ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y5G0_ENCCU (Q8STJ2) Hypothetical protein ECU05_1600/ECU11_0130 30 8.4

>Y5G0_ENCCU (Q8STJ2) Hypothetical protein ECU05_1600/ECU11_0130|
          Length = 298

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -1

Query: 185 VFLMCACNAFIFSSSLGSLAQFVL 114
           +F +  CN+F+FS S+G++A  ++
Sbjct: 123 MFTLLVCNSFVFSGSIGNIADVII 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,721,014
Number of Sequences: 219361
Number of extensions: 1628414
Number of successful extensions: 4170
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4165
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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