Clone Name | rbah61o22 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | VPA_BP186 (P41064) Replication gene A protein (GpA) | 28 | 7.7 | 2 | KUP_ACIAD (Q6F793) Probable potassium transport system protein kup | 27 | 10.0 |
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>VPA_BP186 (P41064) Replication gene A protein (GpA)| Length = 694 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 260 GYVNLCRWSGASPESVASGLRGHWGR 183 GY N +W+GASP S L G W R Sbjct: 335 GYRN-SKWNGASPSDTQSYLTGLWAR 359
>KUP_ACIAD (Q6F793) Probable potassium transport system protein kup| Length = 626 Score = 27.3 bits (59), Expect = 10.0 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +2 Query: 50 MNPGLEKMVLSSERLTARANKEFQLRPNRI 139 M+P EK+ +S +R T+ + +Q+ PNR+ Sbjct: 588 MSPWREKLFISMQRNTSPVSDFYQIPPNRV 617 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,340,662 Number of Sequences: 219361 Number of extensions: 550155 Number of successful extensions: 1012 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 997 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1012 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)