|NM_001019474.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC589.02c),
            partial mRNA
          Length = 3672

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 265  tgtaaaaccttcttttctttt 285
            |||||||||||||||||||||
Sbjct: 1053 tgtaaaaccttcttttctttt 1033
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 202      cttgtttcttgtactgaatca 222
                |||||||||||||||||||||
Sbjct: 12348107 cttgtttcttgtactgaatca 12348087
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 202      cttgtttcttgtactgaatca 222
                |||||||||||||||||||||
Sbjct: 12427414 cttgtttcttgtactgaatca 12427394
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>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0013J21, complete sequence
          Length = 155290

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   cttgattttgcttgtttctt 211
             ||||||||||||||||||||
Sbjct: 69068 cttgattttgcttgtttctt 69049
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>gb|AY490796.1| Helianthus annuus clone Ha-NTIR11-3prime CC-NBS-LRR-like protein
           mRNA, partial cds
          Length = 2791

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 114 atgaaagcatttgctgacctgcag 137
           ||||| ||||||||||||||||||
Sbjct: 862 atgaaggcatttgctgacctgcag 885
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>gb|AY567487.2| Human Coronavirus NL63, complete genome
          Length = 27553

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 185   aactttacttgattttgcttgttt 208
             |||||| |||||||||||||||||
Sbjct: 20476 aacttttcttgattttgcttgttt 20499
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>gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete sequence
          Length = 157383

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 112   atatgaaagcatttgctgacctgcagttacat 143
             ||||||||||||||||||| || || ||||||
Sbjct: 83643 atatgaaagcatttgctgagctacaattacat 83674
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>gb|AY490793.1| Helianthus annuus clone Ha-NTIR11g CC-NBS-LRR gene, complete cds
          Length = 7362

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 114  atgaaagcatttgctgacctgcag 137
            ||||| ||||||||||||||||||
Sbjct: 3844 atgaaggcatttgctgacctgcag 3867
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>gb|AC123547.15| Medicago truncatula clone mth2-26n6, complete sequence
          Length = 111995

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   gtaaaaccttcttttctttt 285
             ||||||||||||||||||||
Sbjct: 74096 gtaaaaccttcttttctttt 74115
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>emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on chromosome 10 Contains the
              gene for  Hermansky-Pudlak syndrome-6 protein (HPS6), two
              pseudogenes for  transcription elongation factor B (SIII),
              polypeptide 1, the LDB1 gene for LIM domain binding 1, a
              novel gene (KIAA0595), the NOLC1 gene for nucleolar and
              coiled-body phosphoprotein 1 and five CpG islands, complete
              sequence
          Length = 158434

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tgcaacatgccattttggca 67
              ||||||||||||||||||||
Sbjct: 109835 tgcaacatgccattttggca 109854
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>emb|AL162720.8| Human DNA sequence from clone RP1-132N8 on chromosome 6 Contains a
             pseudogene of the likely ortholog of mouse suppressors of
             cytokine signalling 5 (SOCS5, CIS6, CISH6, KIAA0761),
             complete sequence
          Length = 57355

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   tgattttgcttgtttcttgt 213
             ||||||||||||||||||||
Sbjct: 28712 tgattttgcttgtttcttgt 28731
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>emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 on chromosome 20q11.2 Contains
             a novel gene, complete sequence
          Length = 161888

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   tctaactttacttgattttgcttg 205
             ||||||||||||||||| ||||||
Sbjct: 23159 tctaactttacttgattctgcttg 23182
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ttacttgattttgcttgttt 208
              ||||||||||||||||||||
Sbjct: 487174 ttacttgattttgcttgttt 487155
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     cttgattttgcttgtttctt 211
               ||||||||||||||||||||
Sbjct: 2090928 cttgattttgcttgtttctt 2090909
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>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20,
            complete sequence
          Length = 151560

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 214  actgaatcaaatgatacaacctgt 237
            |||||| |||||||||||||||||
Sbjct: 7377 actgaaccaaatgatacaacctgt 7400
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     cttgattttgcttgtttctt 211
               ||||||||||||||||||||
Sbjct: 2090928 cttgattttgcttgtttctt 2090909
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>gb|AC021200.7| Homo sapiens BAC clone RP11-62B4 from 4, complete sequence
          Length = 154690

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   taaaaccttcttttcttttgctaa 290
             |||||| |||||||||||||||||
Sbjct: 31833 taaaactttcttttcttttgctaa 31856
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>gb|AY697420.1| Human coronavirus NL63 strain Amsterdam 1 spike protein (S) mRNA,
           partial cds
          Length = 287

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 aactttacttgattttgcttgttt 208
           |||||| |||||||||||||||||
Sbjct: 73  aacttttcttgattttgcttgttt 96
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>gb|AY902242.1| Human coronavirus NL63 isolate SWE 10614/2004 spike protein gene,
           partial cds
          Length = 586

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 aactttacttgattttgcttgttt 208
           |||||| |||||||||||||||||
Sbjct: 43  aacttttcttgattttgcttgttt 66
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>gb|AC117516.5| Homo sapiens 3 BAC RP11-845C18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172997

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   aaccttcttttcttttgcta 289
             ||||||||||||||||||||
Sbjct: 54614 aaccttcttttcttttgcta 54633
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>gb|AC073409.8| Homo sapiens BAC clone RP11-17O9 from 2, complete sequence
          Length = 180903

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     attttggcatagatgttcat 78
              ||||||||||||||||||||
Sbjct: 100998 attttggcatagatgttcat 100979
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>emb|AL672110.10| Mouse DNA sequence from clone RP23-338D24 on chromosome X, complete
             sequence
          Length = 167407

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cattttggcatagatgttca 77
             ||||||||||||||||||||
Sbjct: 13712 cattttggcatagatgttca 13693
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>emb|BX530723.8| Zebrafish DNA sequence from clone DKEYP-119B4 in linkage group 20,
             complete sequence
          Length = 119735

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   actgaatcaaatgatacaacctgt 237
             |||||| |||||||||||||||||
Sbjct: 93249 actgaaccaaatgatacaacctgt 93272
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>gb|AY758301.1| Human coronavirus NL63 strain BE03-64880 spike protein gene,
           partial cds
          Length = 614

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 aactttacttgattttgcttgttt 208
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63
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>gb|AY758298.1| Human coronavirus NL63 strain BE03-21596 spike protein gene,
           partial cds
          Length = 614

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 aactttacttgattttgcttgttt 208
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63
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>gb|AY758297.1| Human coronavirus NL63 strain BE03-1153 spike protein gene, partial
           cds
          Length = 614

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 aactttacttgattttgcttgttt 208
           |||||| |||||||||||||||||
Sbjct: 40  aacttttcttgattttgcttgttt 63
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>gb|AC115809.8| Mus musculus chromosome 8, clone RP23-416L3, complete sequence
          Length = 193884

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 258    cttttantgtaaaaccttctttt 280
              |||||| ||||||||||||||||
Sbjct: 102292 cttttagtgtaaaaccttctttt 102270
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>gb|AF091216.1|AF091216 Mus musculus Wrn protein (Wrn) gene, complete cds
          Length = 97348

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 258  cttttantgtaaaaccttctttt 280
            |||||| ||||||||||||||||
Sbjct: 3759 cttttagtgtaaaaccttctttt 3737
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     cttgattttgcttgtttctt 211
               ||||||||||||||||||||
Sbjct: 2090879 cttgattttgcttgtttctt 2090860
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>emb|AL671215.4| Mouse DNA sequence from clone RP23-277C18 on chromosome X, complete
              sequence
          Length = 182633

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    gtcagggagcgctttgcctg 330
              ||||||||||||||||||||
Sbjct: 175316 gtcagggagcgctttgcctg 175335
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>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete
             sequence
          Length = 160615

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   taaaaccttcttttcttttgctaa 290
             ||||| ||||||||||||||||||
Sbjct: 74487 taaaaacttcttttcttttgctaa 74510


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,799,938
Number of Sequences: 3902068
Number of extensions: 3799938
Number of successful extensions: 73208
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72898
Number of HSP's gapped (non-prelim): 308
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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