ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61p02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl... 193 2e-49
2PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl... 192 6e-49
3PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl... 191 8e-49
4PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl... 190 2e-48
5PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor... 187 1e-47
6PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl... 187 2e-47
7PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas... 187 2e-47
8PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor... 187 2e-47
9PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl... 184 1e-46
10PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl... 147 1e-35
11PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl... 144 2e-34
12PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl... 142 8e-34
13PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep... 121 1e-27
14PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypep... 117 2e-26
15PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep... 110 2e-24
16PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep... 110 2e-24
17PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypep... 110 3e-24
18PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypep... 106 4e-23
19PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (3... 40 0.003
20CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES pro... 34 0.22
21MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog 31 1.9
22DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta... 31 2.5
23MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial pre... 30 4.2
24LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA 30 5.5
25RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Prote... 29 7.2
26BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead) 29 7.2
27MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial p... 29 7.2
28RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B) 29 7.2
29PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-... 29 7.2
30EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi 29 9.3
31ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86) (A... 29 9.3

>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  193 bits (491), Expect = 2e-49
 Identities = 94/101 (93%), Positives = 97/101 (96%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN SSSTG ITLSVT+
Sbjct: 232 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQ 291

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
           SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE
Sbjct: 292 SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332



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>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  192 bits (487), Expect = 6e-49
 Identities = 98/103 (95%), Positives = 99/103 (96%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGDEEELAKENVKNASSSTGNITLSVTK
Sbjct: 225 LVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTK 284

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 170
           SKPETGEVIGVFESVQPSDTDL  +APKDVKIQGVWYAQLESN
Sbjct: 285 SKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLESN 325



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>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  191 bits (486), Expect = 8e-49
 Identities = 92/101 (91%), Positives = 97/101 (96%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRGDEEEL KEN+K+ SSSTG ITLSVTK
Sbjct: 229 LVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTK 288

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
           SKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+WYAQLE
Sbjct: 289 SKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329



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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  190 bits (482), Expect = 2e-48
 Identities = 92/101 (91%), Positives = 96/101 (95%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN +S TG ITLSVT+
Sbjct: 229 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQ 288

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
           SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE
Sbjct: 289 SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329



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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  187 bits (476), Expect = 1e-47
 Identities = 91/101 (90%), Positives = 94/101 (93%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN ++S G ITL VTK
Sbjct: 232 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTK 291

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
           SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY QLE
Sbjct: 292 SKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332



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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  187 bits (475), Expect = 2e-47
 Identities = 90/102 (88%), Positives = 95/102 (93%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KENVKN +S TG IT +VTK
Sbjct: 232 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTK 291

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 173
           S P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLES
Sbjct: 292 SNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333



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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  187 bits (475), Expect = 2e-47
 Identities = 92/102 (90%), Positives = 97/102 (95%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRG STGYDNAVALPAGGRGDEEEL KEN K+A+SS G ITLSVT+
Sbjct: 228 LVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQ 287

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 173
           +KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGVWYAQLES
Sbjct: 288 TKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329



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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  187 bits (474), Expect = 2e-47
 Identities = 89/101 (88%), Positives = 95/101 (94%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL+KENVKN ++S G ITL +TK
Sbjct: 231 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITK 290

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
           SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGVWY Q+E
Sbjct: 291 SKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331



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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  184 bits (467), Expect = 1e-46
 Identities = 90/101 (89%), Positives = 94/101 (93%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL KEN KN +SS G ITLSVT 
Sbjct: 230 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTS 289

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
           SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GVWYAQLE
Sbjct: 290 SKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330



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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score =  147 bits (372), Expect = 1e-35
 Identities = 73/101 (72%), Positives = 81/101 (80%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           LVPSYRGSSFLDPKGRGGSTGYDNAVALPA  R D EEL KENVK   +  G+   SV K
Sbjct: 193 LVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAK 250

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
             P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+
Sbjct: 251 VDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291



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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score =  144 bits (363), Expect = 2e-34
 Identities = 71/100 (71%), Positives = 79/100 (79%)
 Frame = -2

Query: 478 LVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTK 299
           +VPSYRGSSFLDPKGRGGSTGYDNAVALPA  R D EEL KENVK+  +  G+   SV K
Sbjct: 194 VVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAK 251

Query: 298 SKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 179
               TGE+ GVFES+QPSDTDLGAK PKD+KI G+WY QL
Sbjct: 252 VNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291



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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score =  142 bits (357), Expect = 8e-34
 Identities = 67/99 (67%), Positives = 79/99 (79%)
 Frame = -2

Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296
           VPSYRG++FLDPKGRGG++GYD AVALPA G  D+EE AKEN K+ ++S G I   V K 
Sbjct: 238 VPSYRGATFLDPKGRGGASGYDTAVALPASG--DDEEYAKENSKSTAASVGTIAFKVAKV 295

Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 179
             ETGE+ GVFES+QPSDTDLGAK PKD+K  GVWYAQ+
Sbjct: 296 NAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334



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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score =  121 bits (304), Expect = 1e-27
 Identities = 59/100 (59%), Positives = 76/100 (76%)
 Frame = -2

Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296
           VPSYRG++FLDPKGRG  +GYDNAVALPA  + D+E+L + NVK A    G I+L + K 
Sbjct: 176 VPSYRGAAFLDPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKV 233

Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
              +GE+ G FES QPSDTDLGA  PK+VKI+G++YA++E
Sbjct: 234 DSSSGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273



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>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 275

 Score =  117 bits (293), Expect = 2e-26
 Identities = 61/99 (61%), Positives = 76/99 (76%)
 Frame = -2

Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296
           VPSYRG++FLDPKGRG +TGYDNAVALPA    D+E+ A  NVK      G+I+L VTK 
Sbjct: 177 VPSYRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKV 232

Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 179
              TGE+ GVF+S QPSDTDLGAK P +VKI+G++YA++
Sbjct: 233 DQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271



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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  110 bits (276), Expect = 2e-24
 Identities = 57/100 (57%), Positives = 73/100 (73%)
 Frame = -2

Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296
           VPSYR ++FLDPKGRG ++GYD+A+ALP   +  EEELA+ NVK  S + G I+L+V K 
Sbjct: 174 VPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKV 230

Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
              TGE+ G FES Q SD D+GA  P +VKIQGV+YA +E
Sbjct: 231 DGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270



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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  110 bits (276), Expect = 2e-24
 Identities = 57/100 (57%), Positives = 73/100 (73%)
 Frame = -2

Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296
           VPSYR ++FLDPKGRG ++GYD+A+ALP   +  EEELA+ NVK  S + G I+L+V K 
Sbjct: 174 VPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKV 230

Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
              TGE+ G FES Q SD D+GA  P +VKIQGV+YA +E
Sbjct: 231 DGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270



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>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 277

 Score =  110 bits (274), Expect = 3e-24
 Identities = 55/100 (55%), Positives = 73/100 (73%)
 Frame = -2

Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296
           VPSYR S+FLDPK RG +TGY++AVA+P+ G  D E+L KENVK   +  G I+L+V+K 
Sbjct: 176 VPSYRTSNFLDPKARGLTTGYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLAVSKV 233

Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 176
              TGEV GVF ++QPSDTD+G K   DVK+ G +Y ++E
Sbjct: 234 DGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273



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>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 274

 Score =  106 bits (265), Expect = 4e-23
 Identities = 52/102 (50%), Positives = 70/102 (68%)
 Frame = -2

Query: 475 VPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKS 296
           VPSYRG+ FLDPK RG  TGYDNAVALP+       +  + N K      G ++L VT+ 
Sbjct: 177 VPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQV 231

Query: 295 KPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 170
              TGE+ G+FES QPSDTDLGAK P DVK++G++Y +++++
Sbjct: 232 DGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273



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>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit|
           of oxygen evolving system of photosystem II) (33 kDa
           thylakoid membrane protein) (Fragments)
          Length = 26

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -2

Query: 439 KGRGGSTGYDNAVALPAGGR 380
           + +GGSTGYDNAVALPAGGR
Sbjct: 7   QSKGGSTGYDNAVALPAGGR 26



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>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 94

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = -2

Query: 364 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 203
           +AKE  K      G +  SV K KP+TGEVI V E       + G K P +VKI
Sbjct: 13  VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60



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>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog|
          Length = 241

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -2

Query: 403 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 227
           V   A G   EEE A+   K      G + L  T SKP+  EVIG FES VQ      GA
Sbjct: 72  VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129

Query: 226 KAP 218
            AP
Sbjct: 130 VAP 132



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>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 2)
          Length = 662

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 385 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 251
           G+  E   + +N+KN+     NI    T S PET E+I     +Q
Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449



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>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1)
          Length = 373

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 253 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 122
           QP    +     KD+K++G W +Q + N S  E K  ILI C  IR
Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336



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>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA|
          Length = 598

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +3

Query: 129 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 308
           +A ++ IFT   +  D        W++ ++  +    V D  TL++ P   P+ G   V 
Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292

Query: 309 LRV---MLPVEEDAFFTF 353
            +V   + PV  D +  F
Sbjct: 293 PQVYAGLFPVSSDDYEAF 310



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>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)|
          Length = 536

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = -2

Query: 463 RGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNITLSVTK 299
           R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   IT  + +
Sbjct: 435 RVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEE 494

Query: 298 SKP 290
             P
Sbjct: 495 PMP 497



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>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)|
          Length = 644

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +3

Query: 69  YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 248
           Y H     S ++ PP  P +  Q+M+  TS+     ++     PW  +S  A+ P + S 
Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528

Query: 249 GCTLSKTPITSPVSGLL 299
             + S +  +SP + ++
Sbjct: 529 ASSSSSSSASSPAAAVV 545



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>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38)
          Length = 373

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 253 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 128
           QP    +     KD+K++G W +Q + N S  E K LI   C
Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332



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>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)|
          Length = 560

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = -2

Query: 463 RGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNITLSVTK 299
           R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   IT  + +
Sbjct: 435 RVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEE 494

Query: 298 SKP 290
             P
Sbjct: 495 PMP 497



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>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing|
           protein 8)
          Length = 687

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
 Frame = -2

Query: 463 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 284
           RGS+F      GG  G   A    AGG G  +  A +  K+A S       S ++  P  
Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514

Query: 283 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 197
            G+ +G  E   P D    T L   A  P  VK+QG
Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550



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>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi|
          Length = 700

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
 Frame = -2

Query: 460 GSSFLDPKGRGG---STGYDNAVALPAGG----RGDEEELAKENVKNASSSTGN 320
           G ++    G GG   STG  N+ + PAGG     G  ++ ++ + +  SSS+GN
Sbjct: 170 GGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGN 223



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>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 330

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = -2

Query: 316 TLSVTKSKPETGEVIGVFESVQPSD 242
           +LSV+K+K E  EV+GV E VQ SD
Sbjct: 52  SLSVSKAKKEGFEVLGVKELVQQSD 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,489,989
Number of Sequences: 219361
Number of extensions: 1090314
Number of successful extensions: 4245
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4234
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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