>gb|AC102543.9| Mus musculus chromosome 14, clone RP23-112K14, complete sequence
          Length = 214356

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 152  accactaagaacatcaacatg 172
            |||||||||||||||||||||
Sbjct: 2228 accactaagaacatcaacatg 2248

>gb|AC102542.8| Mus musculus, clone RP23-110O23, complete sequence
          Length = 270695

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   accactaagaacatcaacatg 172
             |||||||||||||||||||||
Sbjct: 25912 accactaagaacatcaacatg 25892

>emb|AL355498.10| Human DNA sequence from clone RP11-112L15 on chromosome 6 Contains a
             heparan sulfate (glucosamine) 3-O-sulfotransferase 1
             (HS3ST1) pseudogene, a putative novel gene, a laminin
             receptor  1 (LAMR1) pseudogene and two putative novel
             genes, complete sequence
          Length = 165549

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 133   aaaatcttcagagatgatcaccactaagaacat 165
             ||||||||||||||  |||| ||||||||||||
Sbjct: 58603 aaaatcttcagagagaatcaacactaagaacat 58635

>emb|AL049498.1|SPCC645 S.pombe chromosome III cosmid c645
          Length = 36736

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 332   gccaataggagtcctaggaga 352
             |||||||||||||||||||||
Sbjct: 31655 gccaataggagtcctaggaga 31635

>gb|AC010715.6| Drosophila melanogaster 3L BAC RP98-9G21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 421   gatacacaatgccaaaacttt 441
             |||||||||||||||||||||
Sbjct: 36657 gatacacaatgccaaaacttt 36637

>ref|NM_001023112.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC645.13),
           partial mRNA
          Length = 2166

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 332 gccaataggagtcctaggaga 352
           |||||||||||||||||||||
Sbjct: 456 gccaataggagtcctaggaga 436

>gb|AF127577.2|AF127577 Homo sapiens clone PAC 270M7 chromosome 21 map 21q11.2, complete sequence
          Length = 168153

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 393    tccgcgttagtttgctgagga 413
              |||||||||||||||||||||
Sbjct: 104951 tccgcgttagtttgctgagga 104931

>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 393   tccgcgttagtttgctgagga 413
             |||||||||||||||||||||
Sbjct: 24887 tccgcgttagtttgctgagga 24867

>gb|AE003564.3| Drosophila melanogaster chromosome 3L, section 21 of 83 of the complete
              sequence
          Length = 315944

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 421    gatacacaatgccaaaacttt 441
              |||||||||||||||||||||
Sbjct: 301121 gatacacaatgccaaaacttt 301101

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 278     ttcatttgccagcttgatcctgatg 302
               |||||||||||||||||||| ||||
Sbjct: 1869382 ttcatttgccagcttgatccggatg 1869406

>dbj|AB027885.1| Schizosaccharomyces pombe gene for Hypothetical nuclear protein,
           partial cds, clone:TA40
          Length = 442

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 332 gccaataggagtcctaggaga 352
           |||||||||||||||||||||
Sbjct: 300 gccaataggagtcctaggaga 280

>dbj|AB027953.1| Schizosaccharomyces pombe gene for Hypothetical nuclear protein,
           partial cds, clone:TB58
          Length = 310

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 332 gccaataggagtcctaggaga 352
           |||||||||||||||||||||
Sbjct: 168 gccaataggagtcctaggaga 148

>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
             complete sequence
          Length = 121466

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aagctaaacaaacactaaaa 109
             ||||||||||||||||||||
Sbjct: 52075 aagctaaacaaacactaaaa 52094

>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute
           (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 184967

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 434 aaaacttttgaagtcaatac 453
           ||||||||||||||||||||
Sbjct: 631 aaaacttttgaagtcaatac 650

>gb|AY584237.1| Serratia marcescens carbapenem-hydrolyzing beta-lactamase SME-3
           gene, complete cds
          Length = 1138

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  aaagctaaacaaacactaaa 108
           ||||||||||||||||||||
Sbjct: 182 aaagctaaacaaacactaaa 163

>emb|AL583850.5| Human DNA sequence from clone RP11-430G6 on chromosome 1 Contains the
              RGS4 gene for regulator of G-protein signalling 4 and the
              3' end of the RGS5 gene for regulator of G-protein
              signalling 5, complete sequence
          Length = 165329

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    ccgcgttagtttgctgagga 413
              ||||||||||||||||||||
Sbjct: 127790 ccgcgttagtttgctgagga 127771

>emb|AL357894.6| Human DNA sequence from clone RP11-576P23 on chromosome Xp11.21-11.23
             Contains a novel gene and a CpG island, complete sequence
          Length = 154847

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 94    taaacaaacactaaaactatacaa 117
             ||||||||||| ||||||||||||
Sbjct: 12293 taaacaaacacaaaaactatacaa 12316

>emb|Z30237.1|SMBPLRA Serratia marcescens smeR and sme1 genes for lysR-type proteins
          Length = 1499

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  aaagctaaacaaacactaaa 108
           ||||||||||||||||||||
Sbjct: 37  aaagctaaacaaacactaaa 56

>emb|Z28968.1|SMSME1 S.marcescens Sme-1 gene for Sme-1 carbapenem hydrolysing
           beta-lactamase
          Length = 1211

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  aaagctaaacaaacactaaa 108
           ||||||||||||||||||||
Sbjct: 186 aaagctaaacaaacactaaa 167

>gb|AC109489.3| Homo sapiens chromosome 5 clone RP11-63G23, complete sequence
          Length = 148131

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   ccgcgttagtttgctgagga 413
             ||||||||||||||||||||
Sbjct: 15779 ccgcgttagtttgctgagga 15798

>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence
          Length = 190848

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    ccgcgttagtttgctgagga 413
              ||||||||||||||||||||
Sbjct: 165887 ccgcgttagtttgctgagga 165906

>gb|AC095058.3| Homo sapiens BAC clone RP11-416A5 from 4, complete sequence
          Length = 172472

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    aaacactaaaactatacaat 118
             ||||||||||||||||||||
Sbjct: 12645 aaacactaaaactatacaat 12626

>gb|AC097507.2| Homo sapiens BAC clone RP11-371E22 from 4, complete sequence
          Length = 167032

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aaacaaacactaaaactata 114
             ||||||||||||||||||||
Sbjct: 23525 aaacaaacactaaaactata 23506

>gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, complete sequence
          Length = 142517

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   ccgcgttagtttgctgagga 413
             ||||||||||||||||||||
Sbjct: 49476 ccgcgttagtttgctgagga 49495

>gb|AC010493.6|AC010493 Homo sapiens chromosome 5 clone CTD-2347I17, complete sequence
          Length = 93862

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   ccgcgttagtttgctgagga 413
             ||||||||||||||||||||
Sbjct: 60776 ccgcgttagtttgctgagga 60757

>gb|AC155833.10| Mus musculus 10 BAC RP24-405O10 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 176338

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 434    aaaacttttgaagtcaatac 453
              ||||||||||||||||||||
Sbjct: 175493 aaaacttttgaagtcaatac 175512

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 90       aagctaaacaaacactaaaa 109
                ||||||||||||||||||||
Sbjct: 24165837 aagctaaacaaacactaaaa 24165856

>gb|AC092574.2| Homo sapiens BAC clone RP11-2H3 from 4, complete sequence
          Length = 144117

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aaacaaacactaaaactata 114
             ||||||||||||||||||||
Sbjct: 20700 aaacaaacactaaaactata 20681

>gb|AC093765.3| Homo sapiens BAC clone RP11-97F8 from 4, complete sequence
          Length = 177059

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  ccagtgcttcatatacatca 372
            ||||||||||||||||||||
Sbjct: 6751 ccagtgcttcatatacatca 6732

>gb|AF275256.1|AF275256 Serratia marcescens carbapenem-hydrolyzing class A beta-lactamase
           Sme-2 gene, complete cds
          Length = 885

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  aaagctaaacaaacactaaa 108
           ||||||||||||||||||||
Sbjct: 59  aaagctaaacaaacactaaa 40

>gb|AC124802.11| Homo sapiens chromosome 17, clone RP11-278N14, complete sequence
          Length = 62029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   ccgcgttagtttgctgagga 413
             ||||||||||||||||||||
Sbjct: 36998 ccgcgttagtttgctgagga 37017

>gb|U60295.1|SMU60295 Serratia marcescens carbapenem-hydrolyzing beta-lactamase (sme-2)
           gene, complete cds
          Length = 885

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  aaagctaaacaaacactaaa 108
           ||||||||||||||||||||
Sbjct: 59  aaagctaaacaaacactaaa 40

>gb|AC118599.24| Mus musculus chromosome 5, clone RP23-459G5, complete sequence
          Length = 194003

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  tgggctaaaataaagttcat 282
            ||||||||||||||||||||
Sbjct: 7489 tgggctaaaataaagttcat 7470


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,462,702
Number of Sequences: 3902068
Number of extensions: 4462702
Number of successful extensions: 101439
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101344
Number of HSP's gapped (non-prelim): 95
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)