ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61p04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016998.1| Zea mays clone EK07D2309C06.c mRNA sequence 278 2e-71
2gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete seq... 278 2e-71
3gb|AY103831.1| Zea mays PCO108346 mRNA sequence 278 2e-71
4ref|XM_470302.1| Oryza sativa (japonica cultivar-group), mRNA 262 1e-66
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 262 1e-66
6gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 262 1e-66
7gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome... 262 1e-66
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
9dbj|AK063222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
10ref|NM_196413.1| Oryza sativa (japonica cultivar-group) hypothet... 250 4e-63
11gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare str... 250 4e-63
12gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare str... 250 4e-63
13gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nippo... 250 4e-63
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 250 4e-63
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 250 4e-63
16dbj|AK066928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
17gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
20gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
21gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.12
22gb|AF411804.1| Lycopersicon esculentum BAC clone Clemson_ID 47I1... 44 0.47
23gb|L43074.1|STMFABD Streptomyces glaucescens fabD, fabH, fabC, f... 44 0.47
24ref|XM_482868.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
25ref|XM_482867.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
26ref|XM_482864.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
27ref|XM_482863.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
28ref|XM_480923.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
29gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
30emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 42 1.8
31emb|AL844847.6| Zebrafish DNA sequence from clone DKEY-13A21 in ... 42 1.8
32emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
33emb|AJ224512.2|SNO224512 Streptomyces nogalater nogalamycin bios... 42 1.8
34emb|AJ006687.1|CCR6687 Caulobacter crescentus major chemotaxis o... 42 1.8
35gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.8
36gb|AE005716.1| Caulobacter crescentus CB15 section 42 of 359 of ... 42 1.8
37gb|AC090486.3| Genomic sequence for Oryza sativa (japonica cult... 42 1.8
38gb|AC148693.1| Macaca mulatta Major Histocompatibility Complex B... 42 1.8
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
40dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
41dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.8
43gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.8
44gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.8
45dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
46dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
47dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
48dbj|AK110377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
49dbj|AK107363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
50dbj|AK107305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
51dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
52dbj|AK101662.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
53emb|X15820.1|OSNIA134 Oryza sativa partial nia1 gene for nitrate... 42 1.8
54gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.8
55gb|AY579780.1| Avian pneumovirus from USA, complete genome 40 7.3
56ref|XM_465635.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
57ref|XM_366349.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 7.3
58gb|BC052065.1| Mus musculus Rap1 GTPase-activating protein, mRNA... 40 7.3
59gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Canc... 40 7.3
60ref|XM_979077.1| PREDICTED: Mus musculus Rap1, GTPase-activating... 40 7.3
61ref|XM_149500.8| PREDICTED: Mus musculus Rap1, GTPase-activating... 40 7.3
62ref|XM_741713.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.3
63gb|AY337138.1| Uncultured sulfate-reducing bacterium clone M3000... 40 7.3
64gb|DQ148256.1| Macaca mulatta clone ss1_e15_t7_495 3' UTR 40 7.3
65gb|DQ148245.1| Macaca mulatta clone ss1_m08_t7_482 3' UTR 40 7.3
66gb|DQ148175.1| Macaca mulatta clone ss1_c16_t7_392 3' UTR 40 7.3
67gb|AC164100.2| Mus musculus BAC clone RP23-11E1 from chromosome ... 40 7.3
68emb|X86475.1|SCDNAFABD S.coelicolor fabD, fabH, and acpP genes 40 7.3
69emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 7.3
70gb|AE011971.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.3
71ref|NM_134301.3| Drosophila melanogaster caudal CG1759-RB, trans... 40 7.3
72ref|NM_057606.4| Drosophila melanogaster caudal CG1759-RA, trans... 40 7.3
73gb|AY069565.1| Drosophila melanogaster LD29596 full length cDNA 40 7.3
74gb|L49462.1|NIAMTZB Catenotaenia lobata 12S ribosomal RNA gene, ... 40 7.3
75gb|AF368170.1|AF368170 Avian pneumovirus fusion protein gene, pa... 40 7.3
76tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome 40 7.3
77gb|AC148706.1| Macaca mulatta Major Histocompatibility Complex B... 40 7.3
78dbj|AK019076.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 7.3
79dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
80dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
81dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
82gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 40 7.3
83dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
84gb|AY590688.1| Avian pneumovirus strain Colorado, complete genome 40 7.3
85gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cance... 40 7.3
86dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
87gb|AF187153.1|AF187153 Avian pneumovirus isolate 1b fusion prote... 40 7.3
88dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
89dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
90dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
91dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
92dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
93dbj|AK109579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
94dbj|AK059777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
95gb|AF085228.1|AF085228 Avian pneumovirus matrix protein (M) gene... 40 7.3
96gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77... 40 7.3
97emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in ... 40 7.3
98emb|AJ318065.1|PVI318065 Pseudorabies virus ul39 gene (partial),... 40 7.3
99emb|X80797.1|PVPCA Pseudorabies Virus genomic DNA 40 7.3
100gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 40 7.3
101gb|AC134987.5| Mus musculus BAC clone RP23-117E24 from 14, compl... 40 7.3
102emb|AL805954.9| Mouse DNA sequence from clone RP23-277N22 on chr... 40 7.3 
>gb|BT016998.1| Zea mays clone EK07D2309C06.c mRNA sequence
          Length = 679

 Score =  278 bits (140), Expect = 2e-71
 Identities = 152/156 (97%)
 Strand = Plus / Minus

                                                                       
Query: 369 gtgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctg 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctg 206

                                                                       
Query: 429 cttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttctt 488
           |||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 205 cttgcgcatctcgcggatcttggagaagtccatggagtagtccggcagcgcgccgttctt 146

                                               
Query: 489 catgtcccagtccccgaacgccggcaccgtcatcca 524
           | ||||||||||||||||||||||||||||||||||
Sbjct: 145 cgtgtcccagtccccgaacgccggcaccgtcatcca 110



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 207 tcttcaggccttgatacagcactggaaatagctcaggaacctcttcc 253
           |||||||||||||||||| ||| |||| |||||||||||| ||||||
Sbjct: 397 tcttcaggccttgatacaacaccggaagtagctcaggaacttcttcc 351
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>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence
          Length = 117931

 Score =  278 bits (140), Expect = 2e-71
 Identities = 152/156 (97%)
 Strand = Plus / Minus

                                                                         
Query: 369   gtgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctg 428
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 82277 gtgggcgaggaggtcgtcgtcgccgccgatgctggcgcgggagagctccttcttgttctg 82218

                                                                         
Query: 429   cttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttctt 488
             |||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 82217 cttgcgcatctcgcggatcttggagaagtccatggagtagtccggcagcgcgccgttctt 82158

                                                 
Query: 489   catgtcccagtccccgaacgccggcaccgtcatcca 524
             ||||||||||||||||||||||||||||||||||||
Sbjct: 82157 catgtcccagtccccgaacgccggcaccgtcatcca 82122



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 207   tcttcaggccttgatacagcactggaaatagctcaggaacctcttcc 253
             |||||||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 83928 tcttcaggccttgatacaacactggaagtagctcaggaacttcttcc 83882
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>gb|AY103831.1| Zea mays PCO108346 mRNA sequence
          Length = 1159

 Score =  278 bits (140), Expect = 2e-71
 Identities = 152/156 (97%)
 Strand = Plus / Minus

                                                                       
Query: 369 gtgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctg 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctg 586

                                                                       
Query: 429 cttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttctt 488
           |||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 585 cttgcgcatctcgcggatcttggagaagtccatggagtagtccggcagcgcgccgttctt 526

                                               
Query: 489 catgtcccagtccccgaacgccggcaccgtcatcca 524
           | ||||||||||||||||||||||||||||||||||
Sbjct: 525 cgtgtcccagtccccgaacgccggcaccgtcatcca 490



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                       
Query: 207 tcttcaggccttgatacagcactggaaatagctcaggaacctcttccttccggtgggcga 266
           ||||||||||||||||||||||||||| |||||||||||| |||||| ||| || || ||
Sbjct: 807 tcttcaggccttgatacagcactggaagtagctcaggaacttcttccctcccgttgggga 748

                                
Query: 267 gtcgtcgcggccgtggagcgg 287
           || ||||||| ||||||||||
Sbjct: 747 gtggtcgcgggcgtggagcgg 727
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>ref|XM_470302.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 342

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Minus

                                                                       
Query: 370 tgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgc 429
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 209 tgggcgaggaggtcgtcgtcgccgccgaggctggtgcgggagagctccttcttgttctgc 150

                                                                       
Query: 430 ttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttc 489
           || |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 149 ttccgcatctcgcggatcttggagaaatccatggagtagtccggcagcgcgccgttcttc 90

                                               
Query: 490 atgtcccagtccccgaacgccggcaccgtcatccac 525
           ||||||||||||||||||||||||||||||||||||
Sbjct: 89  atgtcccagtccccgaacgccggcaccgtcatccac 54
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Plus

                                                                           
Query: 370     tgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgc 429
               |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3731756 tgggcgaggaggtcgtcgtcgccgccgaggctggtgcgggagagctccttcttgttctgc 3731815

                                                                           
Query: 430     ttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttc 489
               || |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 3731816 ttccgcatctcgcggatcttggagaaatccatggagtagtccggcagcgcgccgttcttc 3731875

                                                   
Query: 490     atgtcccagtccccgaacgccggcaccgtcatccac 525
               ||||||||||||||||||||||||||||||||||||
Sbjct: 3731876 atgtcccagtccccgaacgccggcaccgtcatccac 3731911



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 207     tcttcaggccttgatacagcactggaaatagctcaggaacctcttccttcc 257
               |||||||||||| |||||||||||||| |||||||| ||| || |||||||
Sbjct: 3729851 tcttcaggccttaatacagcactggaagtagctcagaaacgtcctccttcc 3729901
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>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
             sequence
          Length = 160738

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Minus

                                                                         
Query: 370   tgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgc 429
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 49621 tgggcgaggaggtcgtcgtcgccgccgaggctggtgcgggagagctccttcttgttctgc 49562

                                                                         
Query: 430   ttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttc 489
             || |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 49561 ttccgcatctcgcggatcttggagaaatccatggagtagtccggcagcgcgccgttcttc 49502

                                                 
Query: 490   atgtcccagtccccgaacgccggcaccgtcatccac 525
             ||||||||||||||||||||||||||||||||||||
Sbjct: 49501 atgtcccagtccccgaacgccggcaccgtcatccac 49466



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 207   tcttcaggccttgatacagcactggaaatagctcaggaacctcttccttcc 257
             |||||||||||| |||||||||||||| |||||||| ||| || |||||||
Sbjct: 51526 tcttcaggccttaatacagcactggaagtagctcagaaacgtcctccttcc 51476
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>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNAa0091P11, complete sequence
          Length = 132151

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Plus

                                                                         
Query: 370   tgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgc 429
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10380 tgggcgaggaggtcgtcgtcgccgccgaggctggtgcgggagagctccttcttgttctgc 10439

                                                                         
Query: 430   ttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttc 489
             || |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 10440 ttccgcatctcgcggatcttggagaaatccatggagtagtccggcagcgcgccgttcttc 10499

                                                 
Query: 490   atgtcccagtccccgaacgccggcaccgtcatccac 525
             ||||||||||||||||||||||||||||||||||||
Sbjct: 10500 atgtcccagtccccgaacgccggcaccgtcatccac 10535



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 207  tcttcaggccttgatacagcactggaaatagctcaggaacctcttccttcc 257
            |||||||||||| |||||||||||||| |||||||| ||| || |||||||
Sbjct: 8475 tcttcaggccttaatacagcactggaagtagctcagaaacgtcctccttcc 8525
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Plus

                                                                           
Query: 370     tgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgc 429
               |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3731867 tgggcgaggaggtcgtcgtcgccgccgaggctggtgcgggagagctccttcttgttctgc 3731926

                                                                           
Query: 430     ttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttc 489
               || |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 3731927 ttccgcatctcgcggatcttggagaaatccatggagtagtccggcagcgcgccgttcttc 3731986

                                                   
Query: 490     atgtcccagtccccgaacgccggcaccgtcatccac 525
               ||||||||||||||||||||||||||||||||||||
Sbjct: 3731987 atgtcccagtccccgaacgccggcaccgtcatccac 3732022



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 207     tcttcaggccttgatacagcactggaaatagctcaggaacctcttccttcc 257
               |||||||||||| |||||||||||||| |||||||| ||| || |||||||
Sbjct: 3729962 tcttcaggccttaatacagcactggaagtagctcagaaacgtcctccttcc 3730012
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>dbj|AK063222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-E07, full
           insert sequence
          Length = 601

 Score =  262 bits (132), Expect = 1e-66
 Identities = 150/156 (96%)
 Strand = Plus / Minus

                                                                       
Query: 370 tgggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgc 429
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 197 tgggcgaggaggtcgtcgtcgccgccgaggctggtgcgggagagctccttcttgttctgc 138

                                                                       
Query: 430 ttgcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttc 489
           || |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||
Sbjct: 137 ttccgcatctcgcggatcttggagaaatccatggagtagtccggcagcgcgccgttcttc 78

                                               
Query: 490 atgtcccagtccccgaacgccggcaccgtcatccac 525
           ||||||||||||||||||||||||||||||||||||
Sbjct: 77  atgtcccagtccccgaacgccggcaccgtcatccac 42



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 207 tcttcaggccttgatacagcactggaaatagctcaggaacctcttccttccggtgggcga 266
           |||||||||||| |||||||||||||| |||||||| ||| || ||||||| || |||||
Sbjct: 360 tcttcaggccttaatacagcactggaagtagctcagaaacgtcctccttcccgtcggcga 301

                             
Query: 267 gtcgtcgcggccgtggag 284
           | ||| |||||| |||||
Sbjct: 300 gccgtggcggccatggag 283
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>ref|NM_196413.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0044I14.2), mRNA
          Length = 453

 Score =  250 bits (126), Expect = 4e-63
 Identities = 147/154 (95%)
 Strand = Plus / Minus

                                                                       
Query: 372 ggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgctt 431
           |||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 204 ggcgaggaggtcgtcgtccccgccgaggctggcgcgggagagctcgcgcttgttctgctt 145

                                                                       
Query: 432 gcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttcat 491
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 144 gcgcatctcccggatcttggagaagtccatggagtagtccggcaccgcgccgttcttcat 85

                                             
Query: 492 gtcccagtccccgaacgccggcaccgtcatccac 525
           |||||| |||||||||||||||||||||||||||
Sbjct: 84  gtcccactccccgaacgccggcaccgtcatccac 51
to top
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0044A10, from chromosome 10, complete sequence
          Length = 173374

 Score =  250 bits (126), Expect = 4e-63
 Identities = 147/154 (95%)
 Strand = Plus / Minus

                                                                          
Query: 372    ggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgctt 431
              |||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 164892 ggcgaggaggtcgtcgtccccgccgaggctggcgcgggagagctcgcgcttgttctgctt 164833

                                                                          
Query: 432    gcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttcat 491
              ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 164832 gcgcatctcccggatcttggagaagtccatggagtagtccggcaccgcgccgttcttcat 164773

                                                
Query: 492    gtcccagtccccgaacgccggcaccgtcatccac 525
              |||||| |||||||||||||||||||||||||||
Sbjct: 164772 gtcccactccccgaacgccggcaccgtcatccac 164739



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 207    tcttcaggccttgatacagcactggaaatagctcaggaacctcttcct 254
              |||||||||  |||||||||||||||||||||| |||||| |||||||
Sbjct: 166872 tcttcaggctctgatacagcactggaaatagctaaggaacttcttcct 166825
to top
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0044I14, from Chromosome 10, complete sequence
          Length = 63167

 Score =  250 bits (126), Expect = 4e-63
 Identities = 147/154 (95%)
 Strand = Plus / Plus

                                                                         
Query: 372   ggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgctt 431
             |||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 11650 ggcgaggaggtcgtcgtccccgccgaggctggcgcgggagagctcgcgcttgttctgctt 11709

                                                                         
Query: 432   gcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttcat 491
             ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 11710 gcgcatctcccggatcttggagaagtccatggagtagtccggcaccgcgccgttcttcat 11769

                                               
Query: 492   gtcccagtccccgaacgccggcaccgtcatccac 525
             |||||| |||||||||||||||||||||||||||
Sbjct: 11770 gtcccactccccgaacgccggcaccgtcatccac 11803



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                            
Query: 207  tcttcaggccttgatacagcactggaaatagctcaggaacctcttcct 254
            |||||||||  |||||||||||||||||||||| |||||| |||||||
Sbjct: 9670 tcttcaggctctgatacagcactggaaatagctaaggaacttcttcct 9717
to top
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060A14, from chromosome 10, complete sequence
          Length = 151343

 Score =  250 bits (126), Expect = 4e-63
 Identities = 147/154 (95%)
 Strand = Plus / Minus

                                                                         
Query: 372   ggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgctt 431
             |||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 11020 ggcgaggaggtcgtcgtccccgccgaggctggcgcgggagagctcgcgcttgttctgctt 10961

                                                                         
Query: 432   gcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttcat 491
             ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 10960 gcgcatctcccggatcttggagaagtccatggagtagtccggcaccgcgccgttcttcat 10901

                                               
Query: 492   gtcccagtccccgaacgccggcaccgtcatccac 525
             |||||| |||||||||||||||||||||||||||
Sbjct: 10900 gtcccactccccgaacgccggcaccgtcatccac 10867



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 207   tcttcaggccttgatacagcactggaaatagctcaggaacctcttcct 254
             |||||||||  |||||||||||||||||||||| |||||| |||||||
Sbjct: 13000 tcttcaggctctgatacagcactggaaatagctaaggaacttcttcct 12953
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  250 bits (126), Expect = 4e-63
 Identities = 147/154 (95%)
 Strand = Plus / Minus

                                                                            
Query: 372      ggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgctt 431
                |||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 13318643 ggcgaggaggtcgtcgtccccgccgaggctggcgcgggagagctcgcgcttgttctgctt 13318584

                                                                            
Query: 432      gcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttcat 491
                ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 13318583 gcgcatctcccggatcttggagaagtccatggagtagtccggcaccgcgccgttcttcat 13318524

                                                  
Query: 492      gtcccagtccccgaacgccggcaccgtcatccac 525
                |||||| |||||||||||||||||||||||||||
Sbjct: 13318523 gtcccactccccgaacgccggcaccgtcatccac 13318490



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                                
Query: 207      tcttcaggccttgatacagcactggaaatagctcaggaacctcttcct 254
                |||||||||  |||||||||||||||||||||| |||||| |||||||
Sbjct: 13320623 tcttcaggctctgatacagcactggaaatagctaaggaacttcttcct 13320576



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 372      ggcgaggaggtcgtcgtcgccgc 394
                |||||||||||||||||||||||
Sbjct: 13939780 ggcgaggaggtcgtcgtcgccgc 13939758



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 404     cgcgggagagctccttcttgt 424
               |||||||||||||||||||||
Sbjct: 8521699 cgcgggagagctccttcttgt 8521679
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  250 bits (126), Expect = 4e-63
 Identities = 147/154 (95%)
 Strand = Plus / Minus

                                                                            
Query: 372      ggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgctt 431
                |||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 13325983 ggcgaggaggtcgtcgtccccgccgaggctggcgcgggagagctcgcgcttgttctgctt 13325924

                                                                            
Query: 432      gcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttcat 491
                ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 13325923 gcgcatctcccggatcttggagaagtccatggagtagtccggcaccgcgccgttcttcat 13325864

                                                  
Query: 492      gtcccagtccccgaacgccggcaccgtcatccac 525
                |||||| |||||||||||||||||||||||||||
Sbjct: 13325863 gtcccactccccgaacgccggcaccgtcatccac 13325830



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                                
Query: 207      tcttcaggccttgatacagcactggaaatagctcaggaacctcttcct 254
                |||||||||  |||||||||||||||||||||| |||||| |||||||
Sbjct: 13327963 tcttcaggctctgatacagcactggaaatagctaaggaacttcttcct 13327916



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 372      ggcgaggaggtcgtcgtcgccgc 394
                |||||||||||||||||||||||
Sbjct: 13947122 ggcgaggaggtcgtcgtcgccgc 13947100



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 404     cgcgggagagctccttcttgt 424
               |||||||||||||||||||||
Sbjct: 8526798 cgcgggagagctccttcttgt 8526778
to top
>dbj|AK066928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091H23, full
           insert sequence
          Length = 861

 Score =  242 bits (122), Expect = 1e-60
 Identities = 146/154 (94%)
 Strand = Plus / Minus

                                                                       
Query: 372 ggcgaggaggtcgtcgtcgccgccgaggctggcgcgggagagctccttcttgttctgctt 431
           |||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||
Sbjct: 378 ggcgaggaggtcgtcgtccccgccgaggctggcgcgggagagctcgcgcttgttctgctt 319

                                                                       
Query: 432 gcgcatctcccggatcttggagaagtccatggagtagtccggcatggcgccgttcttcat 491
           |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||
Sbjct: 318 gcgcatctcccggatcttggaggagtccatggagtagtccggcaccgcgccgttcttcat 259

                                             
Query: 492 gtcccagtccccgaacgccggcaccgtcatccac 525
           |||||| |||||||||||||||||||||||||||
Sbjct: 258 gtcccactccccgaacgccggcaccgtcatccac 225



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Minus

                                                                 
Query: 220 atacagcactggaaatagctcaggaacctcttccttccggtgggcgagtcgtcg 273
           |||||||||||||||||||| |||||| ||||||| || |||||||||||||||
Sbjct: 521 atacagcactggaaatagctaaggaacttcttcctccccgtgggcgagtcgtcg 468
to top
>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0007P22, complete sequence
          Length = 148068

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 442   cggatcttggagaagtccatggagtagtccggca 475
             ||||||||||||||||| | ||||||||||||||
Sbjct: 80437 cggatcttggagaagtcgagggagtagtccggca 80404
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 442      cggatcttggagaagtccatggagtagtccggca 475
                ||||||||||||||||| | ||||||||||||||
Sbjct: 22372379 cggatcttggagaagtcgagggagtagtccggca 22372412
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 442      cggatcttggagaagtccatggagtagtccggca 475
                ||||||||||||||||| | ||||||||||||||
Sbjct: 22682290 cggatcttggagaagtcgagggagtagtccggca 22682323
to top
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 372    ggcgaggaggtcgtcgtcgccgc 394
              |||||||||||||||||||||||
Sbjct: 108406 ggcgaggaggtcgtcgtcgccgc 108384
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 507     cgccggcaccgtcatccacgccgtcgc 533
               |||||||||||||||||||||| ||||
Sbjct: 3653710 cgccggcaccgtcatccacgccatcgc 3653684
to top
>gb|AF411804.1| Lycopersicon esculentum BAC clone Clemson_ID 47I13, complete sequence
          Length = 100810

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 240   caggaacctcttccttccggtg 261
             ||||||||||||||||||||||
Sbjct: 62287 caggaacctcttccttccggtg 62266
to top
>gb|L43074.1|STMFABD Streptomyces glaucescens fabD, fabH, fabC, fabB, and ORF5 genes,
            complete cds
          Length = 4558

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 378  gaggtcgtcgtcgccgccgagg 399
            ||||||||||||||||||||||
Sbjct: 2256 gaggtcgtcgtcgccgccgagg 2277
to top
>ref|XM_482868.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1811

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 404 cgcgggagagctccttcttgt 424
           |||||||||||||||||||||
Sbjct: 766 cgcgggagagctccttcttgt 786
to top
>ref|XM_482867.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2751

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  cgcgggagagctccttcttgt 424
            |||||||||||||||||||||
Sbjct: 2014 cgcgggagagctccttcttgt 1994
to top
>ref|XM_482864.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1811

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 404 cgcgggagagctccttcttgt 424
           |||||||||||||||||||||
Sbjct: 766 cgcgggagagctccttcttgt 786
to top
>ref|XM_482863.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3147

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  cgcgggagagctccttcttgt 424
            |||||||||||||||||||||
Sbjct: 2134 cgcgggagagctccttcttgt 2114
to top
>ref|XM_480923.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1247

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 372 ggcgaggaggtcgtcgtcgccgccg 396
           ||||| |||||||||||||||||||
Sbjct: 734 ggcgaagaggtcgtcgtcgccgccg 710
to top
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01,
             complete sequence
          Length = 164709

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 380   ggtcgtcgtcgccgccgaggc 400
             |||||||||||||||||||||
Sbjct: 45890 ggtcgtcgtcgccgccgaggc 45910
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 370     tgggcgaggaggtcgtcgtcg 390
               |||||||||||||||||||||
Sbjct: 2246300 tgggcgaggaggtcgtcgtcg 2246280
to top
>emb|AL844847.6| Zebrafish DNA sequence from clone DKEY-13A21 in linkage group 11 Contains
              three novel genes, the opn1lw1 gene for opsin 1 (cone
              pigments), long-wave-sensitive, 1, a gene for novel protein
              similar to human and rodent member RAS oncogene family RAB7
              (RAB7), a gene for novel protein remotely similar to human
              host cell factor 1 (VP16-accessory protein) (HCFC1), the
              opn1sw2 gene for opsin 1 (cone pigments),
              short-wave-sensitive 1, a gene for novel protein similar to
              human and mouse CpG binding protein (CGBP), a gene for
              novel protein similar to vertebrate
              microphthalmia-associated transcription factor (MITF) and
              zebrafish transcription factor binding to IGHM enhancer 3a
              (tfe3a), a gene for novel protein similar to human and
              rodent catechol-O-methyltransferase (COMT), the flj10613l
              gene for hypothetical protein FLJ10613-like (H. sapiens), a
              gene for novel protein similar to human and mouse
              methyl-CpG binding domain protein 1 (MBD1), a gene for
              novel protein similar to zebrafish red-sensitive opsin
              (rdops), a gene for novel protein similar to mouse and
              human host cell factor C1 (VP16-accessory protein) (HCFC1),
              a gene for novel protein similar to human and rodent
              metabotropic glutamate receptors (GRM) and two CpG islands,
              complete sequence
          Length = 235174

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    cattcacttgttgcaaacttg 145
              |||||||||||||||||||||
Sbjct: 180442 cattcacttgttgcaaacttg 180462
to top
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
              complete sequence
          Length = 186325

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    ggcgagtcgtcgcggccgtgg 282
              |||||||||||||||||||||
Sbjct: 129349 ggcgagtcgtcgcggccgtgg 129369
to top
>emb|AJ224512.2|SNO224512 Streptomyces nogalater nogalamycin biosynthesis genes
          Length = 19632

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 278   cgtggagcgggccgtggtctt 298
             |||||||||||||||||||||
Sbjct: 17355 cgtggagcgggccgtggtctt 17335
to top
>emb|AJ006687.1|CCR6687 Caulobacter crescentus major chemotaxis operon
          Length = 7821

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 251  tccttccggtgggcgagtcgtcgcg 275
            |||||||||||||||||| ||||||
Sbjct: 6140 tccttccggtgggcgagttgtcgcg 6164
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 381     gtcgtcgtcgccgccgaggctggcg 405
               ||||||||||||||| |||||||||
Sbjct: 2659732 gtcgtcgtcgccgccaaggctggcg 2659756
to top
>gb|AE005716.1| Caulobacter crescentus CB15 section 42 of 359 of the complete genome
          Length = 10119

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 251  tccttccggtgggcgagtcgtcgcg 275
            |||||||||||||||||| ||||||
Sbjct: 8544 tccttccggtgggcgagttgtcgcg 8568
to top
>gb|AC090486.3| Genomic sequence for  Oryza sativa (japonica cultivar-group) cultivar
            Nipponbare  clone OSJNBa0093I09, from Chromosome 10,
            complete sequence
          Length = 172434

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  cgcgggagagctccttcttgt 424
            |||||||||||||||||||||
Sbjct: 2796 cgcgggagagctccttcttgt 2776
to top
>gb|AC148693.1| Macaca mulatta Major Histocompatibility Complex BAC MMU240D05, complete
              sequence
          Length = 161692

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 140    aacttgaccaaacaccaaagaagcc 164
              ||||||||||| |||||||||||||
Sbjct: 104000 aacttgaccaatcaccaaagaagcc 103976
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 262      ggcgagtcgtcgcggccgtgg 282
                |||||||||||||||||||||
Sbjct: 29456333 ggcgagtcgtcgcggccgtgg 29456353
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 404      cgcgggagagctccttcttgt 424
                |||||||||||||||||||||
Sbjct: 23045445 cgcgggagagctccttcttgt 23045465



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 404      cgcgggagagctccttcttgt 424
                |||||||||||||||||||||
Sbjct: 23030252 cgcgggagagctccttcttgt 23030232



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 372     ggcgaggaggtcgtcgtcgccgccg 396
               ||||| |||||||||||||||||||
Sbjct: 8633684 ggcgaagaggtcgtcgtcgccgccg 8633708



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gaggtcgtcgtcgccgccga 397
               ||||||||||||||||||||
Sbjct: 3683920 gaggtcgtcgtcgccgccga 3683901
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 380      ggtcgtcgtcgccgccgaggc 400
                |||||||||||||||||||||
Sbjct: 18878512 ggtcgtcgtcgccgccgaggc 18878532
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 372     ggcgaggaggtcgtcgtcgccgccg 396
               |||||||||||||||||||| ||||
Sbjct: 1919568 ggcgaggaggtcgtcgtcgctgccg 1919592



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     gaggtcgtcgtcgccgccga 397
               ||||||||||||||||||||
Sbjct: 6991633 gaggtcgtcgtcgccgccga 6991614
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 379     aggtcgtcgtcgccgccgagg 399
               |||||||||||||||||||||
Sbjct: 1552151 aggtcgtcgtcgccgccgagg 1552171
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 257     cggtgggcgagtcgtcgcggc 277
               |||||||||||||||||||||
Sbjct: 2127401 cggtgggcgagtcgtcgcggc 2127381
to top
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0087F21
          Length = 187401

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 372    ggcgaggaggtcgtcgtcgccgccg 396
              ||||| |||||||||||||||||||
Sbjct: 145595 ggcgaagaggtcgtcgtcgccgccg 145619
to top
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 404    cgcgggagagctccttcttgt 424
              |||||||||||||||||||||
Sbjct: 105173 cgcgggagagctccttcttgt 105193



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 404   cgcgggagagctccttcttgt 424
             |||||||||||||||||||||
Sbjct: 89980 cgcgggagagctccttcttgt 89960
to top
>dbj|AK121810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098A20, full
            insert sequence
          Length = 3147

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  cgcgggagagctccttcttgt 424
            |||||||||||||||||||||
Sbjct: 2134 cgcgggagagctccttcttgt 2114
to top
>dbj|AK110377.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C08, full
            insert sequence
          Length = 2609

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 380  ggtcgtcgtcgccgccgaggc 400
            |||||||||||||||||||||
Sbjct: 2035 ggtcgtcgtcgccgccgaggc 2015
to top
>dbj|AK107363.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-A08, full
           insert sequence
          Length = 1811

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 404 cgcgggagagctccttcttgt 424
           |||||||||||||||||||||
Sbjct: 766 cgcgggagagctccttcttgt 786
to top
>dbj|AK107305.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-D01, full
           insert sequence
          Length = 1247

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 372 ggcgaggaggtcgtcgtcgccgccg 396
           ||||| |||||||||||||||||||
Sbjct: 734 ggcgaagaggtcgtcgtcgccgccg 710
to top
>dbj|AK102363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091J17, full
            insert sequence
          Length = 2361

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  cgcgggagagctccttcttgt 424
            |||||||||||||||||||||
Sbjct: 1391 cgcgggagagctccttcttgt 1371
to top
>dbj|AK101662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057L03, full
           insert sequence
          Length = 1970

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 404 cgcgggagagctccttcttgt 424
           |||||||||||||||||||||
Sbjct: 878 cgcgggagagctccttcttgt 858
to top
>emb|X15820.1|OSNIA134 Oryza sativa partial nia1 gene for nitrate reductase apoenzyme, exons
            3-4
          Length = 2000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  cgcgggagagctccttcttgt 424
            |||||||||||||||||||||
Sbjct: 1048 cgcgggagagctccttcttgt 1028
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 513     caccgtcatccacgccgtcgc 533
               |||||||||||||||||||||
Sbjct: 1906486 caccgtcatccacgccgtcgc 1906466



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 374    cgaggaggtcgtcgtcgccgccgag 398
              |||| ||||||||||||||||||||
Sbjct: 846829 cgagcaggtcgtcgtcgccgccgag 846805



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 399     gctggcgcgggagagctcct 418
               ||||||||||||||||||||
Sbjct: 2805059 gctggcgcgggagagctcct 2805078
to top
>gb|AY579780.1| Avian pneumovirus from USA, complete genome
          Length = 13134

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  tcatgctggcagcagttggt 207
            ||||||||||||||||||||
Sbjct: 4542 tcatgctggcagcagttggt 4561
to top
>ref|XM_465635.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 747

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 ggaggtcgtcgtcgccgccg 396
           ||||||||||||||||||||
Sbjct: 495 ggaggtcgtcgtcgccgccg 476
to top
>ref|XM_366349.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG10567.4) partial mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 tggtgggcgaggaggtcgtc 386
           ||||||||||||||||||||
Sbjct: 963 tggtgggcgaggaggtcgtc 982
to top
>gb|BC052065.1| Mus musculus Rap1 GTPase-activating protein, mRNA (cDNA clone
            MGC:62462 IMAGE:5708181), complete cds
          Length = 3215

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  gtcgtcgtcgccgccgaggc 400
            ||||||||||||||||||||
Sbjct: 1456 gtcgtcgtcgccgccgaggc 1437
to top
>gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194848

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    cttggagaagtccatggagt 466
              ||||||||||||||||||||
Sbjct: 109910 cttggagaagtccatggagt 109891
to top
>ref|XM_979077.1| PREDICTED: Mus musculus Rap1, GTPase-activating protein 1 (Rap1ga1),
            mRNA
          Length = 3230

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  gtcgtcgtcgccgccgaggc 400
            ||||||||||||||||||||
Sbjct: 1461 gtcgtcgtcgccgccgaggc 1442
to top
>ref|XM_149500.8| PREDICTED: Mus musculus Rap1, GTPase-activating protein 1, transcript
            variant 1 (Rap1ga1), mRNA
          Length = 3218

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  gtcgtcgtcgccgccgaggc 400
            ||||||||||||||||||||
Sbjct: 1449 gtcgtcgtcgccgccgaggc 1430
to top
>ref|XM_741713.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g01260) partial
            mRNA
          Length = 1782

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 424  ttctgcttgcgcatctcccg 443
            ||||||||||||||||||||
Sbjct: 1220 ttctgcttgcgcatctcccg 1201
to top
>gb|AY337138.1| Uncultured sulfate-reducing bacterium clone M300087 dissimilatory
           sulfite reductase subunits alpha and beta (dsrAB) gene,
           partial sequence
          Length = 1264

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 510 cggcaccgtcatccacgccg 529
           ||||||||||||||||||||
Sbjct: 57  cggcaccgtcatccacgccg 76
to top
>gb|DQ148256.1| Macaca mulatta clone ss1_e15_t7_495 3' UTR
          Length = 279

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 gagcttggtgggctgggggg 331
           ||||||||||||||||||||
Sbjct: 100 gagcttggtgggctgggggg 81
to top
>gb|DQ148245.1| Macaca mulatta clone ss1_m08_t7_482 3' UTR
          Length = 280

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 gagcttggtgggctgggggg 331
           ||||||||||||||||||||
Sbjct: 98  gagcttggtgggctgggggg 79
to top
>gb|DQ148175.1| Macaca mulatta clone ss1_c16_t7_392 3' UTR
          Length = 279

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 gagcttggtgggctgggggg 331
           ||||||||||||||||||||
Sbjct: 186 gagcttggtgggctgggggg 205
to top
>gb|AC164100.2| Mus musculus BAC clone RP23-11E1 from chromosome 14, complete sequence
          Length = 214128

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     caagattgtaccttgacatt 49
              ||||||||||||||||||||
Sbjct: 213791 caagattgtaccttgacatt 213772
to top
>emb|X86475.1|SCDNAFABD S.coelicolor fabD, fabH, and acpP genes
          Length = 2525

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  gaggtcgtcgtcgccgccga 397
            ||||||||||||||||||||
Sbjct: 2350 gaggtcgtcgtcgccgccga 2369
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    gaggtcgtcgtcgccgccga 397
              ||||||||||||||||||||
Sbjct: 138378 gaggtcgtcgtcgccgccga 138397
to top
>gb|AE011971.1| Xanthomonas axonopodis pv. citri str. 306,  section 349 of 469 of the
            complete genome
          Length = 11634

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 420  cttgttctgcttgcgcatctcccg 443
            |||||||| |||||||||||||||
Sbjct: 9793 cttgttcttcttgcgcatctcccg 9770
to top
>ref|NM_134301.3| Drosophila melanogaster caudal CG1759-RB, transcript variant B (cad),
            mRNA
          Length = 2227

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ccttcttgttctgcttgcgc 435
            ||||||||||||||||||||
Sbjct: 1217 ccttcttgttctgcttgcgc 1198
to top
>ref|NM_057606.4| Drosophila melanogaster caudal CG1759-RA, transcript variant A (cad),
            mRNA
          Length = 2519

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ccttcttgttctgcttgcgc 435
            ||||||||||||||||||||
Sbjct: 1376 ccttcttgttctgcttgcgc 1357
to top
>gb|AY069565.1| Drosophila melanogaster LD29596 full length cDNA
          Length = 2518

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  ccttcttgttctgcttgcgc 435
            ||||||||||||||||||||
Sbjct: 1354 ccttcttgttctgcttgcgc 1335
to top
>gb|L49462.1|NIAMTZB Catenotaenia lobata 12S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 290

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 56  caatttgtctcccacacaaa 75
           ||||||||||||||||||||
Sbjct: 250 caatttgtctcccacacaaa 231
to top
>gb|AF368170.1|AF368170 Avian pneumovirus fusion protein gene, partial cds
          Length = 1596

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  tcatgctggcagcagttggt 207
            ||||||||||||||||||||
Sbjct: 1502 tcatgctggcagcagttggt 1521
to top
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 377   ggaggtcgtcgtcgccgccgaggc 400
             ||||| ||||||||||||||||||
Sbjct: 45813 ggaggccgtcgtcgccgccgaggc 45790
to top
>gb|AC148706.1| Macaca mulatta Major Histocompatibility Complex BAC MMU370O02, complete
             sequence
          Length = 181896

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   cttgaccaaacaccaaagaagcct 165
             ||||||||| ||||||||||||||
Sbjct: 94324 cttgaccaatcaccaaagaagcct 94301
to top
>dbj|AK019076.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310004O14 product:Rap1, GTPase-activating
            protein 1, full insert sequence
          Length = 3181

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 381  gtcgtcgtcgccgccgaggc 400
            ||||||||||||||||||||
Sbjct: 1406 gtcgtcgtcgccgccgaggc 1387
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 374      cgaggaggtcgtcgtcgccg 393
                ||||||||||||||||||||
Sbjct: 24879170 cgaggaggtcgtcgtcgccg 24879189
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 377      ggaggtcgtcgtcgccgccg 396
                ||||||||||||||||||||
Sbjct: 25879577 ggaggtcgtcgtcgccgccg 25879558
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 377      ggaggtcgtcgtcgccgccg 396
                ||||||||||||||||||||
Sbjct: 16496430 ggaggtcgtcgtcgccgccg 16496411



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 377      ggaggtcgtcgtcgccgccg 396
                ||||||||||||||||||||
Sbjct: 16495765 ggaggtcgtcgtcgccgccg 16495746
to top
>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
             BACR07D17, complete sequence
          Length = 173422

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ccttcttgttctgcttgcgc 435
             ||||||||||||||||||||
Sbjct: 51943 ccttcttgttctgcttgcgc 51924
to top
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0072I06
          Length = 162411

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   cgaggaggtcgtcgtcgccg 393
             ||||||||||||||||||||
Sbjct: 62802 cgaggaggtcgtcgtcgccg 62821
to top
>gb|AY590688.1| Avian pneumovirus strain Colorado, complete genome
          Length = 14150

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  tcatgctggcagcagttggt 207
            ||||||||||||||||||||
Sbjct: 4542 tcatgctggcagcagttggt 4561
to top
>gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 216930

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    cttggagaagtccatggagt 466
              ||||||||||||||||||||
Sbjct: 192848 cttggagaagtccatggagt 192829
to top
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ9990_A01
          Length = 101684

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 378  gaggtcgtcgtcgccgccga 397
            ||||||||||||||||||||
Sbjct: 7417 gaggtcgtcgtcgccgccga 7398
to top
>gb|AF187153.1|AF187153 Avian pneumovirus isolate 1b fusion protein mRNA, complete cds
          Length = 1666

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  tcatgctggcagcagttggt 207
            ||||||||||||||||||||
Sbjct: 1515 tcatgctggcagcagttggt 1534
to top
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   ggaggtcgtcgtcgccgccg 396
             ||||||||||||||||||||
Sbjct: 34675 ggaggtcgtcgtcgccgccg 34656
to top
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    ggaggtcgtcgtcgccgccg 396
              ||||||||||||||||||||
Sbjct: 161781 ggaggtcgtcgtcgccgccg 161762
to top
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0493C06
          Length = 158923

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    cgaggaggtcgtcgtcgccg 393
              ||||||||||||||||||||
Sbjct: 113621 cgaggaggtcgtcgtcgccg 113640
to top
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0527E02
          Length = 176826

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   ggaggtcgtcgtcgccgccg 396
             ||||||||||||||||||||
Sbjct: 69845 ggaggtcgtcgtcgccgccg 69826



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   ggaggtcgtcgtcgccgccg 396
             ||||||||||||||||||||
Sbjct: 69180 ggaggtcgtcgtcgccgccg 69161
to top
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    gaggtcgtcgtcgccgccga 397
              ||||||||||||||||||||
Sbjct: 162426 gaggtcgtcgtcgccgccga 162407
to top
>dbj|AK109579.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A03, full
           insert sequence
          Length = 1204

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 374 cgaggaggtcgtcgtcgccg 393
           ||||||||||||||||||||
Sbjct: 935 cgaggaggtcgtcgtcgccg 954
to top
>dbj|AK059777.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B01, full
           insert sequence
          Length = 948

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 ggaggtcgtcgtcgccgccg 396
           ||||||||||||||||||||
Sbjct: 73  ggaggtcgtcgtcgccgccg 54
to top
>gb|AF085228.1|AF085228 Avian pneumovirus matrix protein (M) gene, partial cds; and fusion
            glycoprotein (F) gene, complete cds
          Length = 1860

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  tcatgctggcagcagttggt 207
            ||||||||||||||||||||
Sbjct: 1717 tcatgctggcagcagttggt 1736
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>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
             sequence
          Length = 270158

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ccttcttgttctgcttgcgc 435
             ||||||||||||||||||||
Sbjct: 41757 ccttcttgttctgcttgcgc 41738
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>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11,
              complete sequence
          Length = 230267

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    attcacttgttgcaaacttg 145
              ||||||||||||||||||||
Sbjct: 188480 attcacttgttgcaaacttg 188461
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>emb|AJ318065.1|PVI318065 Pseudorabies virus ul39 gene (partial), ul36 gene, ul37 gene and ul38
            gene (partial)
          Length = 6126

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 377  ggaggtcgtcgtcgccgccgaggc 400
            ||||| ||||||||||||||||||
Sbjct: 1757 ggaggccgtcgtcgccgccgaggc 1780
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>emb|X80797.1|PVPCA Pseudorabies Virus genomic DNA
          Length = 5657

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 377  ggaggtcgtcgtcgccgccgaggc 400
            ||||| ||||||||||||||||||
Sbjct: 1452 ggaggccgtcgtcgccgccgaggc 1429
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>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   ccttcttgttctgcttgcgc 435
             ||||||||||||||||||||
Sbjct: 37594 ccttcttgttctgcttgcgc 37613
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>gb|AC134987.5| Mus musculus BAC clone RP23-117E24 from 14, complete sequence
          Length = 196751

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  caagattgtaccttgacatt 49
           ||||||||||||||||||||
Sbjct: 283 caagattgtaccttgacatt 264
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>emb|AL805954.9| Mouse DNA sequence from clone RP23-277N22 on chromosome 4, complete
             sequence
          Length = 127548

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   gtcgtcgtcgccgccgaggc 400
             ||||||||||||||||||||
Sbjct: 99013 gtcgtcgtcgccgccgaggc 98994


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,858,629
Number of Sequences: 3902068
Number of extensions: 3858629
Number of successful extensions: 83499
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81554
Number of HSP's gapped (non-prelim): 1945
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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