Clone Name | rbah61p20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | STT7_ARATH (Q9S713) Serine/threonine-protein kinase SNT7, chloro... | 57 | 1e-08 | 2 | DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.... | 30 | 2.0 |
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>STT7_ARATH (Q9S713) Serine/threonine-protein kinase SNT7, chloroplast| precursor (EC 2.7.11.1) (Stt7 homolog) Length = 562 Score = 57.0 bits (136), Expect = 1e-08 Identities = 22/42 (52%), Positives = 32/42 (76%) Frame = -2 Query: 335 RNVLASXLRVXRKXVRTISESMDELXSQRXSIWWXRWIPKXE 210 RN LAS LR+ RK V+T++E++DE+ R ++WW RWIP+ E Sbjct: 521 RNALASALRLQRKLVKTVTETIDEISDGRKTVWWNRWIPREE 562
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = -3 Query: 145 GNDISHLLLSTAGEGEVVSTYLSMGKHYDKYTYIWI-YGMKK 23 G ++ H++ + A EG++ S Y+ K YD YT + + GM K Sbjct: 488 GVEVRHIVGAIANEGDINSRYIGHIKLYDDYTTVELPQGMPK 529 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,327,304 Number of Sequences: 219361 Number of extensions: 584342 Number of successful extensions: 1216 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1216 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)