ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61o14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 268 7e-72
2RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 209 5e-54
3RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 207 2e-53
4RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 201 8e-52
5RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 166 3e-41
6RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 164 2e-40
7RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 158 1e-38
8RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 155 5e-38
9RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 151 1e-36
10RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 150 2e-36
11RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 150 2e-36
12RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 150 3e-36
13RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 144 2e-34
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 143 3e-34
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 108 9e-24
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 87 2e-17
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 69 1e-11
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 62 1e-09
19ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2... 31 2.5
20RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 31 2.5
21GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre... 30 4.2
22CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like m... 30 5.5
23S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B ... 30 5.5
24LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 p... 30 5.5
25DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleot... 29 7.2
26DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 29 7.2
27DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 29 7.2
28DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo... 29 7.2
29TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2) 29 7.2
30TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2) 29 7.2
31TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2) 29 7.2
32TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2) 29 7.2
33PBPB_BACSU (Q07868) Penicillin-binding protein 2B (PBP-2B) 29 9.3
34PTPRZ_HUMAN (P23471) Receptor-type tyrosine-protein phosphatase ... 29 9.3

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  268 bits (685), Expect = 7e-72
 Identities = 130/133 (97%), Positives = 131/133 (98%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV
Sbjct: 332 IDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 391

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 165
           QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP
Sbjct: 392 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 451

Query: 164 TARSDDGSCLYTF 126
           TARSDDGSCLYTF
Sbjct: 452 TARSDDGSCLYTF 464



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  209 bits (531), Expect = 5e-54
 Identities = 100/133 (75%), Positives = 116/133 (87%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLV 401

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 165
            EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYGKGAQQ  LPVPEGCTD  A+N+DP
Sbjct: 402 MEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDP 461

Query: 164 TARSDDGSCLYTF 126
           TARSDDG+C+Y F
Sbjct: 462 TARSDDGTCVYNF 474



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  207 bits (526), Expect = 2e-53
 Identities = 96/131 (73%), Positives = 114/131 (87%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLV
Sbjct: 340 IDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLV 399

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDP 165
           QEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+GK AQQ +LPV +GCTD  AKNYDP
Sbjct: 400 QEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDP 459

Query: 164 TARSDDGSCLY 132
           TARSDDGSC Y
Sbjct: 460 TARSDDGSCTY 470



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  201 bits (512), Expect = 8e-52
 Identities = 97/135 (71%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLV
Sbjct: 342 IDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLV 401

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNY 171
           QEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG  A Q  G +PVPEGCTD  A NY
Sbjct: 402 QEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNY 461

Query: 170 DPTARSDDGSCLYTF 126
           DPTARSDDGSC+Y F
Sbjct: 462 DPTARSDDGSCVYKF 476



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  166 bits (421), Expect = 3e-41
 Identities = 78/97 (80%), Positives = 88/97 (90%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLV
Sbjct: 329 IDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLV 388

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 234
           QEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYGK
Sbjct: 389 QEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  164 bits (414), Expect = 2e-40
 Identities = 77/96 (80%), Positives = 88/96 (91%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV
Sbjct: 332 IDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLV 391

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 237
           +EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 392 KEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  158 bits (399), Expect = 1e-38
 Identities = 73/96 (76%), Positives = 87/96 (90%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLV 401

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 237
           QEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 402 QEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  155 bits (393), Expect = 5e-38
 Identities = 71/95 (74%), Positives = 87/95 (91%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV
Sbjct: 338 IDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLV 397

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240
            EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 398 AEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  151 bits (382), Expect = 1e-36
 Identities = 70/94 (74%), Positives = 85/94 (90%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV
Sbjct: 342 IDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLV 401

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 243
           +EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 402 EEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  150 bits (379), Expect = 2e-36
 Identities = 73/94 (77%), Positives = 83/94 (88%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLV
Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLV 405

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 243
           QEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 406 QEQENVKRVQLAETYLKEAALGDANADAINTGNF 439



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  150 bits (379), Expect = 2e-36
 Identities = 72/95 (75%), Positives = 82/95 (86%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLV
Sbjct: 346 IDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLV 405

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240
           QEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 406 QEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  150 bits (378), Expect = 3e-36
 Identities = 72/92 (78%), Positives = 83/92 (90%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLV
Sbjct: 341 IDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLV 400

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTG 249
           QEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 401 QEQENVKRVQLAETYLKEAALGDANADAINTG 432



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  144 bits (362), Expect = 2e-34
 Identities = 64/95 (67%), Positives = 86/95 (90%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLV
Sbjct: 344 IDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLV 403

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240
           QEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 404 QEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  143 bits (360), Expect = 3e-34
 Identities = 64/95 (67%), Positives = 85/95 (89%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLV
Sbjct: 346 IDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLV 405

Query: 344 QEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 240
           QEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 406 QEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  108 bits (270), Expect = 9e-24
 Identities = 50/71 (70%), Positives = 60/71 (84%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV
Sbjct: 339 IDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLV 398

Query: 344 QEQDNVKRVQL 312
            EQ+NVKRV+L
Sbjct: 399 MEQENVKRVKL 409



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F GALRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV
Sbjct: 315 IDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLV 373

Query: 344 QEQDNVKRVQLADTYMSQAAL 282
            EQ+NVKRVQLAD Y+S A L
Sbjct: 374 DEQENVKRVQLADAYLSGAEL 394



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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 29/75 (38%), Positives = 48/75 (64%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F  ALR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V
Sbjct: 215 IDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMV 274

Query: 344 QEQDNVKRVQLADTY 300
            EQ  ++  QL D Y
Sbjct: 275 AEQKRIETSQLVDEY 289



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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 28/75 (37%), Positives = 46/75 (61%)
 Frame = -1

Query: 524 LTFSGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLV 345
           + F  ALR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G++++
Sbjct: 215 IDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVL 274

Query: 344 QEQDNVKRVQLADTY 300
            EQ  V   QL D Y
Sbjct: 275 GEQQRVDNSQLVDEY 289



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>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 23) (DHHC-23)
          Length = 409

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +1

Query: 199 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 375
           P G+ K+P  +P   KE       L  P  AW   +   C  R+   C W + C   S+ 
Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301

Query: 376 STVI 387
              I
Sbjct: 302 QAFI 305



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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 419 RDGPVTFEQPKMTVEK 372
           R+GP TFEQP MT+EK
Sbjct: 17  REGPPTFEQPAMTIEK 32



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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 304 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 408
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453



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>CCMF_ARATH (P93286) Putative cytochrome c biogenesis ccmF-like mitochondrial|
           protein
          Length = 442

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = -3

Query: 252 WFLLR*RSTARYFARAGRLHRPKCQELRPNGKERRR 145
           +FL R RS  R  AR     R K Q LRPNG E+RR
Sbjct: 139 FFLARDRSAKRERAR-----RRKGQTLRPNGNEQRR 169



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>S20AB_XENLA (Q6PB26) Sodium-dependent phosphate transporter 1-B (Solute carrier|
           family 20 member 1-B)
          Length = 685

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +3

Query: 129 GVKAAAVVAPCRWVVVLGILVG--ATFRHGQSTLLCSFTVEGTSLHRILVSITQSCLAHV 302
           G++   ++AP  W++VLG ++     F  G + +  SF   GT++   +V++ Q+C+   
Sbjct: 15  GIQDVHIMAPYLWMLVLGFVIAFVLAFSVGANDVANSF---GTAVGSGVVTLRQACIL-- 69

Query: 303 GVSKLHTLDIVLL 341
             S   T+  VLL
Sbjct: 70  -ASIFETVGSVLL 81



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>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -1

Query: 470 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 363
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257



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>DNLI_VARV (P33798) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442



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>DNLI_VACCV (P16272) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442



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>DNLI_VACCC (P20492) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442



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>DNLI_VACCA (O57250) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 552

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 347 VQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPV-PEGCTDQNA 180
           V E    + +++   Y+++ ++ D+  D +  G++YGKGA+ G + V   GC D  +
Sbjct: 387 VYEPGKRRWLKIKRDYLNEGSMADS-ADLVVLGAYYGKGAKGGIMAVFLMGCYDDES 442



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>TAL_STRP8 (P66961) Probable transaldolase (EC 2.2.1.2)|
          Length = 214

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = -1

Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270
           E + K + +  DGP++ E   +T + ++E    + +  DNV  V++  T     A    +
Sbjct: 40  ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98

Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192
           ++ +KT         QG + +  G T
Sbjct: 99  KEGIKTNVTLIFTVSQGLMAMKAGAT 124



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>TAL_STRP6 (Q5XAK4) Probable transaldolase (EC 2.2.1.2)|
          Length = 214

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = -1

Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270
           E + K + +  DGP++ E   +T + ++E    + +  DNV  V++  T     A    +
Sbjct: 40  ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98

Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192
           ++ +KT         QG + +  G T
Sbjct: 99  KEGIKTNVTLIFTVSQGLMAMKAGAT 124



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>TAL_STRP3 (P66960) Probable transaldolase (EC 2.2.1.2)|
          Length = 214

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = -1

Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270
           E + K + +  DGP++ E   +T + ++E    + +  DNV  V++  T     A    +
Sbjct: 40  ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98

Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192
           ++ +KT         QG + +  G T
Sbjct: 99  KEGIKTNVTLIFTVSQGLMAMKAGAT 124



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>TAL_STRP1 (P66959) Probable transaldolase (EC 2.2.1.2)|
          Length = 214

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = -1

Query: 449 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDAN 270
           E + K + +  DGP++ E   +T + ++E    + +  DNV  V++  T     A    +
Sbjct: 40  ETVIKEICDIVDGPISAEVTGLTADAMVEEARSIAKWHDNVV-VKIPMTTEGLKATNILS 98

Query: 269 QDAMKTGSFYGKGAQQGTLPVPEGCT 192
           ++ +KT         QG + +  G T
Sbjct: 99  KEGIKTNVTLIFTVSQGLMAMKAGAT 124



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>PBPB_BACSU (Q07868) Penicillin-binding protein 2B (PBP-2B)|
          Length = 716

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 488 DDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPK 387
           D+E  +  G+ G+E +  + +  RDG VT+E  K
Sbjct: 186 DEETNEISGAMGLEKVLDKYLKERDGYVTYESDK 219



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>PTPRZ_HUMAN (P23471) Receptor-type tyrosine-protein phosphatase zeta precursor|
           (EC 3.1.3.48) (R-PTP-zeta)
          Length = 2314

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
 Frame = -1

Query: 485 DEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQE---QDNVKRVQ 315
           +E+ + V S+  EN+     N     VT+E+P++  + ++E   +L Q+   +D  K   
Sbjct: 304 EEIHEAVCSSEPENVQADPENYTSLLVTWERPRVVYDTMIEKFAVLYQQLDGEDQTKHEF 363

Query: 314 LADTYMSQAALGD---ANQD------AMKTGSFYGKGAQQGTLPVP 204
           L D Y    A+ +    N        A+ T   YGK + Q  + +P
Sbjct: 364 LTDGYQDLGAILNNLLPNMSYVLQIVAICTNGLYGKYSDQLIVDMP 409


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,122,188
Number of Sequences: 219361
Number of extensions: 1435662
Number of successful extensions: 4112
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4110
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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