Clone Name | rbah61o18 |
---|---|
Clone Library Name | barley_pub |
>gb|AC122331.4| Mus musculus BAC clone RP23-344I7 from chromosome 18, complete sequence Length = 227966 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 321 aacttgttattatagatatgttatag 346 |||||||||||||||||||| ||||| Sbjct: 84320 aacttgttattatagatatggtatag 84295
>emb|BX547939.11| Zebrafish DNA sequence from clone CH211-201M19 in linkage group 19, complete sequence Length = 215708 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 ttattatagatatgttataggt 348 |||||||||||||||||||||| Sbjct: 28448 ttattatagatatgttataggt 28427
>gb|AC112671.25| Mus musculus chromosome 13, clone RP24-299O19, complete sequence Length = 139581 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 atgaacaacaacataacaaca 86 ||||||||||||||||||||| Sbjct: 120047 atgaacaacaacataacaaca 120067
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 aacaacaacataacaacagga 89 ||||||||||||||||||||| Sbjct: 1113437 aacaacaacataacaacagga 1113417
>gb|AC131712.3| Mus musculus BAC clone RP23-193A5 from 17, complete sequence Length = 218758 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 agatacgatcatatgaggta 400 |||||||||||||||||||| Sbjct: 143525 agatacgatcatatgaggta 143506
>emb|AL590405.19| Human DNA sequence from clone RP11-124M24 on chromosome 1 Contains part of a novel gene (KIAA1573), complete sequence Length = 133791 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ccatccaaattttgctcctt 121 |||||||||||||||||||| Sbjct: 107719 ccatccaaattttgctcctt 107738
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 taacttgttattatagatat 339 |||||||||||||||||||| Sbjct: 2325048 taacttgttattatagatat 2325029
>gb|AC161447.6| Mus musculus BAC clone RP24-333C14 from chromosome 17, complete sequence Length = 182569 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 agatacgatcatatgaggta 400 |||||||||||||||||||| Sbjct: 16253 agatacgatcatatgaggta 16234
>emb|BX664715.25| Zebrafish DNA sequence from clone DKEY-83M2 in linkage group 6, complete sequence Length = 231173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgaacaacaacataacaaca 86 |||||||||||||||||||| Sbjct: 229510 tgaacaacaacataacaaca 229529
>gb|AC104235.3| Homo sapiens chromosome 11, clone RP11-12N12, complete sequence Length = 162139 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 ctcccatccaaattttgctccttc 122 ||||||||||||||||||| |||| Sbjct: 53949 ctcccatccaaattttgcttcttc 53972
>gb|AC096921.2| Homo sapiens chromosome 3 clone RP11-1024P17, complete sequence Length = 201412 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 aacaacaacataacaacaggattt 92 |||||||||| ||||||||||||| Sbjct: 54953 aacaacaacaaaacaacaggattt 54976
>gb|AC091629.1|AC091629 Mus musculus chromosome 11 map 11, 64cM, Band E1, complete sequence Length = 161334 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 gtgcggcttcatacagataacgga 146 ||||| |||||||||||||||||| Sbjct: 115311 gtgcgtcttcatacagataacgga 115334
>emb|BX901952.10| Zebrafish DNA sequence from clone DKEY-117P18 in linkage group 20, complete sequence Length = 59133 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 tacagtcatgtggtcggttttctc 422 |||||| ||||||||||||||||| Sbjct: 55153 tacagtgatgtggtcggttttctc 55176
>emb|AL596383.8| Mouse DNA sequence from clone RP23-344E9 on chromosome 11, complete sequence Length = 110676 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gtgcggcttcatacagataacgga 146 ||||| |||||||||||||||||| Sbjct: 100183 gtgcgtcttcatacagataacgga 100160 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,360,075 Number of Sequences: 3902068 Number of extensions: 3360075 Number of successful extensions: 63521 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63480 Number of HSP's gapped (non-prelim): 41 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)