ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61p04 |
|---|---|
| Clone Library Name | barley_pub |
>RIN4_ARATH (Q8GYN5) RPM1-interacting protein 4| Length = 211 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Frame = -3 Query: 515 VPAFGDWDMKNGAMPD-YSMDFSKIREMR 432 VP FGDWD N + D Y+ F+K+RE R Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREER 176
>NARB_SYNY3 (P73448) Nitrate reductase (EC 1.7.99.4)| Length = 714 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 238 LRNLFLPVGESSRPWSGPWSLAGAPSLVG 324 L NL L G+ +P SGP+SL G P+ +G Sbjct: 322 LINLHLLTGQIGKPGSGPFSLTGQPNAMG 350
>NAPA_YERPS (Q668I0) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 830 Score = 31.2 bits (69), Expect = 1.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S P SGP+SL G PS G Sbjct: 389 NLHLLTGKISTPGSGPFSLTGQPSACG 415
>NAPA_YERPE (Q8ZCF3) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 830 Score = 31.2 bits (69), Expect = 1.9 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S P SGP+SL G PS G Sbjct: 389 NLHLLTGKISTPGSGPFSLTGQPSACG 415
>YKC3_YEAST (P36103) Hypothetical 32.3 kDa protein in URA6-CDC16 intergenic| region Length = 277 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -3 Query: 485 NGAMPDYSMDFSKIREMRKQNKKELS 408 NGA P ++D SK E R++N KELS Sbjct: 130 NGASPSPNLDRSKKNEKRRKNAKELS 155
>NAPA_SHISS (Q3Z001) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_SHIFL (Q83QV0) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_SHIDS (Q32I06) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_SHIBS (Q31Z29) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_SALTY (Q8ZNH6) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_SALTI (Q8Z570) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_SALPA (Q5PI61) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_SALCH (Q57M92) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_ECOLI (P33937) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_ECOL6 (Q8CVW4) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_ECO57 (Q8XE47) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 30.0 bits (66), Expect = 4.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 NL L G+ S+P GP+SL G PS G Sbjct: 389 NLHLLTGKISQPGCGPFSLTGQPSACG 415
>NAPA_PASMU (Q9CKL8) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 N+ L G+ S+P GP+SL G PS G Sbjct: 389 NIHLLTGKISKPGCGPFSLTGQPSACG 415
>NASA_KLEOX (Q06457) Nitrate reductase (EC 1.7.99.4)| Length = 866 Score = 29.3 bits (64), Expect = 7.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVGWGALDG 342 N+ L G+ RP GP+SL G P+ +G + G Sbjct: 301 NVHLACGKYGRPGCGPFSLTGQPNAMGGREVGG 333
>NAPA_MANSM (Q65Q72) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 830 Score = 29.3 bits (64), Expect = 7.3 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 N+ L G+ S+P GP+SL G PS G Sbjct: 391 NVHLLTGKISKPGCGPFSLTGQPSACG 417
>NAPA_ERWCT (Q6D5Z2) Periplasmic nitrate reductase precursor (EC 1.7.99.4)| Length = 828 Score = 29.3 bits (64), Expect = 7.3 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 244 NLFLPVGESSRPWSGPWSLAGAPSLVG 324 N+ L G+ S+P GP+SL G PS G Sbjct: 389 NIHLLTGKISQPGCGPFSLTGQPSACG 415
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 9.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -3 Query: 500 DWDMKNGAMPDYSMDFSKIREMRKQNKKELSRASLGG 390 D DMK+G M DY DF + E +K + R GG Sbjct: 531 DDDMKSGKMGDYKSDFDLMLERKKSMSGKQRRNRDGG 567 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,659,487 Number of Sequences: 219361 Number of extensions: 937355 Number of successful extensions: 2838 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2836 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
