Clone Name	rbah61p07
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY107758.1| Zea mays PCO143163 mRNA sequence	266	7e-68
2	ref|XM_481609.1| Oryza sativa (japonica cultivar-group), mRNA	258	2e-65
3	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	258	2e-65
4	dbj|AP005493.3| Oryza sativa (japonica cultivar-group) genomic D...	258	2e-65
5	dbj|AK060470.1| Oryza sativa (japonica cultivar-group) cDNA clon...	258	2e-65
6	ref|NM_189287.1| Oryza sativa (japonica cultivar-group), predic...	168	1e-38
7	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	168	1e-38
8	dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic D...	168	1e-38
9	gb|AF021220.1|AF021220 Nicotiana tabacum cation-chloride co-tran...	50	0.008
10	gb|AF227153.1| Crotalus atrox serine protease catroxase I precur...	46	0.13
11	ref|NM_179401.1| Arabidopsis thaliana CCC1; cation:chloride symp...	44	0.51
12	ref|NM_102781.2| Arabidopsis thaliana CCC1; cation:chloride symp...	44	0.51
13	ref|NM_179400.1| Arabidopsis thaliana CCC1; cation:chloride symp...	44	0.51
14	gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1...	44	0.51
15	emb|AM113986.1| Arabidopsis thaliana mRNA for cation chloride co...	44	0.51
16	gb|AC131989.8| Mus musculus chromosome 14, clone RP24-186N15, co...	42	2.0
17	ref|XM_606422.2| PREDICTED: Bos taurus similar to Potassium volt...	42	2.0
18	gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, comp...	42	2.0
19	gb|BC112873.1| Bos taurus cDNA clone MGC:137467 IMAGE:8175514, c...	42	2.0
20	gb|AC097659.3| Homo sapiens BAC clone RP11-408C24 from 4, comple...	42	2.0
21	dbj|AK032157.1| Mus musculus adult male olfactory brain cDNA, RI...	42	2.0
22	gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer...	42	2.0
23	ref|NM_105896.2| Arabidopsis thaliana P40; structural constituen...	40	7.9
24	ref|XM_519178.1| PREDICTED: Pan troglodytes similar to Heterogen...	40	7.9
25	emb|CR956426.6| Pig DNA sequence from clone CH242-42M23 on chrom...	40	7.9
26	gb|AC131751.2| Mus musculus BAC clone RP23-19P8 from 10, complet...	40	7.9
27	emb|AL590322.4| Human DNA sequence from clone RP11-536F2 on chro...	40	7.9
28	emb|AL354893.14| Human DNA sequence from clone RP11-80I15 on chr...	40	7.9
29	emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chr...	40	7.9
30	gb|BT000421.1| Arabidopsis thaliana putative 40S ribosomal prote...	40	7.9
31	emb|Y10379.1|ATRPP40 A.thaliana gene encoding ribosomal protein P40	40	7.9
32	emb|X89366.1|AT40KDAPR A.thaliana DNA for 40 kDa protein gene	40	7.9
33	emb|X69056.1|ATLRH A.thaliana mRNA for laminin receptor homologue	40	7.9
34	emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on ch...	40	7.9
35	gb|AY136324.1| Arabidopsis thaliana putative 40S ribosomal prote...	40	7.9
36	gb|AY114561.1| Arabidopsis thaliana putative 40S ribosomal prote...	40	7.9
37	gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete seq...	40	7.9
38	gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map...	40	7.9
39	gb|AY079041.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, co...	40	7.9
40	gb|AY065096.1| Arabidopsis thaliana putative 40S ribosomal prote...	40	7.9
41	gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome	40	7.9
42	gb|AY058885.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, co...	40	7.9
43	gb|AY054211.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, co...	40	7.9
44	gb|AC153764.3| Loxodonta africana clone VMRC15-169D19, complete ...	40	7.9
45	emb|BX817196.1|CNS0AD2L Arabidopsis thaliana Full-length cDNA Co...	40	7.9
46	emb|BX816779.1|CNS0AD9Z Arabidopsis thaliana Full-length cDNA Co...	40	7.9
47	emb|BX815045.1|CNS0ACSY Arabidopsis thaliana Full-length cDNA Co...	40	7.9
48	gb|M55071.1|BOVHLADRB2 Bovine MHC DR-beta pseudogene, exons n+1 ...	40	7.9
49	emb|BX814998.1|CNS0AAO4 Arabidopsis thaliana Full-length cDNA Co...	40	7.9
50	gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10...	40	7.9
51	gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome...	40	7.9
52	gb|AY087976.1| Arabidopsis thaliana clone 40091 mRNA, complete s...	40	7.9
53	gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosom...	40	7.9
54	emb|CR962131.2| Medicago truncatula chromosome 5 clone mth2-69b1...	40	7.9
55	gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome	40	7.9
56	emb|AL844865.6| Mouse DNA sequence from clone RP23-350L23 on chr...	40	7.9
57	gb|U01955.1|ATU01955 Arabidopsis thaliana Columbia laminin recep...	40	7.9

---

>gb|AY107758.1| Zea mays PCO143163 mRNA sequence
          Length = 1380

 Score =  266 bits (134), Expect = 7e-68
 Identities = 212/238 (89%)
 Strand = Plus / Minus

                                                                       
Query: 276 aaaaatgtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctct 335
           ||||||||||||||||||||  |||||||||| ||||| |||||||||||||| ||||||
Sbjct: 967 aaaaatgtgacaacatctctcgtatatcccctaactattaacatgcgtgggacattctct 908

                                                                       
Query: 336 acaagcatatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggaggg 395
           ||||||| ||||||||||||||||||||| |||||||| || || || ||||| || || 
Sbjct: 907 acaagcaaatccatgtactccatgtagaaatatgcaggatgatttagtggtggtggtgga 848

                                                                       
Query: 396 aggctcaccagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttc 455
           |||||||| || || ||||||||||| ||||||| ||||||||||||||||||||| |||
Sbjct: 847 aggctcacaagaactacagctgccattctggagtacctgagtatcgtggagttcaatttc 788

                                                                     
Query: 456 aacattgtgtagaggaatttatcgaccttttgttcgttcacaacagcttgcttcccat 513
           ||||||||||| ||||||||||| ||||| ||||| ||||||||| ||||| ||||||
Sbjct: 787 aacattgtgtaaaggaatttatcaaccttctgttcattcacaacaacttgcctcccat 730

---

>ref|XM_481609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2970

 Score =  258 bits (130), Expect = 2e-65
 Identities = 262/306 (85%)
 Strand = Plus / Minus

                                                                        
Query: 279  aatgtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctctaca 338
            |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 2960 aatgtgacaacatctcttctgtatcccctaactatcaacatgcgtgggacgttctctaca 2901

                                                                        
Query: 339  agcatatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggagggagg 398
            |||| ||||||||||||||||||||| || |||||||| || |  ||||| |||||||||
Sbjct: 2900 agcagatccatgtactccatgtagaaatacgcagggtgatttaatggtggtggagggagg 2841

                                                                        
Query: 399  ctcaccagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttcaac 458
            || || || |||||||||||||| ||||||| ||| ||||| || ||||||| ||| |||
Sbjct: 2840 cttacgaggaccacagctgccattctggagtacctaagtattgtcgagttcagcttgaac 2781

                                                                        
Query: 459  attgtgtagaggaatttatcgaccttttgttcgttcacaacagcttgcttcccatccacc 518
            ||||| ||||||||||| || | ||| ||||| ||||||||  ||||||| || ||| ||
Sbjct: 2780 attgtatagaggaatttctcaatcttctgttcattcacaactacttgctttccgtcctcc 2721

                                                                        
Query: 519  atctgcggccggccttctctttctgtggtttccttcatctcggaaaggtatgcactgatc 578
            ||  | ||  | |||||||||| ||  |||||||||||||| || |||||||  ||||||
Sbjct: 2720 attagtggatgtccttctctttgtgcagtttccttcatctcagagaggtatgtgctgatc 2661

                  
Query: 579  cttcgc 584
            ||||||
Sbjct: 2660 cttcgc 2655

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  258 bits (130), Expect = 2e-65
 Identities = 262/306 (85%)
 Strand = Plus / Plus

                                                                            
Query: 279      aatgtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctctaca 338
                |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 14179399 aatgtgacaacatctcttctgtatcccctaactatcaacatgcgtgggacgttctctaca 14179458

                                                                            
Query: 339      agcatatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggagggagg 398
                |||| ||||||||||||||||||||| || |||||||| || |  ||||| |||||||||
Sbjct: 14179459 agcagatccatgtactccatgtagaaatacgcagggtgatttaatggtggtggagggagg 14179518

                                                                            
Query: 399      ctcaccagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttcaac 458
                || || || |||||||||||||| ||||||| ||| ||||| || ||||||| ||| |||
Sbjct: 14179519 cttacgaggaccacagctgccattctggagtacctaagtattgtcgagttcagcttgaac 14179578

                                                                            
Query: 459      attgtgtagaggaatttatcgaccttttgttcgttcacaacagcttgcttcccatccacc 518
                ||||| ||||||||||| || | ||| ||||| ||||||||  ||||||| || ||| ||
Sbjct: 14179579 attgtatagaggaatttctcaatcttctgttcattcacaactacttgctttccgtcctcc 14179638

                                                                            
Query: 519      atctgcggccggccttctctttctgtggtttccttcatctcggaaaggtatgcactgatc 578
                ||  | ||  | |||||||||| ||  |||||||||||||| || |||||||  ||||||
Sbjct: 14179639 attagtggatgtccttctctttgtgcagtttccttcatctcagagaggtatgtgctgatc 14179698

                      
Query: 579      cttcgc 584
                ||||||
Sbjct: 14179699 cttcgc 14179704

---

>dbj|AP005493.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0078D03
          Length = 176593

 Score =  258 bits (130), Expect = 2e-65
 Identities = 262/306 (85%)
 Strand = Plus / Plus

                                                                         
Query: 279   aatgtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctctaca 338
             |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 83688 aatgtgacaacatctcttctgtatcccctaactatcaacatgcgtgggacgttctctaca 83747

                                                                         
Query: 339   agcatatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggagggagg 398
             |||| ||||||||||||||||||||| || |||||||| || |  ||||| |||||||||
Sbjct: 83748 agcagatccatgtactccatgtagaaatacgcagggtgatttaatggtggtggagggagg 83807

                                                                         
Query: 399   ctcaccagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttcaac 458
             || || || |||||||||||||| ||||||| ||| ||||| || ||||||| ||| |||
Sbjct: 83808 cttacgaggaccacagctgccattctggagtacctaagtattgtcgagttcagcttgaac 83867

                                                                         
Query: 459   attgtgtagaggaatttatcgaccttttgttcgttcacaacagcttgcttcccatccacc 518
             ||||| ||||||||||| || | ||| ||||| ||||||||  ||||||| || ||| ||
Sbjct: 83868 attgtatagaggaatttctcaatcttctgttcattcacaactacttgctttccgtcctcc 83927

                                                                         
Query: 519   atctgcggccggccttctctttctgtggtttccttcatctcggaaaggtatgcactgatc 578
             ||  | ||  | |||||||||| ||  |||||||||||||| || |||||||  ||||||
Sbjct: 83928 attagtggatgtccttctctttgtgcagtttccttcatctcagagaggtatgtgctgatc 83987

                   
Query: 579   cttcgc 584
             ||||||
Sbjct: 83988 cttcgc 83993

---

>dbj|AK060470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E02, full
           insert sequence
          Length = 1383

 Score =  258 bits (130), Expect = 2e-65
 Identities = 262/306 (85%)
 Strand = Plus / Minus

                                                                       
Query: 279 aatgtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctctaca 338
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 913 aatgtgacaacatctcttctgtatcccctaactatcaacatgcgtgggacgttctctaca 854

                                                                       
Query: 339 agcatatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggagggagg 398
           |||| ||||||||||||||||||||| || |||||||| || |  ||||| |||||||||
Sbjct: 853 agcagatccatgtactccatgtagaaatacgcagggtgatttaatggtggtggagggagg 794

                                                                       
Query: 399 ctcaccagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttcaac 458
           || || || |||||||||||||| ||||||| ||| ||||| || ||||||| ||| |||
Sbjct: 793 cttacgaggaccacagctgccattctggagtacctaagtattgtcgagttcagcttgaac 734

                                                                       
Query: 459 attgtgtagaggaatttatcgaccttttgttcgttcacaacagcttgcttcccatccacc 518
           ||||| ||||||||||| || | ||| ||||| ||||||||  ||||||| || ||| ||
Sbjct: 733 attgtatagaggaatttctcaatcttctgttcattcacaactacttgctttccgtcctcc 674

                                                                       
Query: 519 atctgcggccggccttctctttctgtggtttccttcatctcggaaaggtatgcactgatc 578
           ||  | ||  | |||||||||| ||  |||||||||||||| || |||||||  ||||||
Sbjct: 673 attagtggatgtccttctctttgtgcagtttccttcatctcagagaggtatgtgctgatc 614

                 
Query: 579 cttcgc 584
           ||||||
Sbjct: 613 cttcgc 608

---

>ref|NM_189287.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3813

 Score =  168 bits (85), Expect = 1e-38
 Identities = 178/209 (85%)
 Strand = Plus / Minus

                                                                        
Query: 282  gtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctctacaagc 341
            ||||| ||||||||||| |||||||| |||||||  || |  |||| |||||||||||||
Sbjct: 3800 gtgacgacatctcttctgtatcccctaactatcaggatcctcgggatgttctctacaagc 3741

                                                                        
Query: 342  atatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggagggaggctc 401
            | ||||||||||||||||||| |||||||  |||||||||| |||||||| || ||||||
Sbjct: 3740 agatccatgtactccatgtagcagtatgccaggtggttcagtggtggcggtggaaggctc 3681

                                                                        
Query: 402  accagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttcaacatt 461
            || ||||||||  ||||||||||||||||||| || || || | ||||| ||||| ||| 
Sbjct: 3680 acgagcaccacgactgccatcctggagtgcctaaggatagtagcgttcagcttcagcatc 3621

                                         
Query: 462  gtgtagaggaatttatcgaccttttgttc 490
            ||||||||||| || || ||||| |||||
Sbjct: 3620 gtgtagaggaacttttcaaccttctgttc 3592

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  168 bits (85), Expect = 1e-38
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                            
Query: 282      gtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctctacaagc 341
                ||||| ||||||||||| |||||||| |||||||  || |  |||| |||||||||||||
Sbjct: 11252233 gtgacgacatctcttctgtatcccctaactatcaggatcctcgggatgttctctacaagc 11252292

                                                                            
Query: 342      atatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggagggaggctc 401
                | ||||||||||||||||||| |||||||  |||||||||| |||||||| || ||||||
Sbjct: 11252293 agatccatgtactccatgtagcagtatgccaggtggttcagtggtggcggtggaaggctc 11252352

                                                                            
Query: 402      accagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttcaacatt 461
                || ||||||||  ||||||||||||||||||| || || || | ||||| ||||| ||| 
Sbjct: 11252353 acgagcaccacgactgccatcctggagtgcctaaggatagtagcgttcagcttcagcatc 11252412

                                             
Query: 462      gtgtagaggaatttatcgaccttttgttc 490
                ||||||||||| || || ||||| |||||
Sbjct: 11252413 gtgtagaggaacttttcaaccttctgttc 11252441

---

>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0475H04
          Length = 143337

 Score =  168 bits (85), Expect = 1e-38
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                         
Query: 282   gtgacaacatctcttctatatcccctgactatcaacatgcgtgggacgttctctacaagc 341
             ||||| ||||||||||| |||||||| |||||||  || |  |||| |||||||||||||
Sbjct: 39638 gtgacgacatctcttctgtatcccctaactatcaggatcctcgggatgttctctacaagc 39697

                                                                         
Query: 342   atatccatgtactccatgtagaagtatgcagggtggttcagcggtggcggagggaggctc 401
             | ||||||||||||||||||| |||||||  |||||||||| |||||||| || ||||||
Sbjct: 39698 agatccatgtactccatgtagcagtatgccaggtggttcagtggtggcggtggaaggctc 39757

                                                                         
Query: 402   accagcaccacagctgccatcctggagtgcctgagtatcgtggagttcaacttcaacatt 461
             || ||||||||  ||||||||||||||||||| || || || | ||||| ||||| ||| 
Sbjct: 39758 acgagcaccacgactgccatcctggagtgcctaaggatagtagcgttcagcttcagcatc 39817

                                          
Query: 462   gtgtagaggaatttatcgaccttttgttc 490
             ||||||||||| || || ||||| |||||
Sbjct: 39818 gtgtagaggaacttttcaaccttctgttc 39846

---

>gb|AF021220.1|AF021220 Nicotiana tabacum cation-chloride co-transporter mRNA, complete cds
          Length = 3456

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 345  tccatgtactccatgtagaagtatgcagg 373
            ||||||||||||||||||||| |||||||
Sbjct: 3164 tccatgtactccatgtagaaggatgcagg 3136

---

>gb|AF227153.1| Crotalus atrox serine protease catroxase I precursor, mRNA,
           complete cds
          Length = 921

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 288 acatctcttctatatcccctgac 310
           |||||||||||||||||||||||
Sbjct: 818 acatctcttctatatcccctgac 840

---

>ref|NM_179401.1| Arabidopsis thaliana CCC1; cation:chloride symporter AT1G30450 (CCC1)
            transcript variant AT1G30450.3 mRNA, complete cds
          Length = 3260

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 312  atcaacatgcgtgggacgttctctacaagcatatccatgtactccatgtagaagtatgca 371
            |||||||| | ||| || ||||| || |||| |||||| || ||||||||||| || || 
Sbjct: 3051 atcaacatccttggcacattctccaccagcaaatccatatattccatgtagaaatacgcc 2992

                                                              
Query: 372  gggtggttcagcggtggcggagggaggctcaccagcaccacagctgccat 421
            ||||| |||| ||| || || ||||| || ||||| ||||| || |||||
Sbjct: 2991 gggtgattcaacggaggtggcgggagactaaccagaaccactgcggccat 2942

---

>ref|NM_102781.2| Arabidopsis thaliana CCC1; cation:chloride symporter AT1G30450 (CCC1)
            transcript variant AT1G30450.1 mRNA, complete cds
          Length = 3409

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 312  atcaacatgcgtgggacgttctctacaagcatatccatgtactccatgtagaagtatgca 371
            |||||||| | ||| || ||||| || |||| |||||| || ||||||||||| || || 
Sbjct: 3051 atcaacatccttggcacattctccaccagcaaatccatatattccatgtagaaatacgcc 2992

                                                              
Query: 372  gggtggttcagcggtggcggagggaggctcaccagcaccacagctgccat 421
            ||||| |||| ||| || || ||||| || ||||| ||||| || |||||
Sbjct: 2991 gggtgattcaacggaggtggcgggagactaaccagaaccactgcggccat 2942

---

>ref|NM_179400.1| Arabidopsis thaliana CCC1; cation:chloride symporter AT1G30450 (CCC1)
            transcript variant AT1G30450.2 mRNA, complete cds
          Length = 3432

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 312  atcaacatgcgtgggacgttctctacaagcatatccatgtactccatgtagaagtatgca 371
            |||||||| | ||| || ||||| || |||| |||||| || ||||||||||| || || 
Sbjct: 3051 atcaacatccttggcacattctccaccagcaaatccatatattccatgtagaaatacgcc 2992

                                                              
Query: 372  gggtggttcagcggtggcggagggaggctcaccagcaccacagctgccat 421
            ||||| |||| ||| || || ||||| || ||||| ||||| || |||||
Sbjct: 2991 gggtgattcaacggaggtggcgggagactaaccagaaccactgcggccat 2942

---

>gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G16 sequence, complete
             sequence
          Length = 75799

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                         
Query: 312   atcaacatgcgtgggacgttctctacaagcatatccatgtactccatgtagaagtatgca 371
             |||||||| | ||| || ||||| || |||| |||||| || ||||||||||| || || 
Sbjct: 19868 atcaacatccttggcacattctccaccagcaaatccatatattccatgtagaaatacgcc 19809

                                                               
Query: 372   gggtggttcagcggtggcggagggaggctcaccagcaccacagctgccat 421
             ||||| |||| ||| || || ||||| || ||||| ||||| || |||||
Sbjct: 19808 gggtgattcaacggaggtggcgggagactaaccagaaccactgcggccat 19759

---

>emb|AM113986.1| Arabidopsis thaliana mRNA for cation chloride cotransporter (ccc
            gene)
          Length = 3144

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 312  atcaacatgcgtgggacgttctctacaagcatatccatgtactccatgtagaagtatgca 371
            |||||||| | ||| || ||||| || |||| |||||| || ||||||||||| || || 
Sbjct: 3052 atcaacatccttggcacattctccaccagcaaatccatatattccatgtagaaatacgcc 2993

                                                              
Query: 372  gggtggttcagcggtggcggagggaggctcaccagcaccacagctgccat 421
            ||||| |||| ||| || || ||||| || ||||| ||||| || |||||
Sbjct: 2992 gggtgattcaacggaggtggcgggagactaaccagaaccactgcggccat 2943

---

>gb|AC131989.8| Mus musculus chromosome 14, clone RP24-186N15, complete sequence
          Length = 180932

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     attcatctgatgtgtaaagaa 96
              |||||||||||||||||||||
Sbjct: 123478 attcatctgatgtgtaaagaa 123458

---

>ref|XM_606422.2| PREDICTED: Bos taurus similar to Potassium voltage-gated channel
           subfamily E member 1 (IKs producing slow voltage-gated
           potassium channel beta subunit Mink) (Minimal potassium
           channel) (Delayed rectifier potassium channel subunit
           IsK) (LOC528014), mRNA
          Length = 650

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 551 cttcatctcggaaaggtatgcactg 575
           ||||||||||| |||||||||||||
Sbjct: 378 cttcatctcgggaaggtatgcactg 354

---

>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence
          Length = 182677

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    tcaccagcaccacagctgcca 420
              |||||||||||||||||||||
Sbjct: 158329 tcaccagcaccacagctgcca 158309

---

>gb|BC112873.1| Bos taurus cDNA clone MGC:137467 IMAGE:8175514, complete cds
          Length = 909

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 551 cttcatctcggaaaggtatgcactg 575
           ||||||||||| |||||||||||||
Sbjct: 596 cttcatctcgggaaggtatgcactg 572

---

>gb|AC097659.3| Homo sapiens BAC clone RP11-408C24 from 4, complete sequence
          Length = 131944

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 532    cttctctttctgtggtttccttcat 556
              ||||||| |||||||||||||||||
Sbjct: 129742 cttctctgtctgtggtttccttcat 129718

---

>dbj|AK032157.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430403M04 product:tubulin alpha
            8, full insert sequence
          Length = 2164

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 533  ttctctttctgtggtttcctt 553
            |||||||||||||||||||||
Sbjct: 1567 ttctctttctgtggtttcctt 1547

---

>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208921

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 533   ttctctttctgtggtttcctt 553
             |||||||||||||||||||||
Sbjct: 57827 ttctctttctgtggtttcctt 57847

---

>ref|NM_105896.2| Arabidopsis thaliana P40; structural constituent of ribosome
           AT1G72370 (P40) transcript variant AT1G72370.1 mRNA,
           complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 939 gcttcccatccaccatctgc 920

---

>ref|XM_519178.1| PREDICTED: Pan troglodytes similar to Heterogeneous nuclear
           ribonucleoprotein A1 (Helix-destabilizing protein)
           (Single-strand binding protein) (hnRNP core protein A1)
           (HDP-1) (Topoisomerase-inhibitor suppressed)
           (LOC463509), mRNA
          Length = 1196

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 caccagcaccacagctgcca 420
           ||||||||||||||||||||
Sbjct: 807 caccagcaccacagctgcca 788

---

>emb|CR956426.6| Pig DNA sequence from clone CH242-42M23 on chromosome 17, complete
              sequence
          Length = 135274

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 278    aaatgtgacaacatctcttctatatccc 305
              ||||||||||| ||||||||||| ||||
Sbjct: 108430 aaatgtgacaaaatctcttctatttccc 108403

---

>gb|AC131751.2| Mus musculus BAC clone RP23-19P8 from 10, complete sequence
          Length = 185680

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    atgtgtaaagaatgaagaca 104
             ||||||||||||||||||||
Sbjct: 60043 atgtgtaaagaatgaagaca 60062

---

>emb|AL590322.4| Human DNA sequence from clone RP11-536F2 on chromosome 9 Contains a CpG
             island, complete sequence
          Length = 120586

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    atgaagacactatattttgc 115
             ||||||||||||||||||||
Sbjct: 94327 atgaagacactatattttgc 94308

---

>emb|AL354893.14| Human DNA sequence from clone RP11-80I15 on chromosome 9 Contains an
             RPS26 (ribosomal protein S26) pseudogene, the 3' end of
             the FANCC gene for Fanconi anemia complementation group C,
             the 3' end of gene FLJ14675, a novel gene and a CpG
             island, complete sequence
          Length = 103980

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 531   ccttctctttctgtggtttccttcatct 558
             |||| |||||||||| ||||||||||||
Sbjct: 94883 ccttttctttctgtgctttccttcatct 94910

---

>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat
              shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a
              novel gene and a ribosomal protein L21 (RPL21) pseudogene,
              complete sequence
          Length = 197634

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     gtatggagaacaggggtaca 56
              ||||||||||||||||||||
Sbjct: 103813 gtatggagaacaggggtaca 103794

---

>gb|BT000421.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin
           receptor-like protein) (At1g72370) mRNA, complete cds
          Length = 1032

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 854 gcttcccatccaccatctgc 835

---

>emb|Y10379.1|ATRPP40 A.thaliana gene encoding ribosomal protein P40
          Length = 3690

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 505  gcttcccatccaccatctgc 524
            ||||||||||||||||||||
Sbjct: 3246 gcttcccatccaccatctgc 3227

---

>emb|X89366.1|AT40KDAPR A.thaliana DNA for 40 kDa protein gene
          Length = 2049

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 505  gcttcccatccaccatctgc 524
            ||||||||||||||||||||
Sbjct: 1735 gcttcccatccaccatctgc 1716

---

>emb|X69056.1|ATLRH A.thaliana mRNA for laminin receptor homologue
          Length = 1073

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 859 gcttcccatccaccatctgc 840

---

>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the
              5' end of the gene for a novel protein similar to human
              KIBRA, a pseudogene similar to part of actin, the Odz2 gene
              for odd Oz/ten-m homolog 2 (Drosophila) and two CpG
              islands, complete sequence
          Length = 186736

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tgatgtgtaaagaatgaaga 102
              ||||||||||||||||||||
Sbjct: 127869 tgatgtgtaaagaatgaaga 127850

---

>gb|AY136324.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin
           receptor-like protein) (At1g72370) mRNA, complete cds
          Length = 1103

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 916 gcttcccatccaccatctgc 897

---

>gb|AY114561.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin
           receptor-like protein) (At1g72370) mRNA, complete cds
          Length = 1042

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 854 gcttcccatccaccatctgc 835

---

>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence
          Length = 149005

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    tgacaacatctcttctatat 302
              ||||||||||||||||||||
Sbjct: 142039 tgacaacatctcttctatat 142058

---

>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
             sequence
          Length = 99345

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   tttgatcaagtaaaaaatgt 283
             ||||||||||||||||||||
Sbjct: 49443 tttgatcaagtaaaaaatgt 49462

---

>gb|AY079041.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds
          Length = 897

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 854 gcttcccatccaccatctgc 835

---

>gb|AY065096.1| Arabidopsis thaliana putative 40S ribosomal protein SA (laminin
           receptor-like protein) (At1g72370; T10D10.16) mRNA,
           complete cds
          Length = 1151

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 936 gcttcccatccaccatctgc 917

---

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 20      ttctaataaaactgtcagta 39
               ||||||||||||||||||||
Sbjct: 1550009 ttctaataaaactgtcagta 1550028

---

>gb|AY058885.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 939 gcttcccatccaccatctgc 920

---

>gb|AY054211.1| Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds
          Length = 1168

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 919 gcttcccatccaccatctgc 900

---

>gb|AC153764.3| Loxodonta africana clone VMRC15-169D19, complete sequence
          Length = 147688

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   ctctttctgtggtttccttc 554
             ||||||||||||||||||||
Sbjct: 95679 ctctttctgtggtttccttc 95698

---

>emb|BX817196.1|CNS0AD2L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH91ZG07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1125

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 925 gcttcccatccaccatctgc 906

---

>emb|BX816779.1|CNS0AD9Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH67ZH07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1096

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 923 gcttcccatccaccatctgc 904

---

>emb|BX815045.1|CNS0ACSY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS27ZF04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 541

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 295 gcttcccatccaccatctgc 276

---

>gb|M55071.1|BOVHLADRB2 Bovine MHC DR-beta pseudogene, exons n+1 and n+2
          Length = 1164

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  tttgtaatgaccaagtattc 79
           ||||||||||||||||||||
Sbjct: 912 tttgtaatgaccaagtattc 931

---

>emb|BX814998.1|CNS0AAO4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS23ZA01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1126

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 909 gcttcccatccaccatctgc 890

---

>gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10D10 genomic sequence, complete
             sequence
          Length = 87039

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   gcttcccatccaccatctgc 524
             ||||||||||||||||||||
Sbjct: 70038 gcttcccatccaccatctgc 70019

---

>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete
            sequence
          Length = 203909

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   atgtgtaaagaatgaagaca 104
            ||||||||||||||||||||
Sbjct: 6655 atgtgtaaagaatgaagaca 6636

---

>gb|AY087976.1| Arabidopsis thaliana clone 40091 mRNA, complete sequence
          Length = 1177

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 936 gcttcccatccaccatctgc 917

---

>gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosome 12, complete
             sequence
          Length = 177886

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 461   tgtgtagaggaatttatcgaccttttgt 488
             |||||||||||||||||  |||||||||
Sbjct: 44062 tgtgtagaggaatttataaaccttttgt 44035

---

>emb|CR962131.2| Medicago truncatula chromosome 5 clone mth2-69b10, COMPLETE SEQUENCE
          Length = 115407

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   tgacaacatctcttctatat 302
             ||||||||||||||||||||
Sbjct: 32497 tgacaacatctcttctatat 32516

---

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 20      ttctaataaaactgtcagta 39
               ||||||||||||||||||||
Sbjct: 1367700 ttctaataaaactgtcagta 1367681

---

>emb|AL844865.6| Mouse DNA sequence from clone RP23-350L23 on chromosome 2, complete
             sequence
          Length = 197785

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    tacaaaatttgtaatgaccaagta 76
             ||||||||||| ||||||||||||
Sbjct: 87047 tacaaaatttgaaatgaccaagta 87070

---

>gb|U01955.1|ATU01955 Arabidopsis thaliana Columbia laminin receptor-like protein mRNA,
           complete cds
          Length = 1137

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 505 gcttcccatccaccatctgc 524
           ||||||||||||||||||||
Sbjct: 908 gcttcccatccaccatctgc 889


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,302,750
Number of Sequences: 3902068
Number of extensions: 5302750
Number of successful extensions: 124768
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124578
Number of HSP's gapped (non-prelim): 183
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---