>gb|AY110219.1| Zea mays CL3418_1 mRNA sequence
          Length = 1147

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 515 cctcacctnctccgcgaggtacgggtacaactcacacatctc 556
           |||||||| |||||| ||||| ||||||| ||||||||||||
Sbjct: 411 cctcacctcctccgcaaggtatgggtacagctcacacatctc 452



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 422 cctctgcttcttgatcttctcgtccagcaagcgtgccttgtcgtcgtccatctttccaaa 481
           |||||||||||||||| ||||||||||    || ||||||  ||| || ||| | |||||
Sbjct: 312 cctctgcttcttgatcctctcgtccagtgtacgggccttgctgtcttcgatcatcccaaa 371

                         
Query: 482 ctcccgcttgaaca 495
           ||||||||||||||
Sbjct: 372 ctcccgcttgaaca 385

>ref|XM_468012.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1188

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 364  cctttgtcacctccctggcaaggtcgctgcggtgcagctccaccttcatctgggccaccc 423
            |||| ||||||||| |||  |||||||  ||| ||||| |||||   |||| ||| | ||
Sbjct: 1010 ccttggtcacctccttggtcaggtcgccacggcgcagcaccaccgaaatctcggcaatcc 951

                                      
Query: 424  tctgcttcttgatcttctcgtccagc 449
            |||||||||||||||||  |||||||
Sbjct: 950  tctgcttcttgatcttcatgtccagc 925

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 346     cgatcaggtccatcaccgcctt 367
               ||||||||||||||||||||||
Sbjct: 4623100 cgatcaggtccatcaccgcctt 4623079

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                            
Query: 364      cctttgtcacctccctggcaaggtcgctgcggtgcagctccaccttcatctgggccaccc 423
                |||| ||||||||| |||  |||||||  ||| ||||| |||||   |||| ||| | ||
Sbjct: 32554378 ccttggtcacctccttggtcaggtcgccacggcgcagcaccaccgaaatctcggcaatcc 32554437

                                          
Query: 424      tctgcttcttgatcttctcgtccagc 449
                |||||||||||||||||  |||||||
Sbjct: 32554438 tctgcttcttgatcttcatgtccagc 32554463

>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1353_F08
          Length = 101988

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                         
Query: 364   cctttgtcacctccctggcaaggtcgctgcggtgcagctccaccttcatctgggccaccc 423
             |||| ||||||||| |||  |||||||  ||| ||||| |||||   |||| ||| | ||
Sbjct: 51351 ccttggtcacctccttggtcaggtcgccacggcgcagcaccaccgaaatctcggcaatcc 51410

                                       
Query: 424   tctgcttcttgatcttctcgtccagc 449
             |||||||||||||||||  |||||||
Sbjct: 51411 tctgcttcttgatcttcatgtccagc 51436

>dbj|AK071059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081E11, full
           insert sequence
          Length = 991

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 364 cctttgtcacctccctggcaaggtcgctgcggtgcagctccaccttcatctgggccaccc 423
           |||| ||||||||| |||  |||||||  ||| ||||| |||||   |||| ||| | ||
Sbjct: 481 ccttggtcacctccttggtcaggtcgccacggcgcagcaccaccgaaatctcggcaatcc 422

                                     
Query: 424 tctgcttcttgatcttctcgtccagc 449
           |||||||||||||||||  |||||||
Sbjct: 421 tctgcttcttgatcttcatgtccagc 396

>dbj|AK066823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075K03, full
            insert sequence
          Length = 1188

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 364  cctttgtcacctccctggcaaggtcgctgcggtgcagctccaccttcatctgggccaccc 423
            |||| ||||||||| |||  |||||||  ||| ||||| |||||   |||| ||| | ||
Sbjct: 1010 ccttggtcacctccttggtcaggtcgccacggcgcagcaccaccgaaatctcggcaatcc 951

                                      
Query: 424  tctgcttcttgatcttctcgtccagc 449
            |||||||||||||||||  |||||||
Sbjct: 950  tctgcttcttgatcttcatgtccagc 925

>gb|M32453.1|XELALPA X.borealis alpha-I globin mRNA, complete cds
          Length = 586

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 131 gaccaagaacatcctgtacaaa 152
           ||||||||||||||||||||||
Sbjct: 149 gaccaagaacatcctgtacaaa 128

>gb|BT019051.1| Zea mays clone Contig572.F mRNA sequence
          Length = 910

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 427 gcttcttgatcttctcgtcca 447
           |||||||||||||||||||||
Sbjct: 198 gcttcttgatcttctcgtcca 178

>gb|BC075196.1| Xenopus laevis cDNA clone MGC:83408 IMAGE:7008488, complete cds
          Length = 633

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 132 accaagaacatcctgtacaaa 152
           |||||||||||||||||||||
Sbjct: 138 accaagaacatcctgtacaaa 118

>ref|XM_845025.1| PREDICTED: Canis familiaris similar to chromatin modifying protein
           5 (LOC608114), partial mRNA
          Length = 366

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 427 gcttcttgatcttctcgtcca 447
           |||||||||||||||||||||
Sbjct: 187 gcttcttgatcttctcgtcca 167

>gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F3 genomic sequence, complete
            sequence
          Length = 104001

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 421  ccctctgcttcttgatcttct 441
            |||||||||||||||||||||
Sbjct: 6627 ccctctgcttcttgatcttct 6607

>dbj|AK109978.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-D04, full
            insert sequence
          Length = 3707

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 379  tggcaaggtcgctgcggtgca 399
            |||||||||||||||||||||
Sbjct: 1269 tggcaaggtcgctgcggtgca 1289

>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I,
             complete sequence
          Length = 86436

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 421   ccctctgcttcttgatcttct 441
             |||||||||||||||||||||
Sbjct: 65421 ccctctgcttcttgatcttct 65401

>emb|AL928820.8| Zebrafish DNA sequence from clone CH211-105D11 in linkage group 19,
             complete sequence
          Length = 155348

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 601   cagcagtaggggcggtagcagcgcg 625
             ||||||||| |||||||||||||||
Sbjct: 12382 cagcagtagcggcggtagcagcgcg 12358

>gb|AC161799.5| Mus musculus chromosome 15, clone RP23-304B13, complete sequence
          Length = 188284

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   cagctccaccttcatctggg 417
             ||||||||||||||||||||
Sbjct: 79729 cagctccaccttcatctggg 79748

>ref|XM_582919.2| PREDICTED: Bos taurus similar to Transcription factor COE4 (Early
            B-cell factor 4) (EBF-4) (Olf-1/EBF-like 4) (OE-4)
            (O/E-4) (LOC506470), mRNA
          Length = 2802

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 496  tgcccgggccccccagcttcctca 519
            |||||||| |||||||||||||||
Sbjct: 1706 tgcccgggtcccccagcttcctca 1729

>gb|AC121307.7| Mus musculus chromosome 15, clone RP24-209E20, complete sequence
          Length = 165154

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  cagctccaccttcatctggg 417
            ||||||||||||||||||||
Sbjct: 2602 cagctccaccttcatctggg 2583

>gb|AC124728.5| Mus musculus BAC clone RP23-470C22 from chromosome 6, complete sequence
          Length = 183845

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    tgcagctccaccttcatctg 415
              ||||||||||||||||||||
Sbjct: 162221 tgcagctccaccttcatctg 162240

>ref|XM_949049.1| Theileria annulata strain Ankara hypothetical protein (TA03005)
            partial mRNA
          Length = 1668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  caagaacatcctgtacaaac 153
            ||||||||||||||||||||
Sbjct: 1089 caagaacatcctgtacaaac 1108

>gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete sequence
          Length = 113431

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 553   tctcctcaaatcccttcggc 572
             ||||||||||||||||||||
Sbjct: 11836 tctcctcaaatcccttcggc 11855

>emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2-16p13, COMPLETE SEQUENCE
          Length = 116834

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 553   tctcctcaaatcccttcggc 572
             ||||||||||||||||||||
Sbjct: 55196 tctcctcaaatcccttcggc 55215

>gb|AY649204.1| Hakaria simonyi tRNA-Leu, NADH dehydgrogenase subunit 1, tRNA-Ile,
           and tRNA-Gln genes, complete sequence; and tRNA-Met,
           partial sequence; mitochondrial
          Length = 1203

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 242 aaaaacattcttaccaccaacact 265
           ||||||||||||||||| ||||||
Sbjct: 957 aaaaacattcttaccactaacact 980

>gb|AE012285.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 193 of
             460 of the complete genome
          Length = 12749

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gtcgatcaggtccatcaccg 363
             ||||||||||||||||||||
Sbjct: 10711 gtcgatcaggtccatcaccg 10692

>ref|XM_694855.1| PREDICTED: Danio rerio similar to TPR repeat containing protein
            KIAA1043 (LOC571280), mRNA
          Length = 1827

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  tcaaaagaccaagaacatcc 144
            ||||||||||||||||||||
Sbjct: 1597 tcaaaagaccaagaacatcc 1578

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     gtcgatcaggtccatcaccg 363
               ||||||||||||||||||||
Sbjct: 2845740 gtcgatcaggtccatcaccg 2845759

>ref|XM_316174.2| Anopheles gambiae str. PEST ENSANGP00000005913
           (ENSANGG00000004501), partial mRNA
          Length = 2649

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 430 tcttgatcttctcgtccagc 449
           ||||||||||||||||||||
Sbjct: 979 tcttgatcttctcgtccagc 960

>ref|XM_556808.1| Anopheles gambiae str. PEST ENSANGP00000026467 (ENSANGG00000004501),
            partial mRNA
          Length = 3579

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  tcttgatcttctcgtccagc 449
            ||||||||||||||||||||
Sbjct: 1498 tcttgatcttctcgtccagc 1479

>emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chromosome 7, complete
             sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   gcgtgccttgtcgtcgtcca 471
             ||||||||||||||||||||
Sbjct: 91305 gcgtgccttgtcgtcgtcca 91324

>dbj|AP001152.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-856F16, complete
             sequence
          Length = 91200

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   ctgcttcttgatcttctcgt 444
             ||||||||||||||||||||
Sbjct: 76384 ctgcttcttgatcttctcgt 76403


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,079,523
Number of Sequences: 3902068
Number of extensions: 4079523
Number of successful extensions: 76887
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76762
Number of HSP's gapped (non-prelim): 125
length of query: 626
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 603
effective length of database: 17,143,297,704
effective search space: 10337408515512
effective search space used: 10337408515512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)