ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62d05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY887089.1| Hordeum vulgare subsp. vulgare clone BAC 423G22 phytochelatin synthetase-like protein (PCS-a) pseudogene, complete sequence Length = 5106 Score = 67.9 bits (34), Expect = 2e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 15 atctaagacaagaattttnggacggagggagtatctg 51 |||||||||||||||||| |||||||||||||||||| Sbjct: 1900 atctaagacaagaattttgggacggagggagtatctg 1936
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 65.9 bits (33), Expect = 8e-08 Identities = 45/48 (93%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 ||||| |||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 30502 catatatagaca-aatctaagacaagaattttgggacggagggagtat 30456
>emb|AJ704455.1| Hordeum vulgare partial eIF(iso)4E gene for putative eukaryotic translation initiation factor (iso)4E, exons 3-5, line OWB-D Length = 1412 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagta 47 |||||||||||| ||| ||||||||||||||| |||||||||||||| Sbjct: 515 catatctagaca-aatgtaagacaagaattttgggacggagggagta 470 Score = 54.0 bits (27), Expect = 3e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 18 taagacaagaattttnggacggagggagta 47 ||||||||||||||| |||||||||||||| Sbjct: 568 taagacaagaattttgggacggagggagta 597
>gb|AY821733.1| Triticum monococcum beta amylase gene, partial cds Length = 1489 Score = 61.9 bits (31), Expect = 1e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 14 aatctaagacaagaattttnggacggagggagta 47 ||||||||||||||||||| |||||||||||||| Sbjct: 584 aatctaagacaagaattttgggacggagggagta 617 Score = 48.1 bits (24), Expect = 0.018 Identities = 32/35 (91%) Strand = Plus / Minus Query: 14 aatctaagacaagaattttnggacggagggagtat 48 ||||||||||||||||||| | ||||||| ||||| Sbjct: 524 aatctaagacaagaattttggaacggaggaagtat 490
>gb|AY821732.1| Triticum baeoticum beta amylase gene, partial cds Length = 1536 Score = 61.9 bits (31), Expect = 1e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 14 aatctaagacaagaattttnggacggagggagta 47 ||||||||||||||||||| |||||||||||||| Sbjct: 633 aatctaagacaagaattttgggacggagggagta 666 Score = 48.1 bits (24), Expect = 0.018 Identities = 32/35 (91%) Strand = Plus / Minus Query: 14 aatctaagacaagaattttnggacggagggagtat 48 ||||||||||||||||||| | ||||||| ||||| Sbjct: 573 aatctaagacaagaattttggaacggaggaagtat 539
>dbj|AK067202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D17, full insert sequence Length = 2800 Score = 61.9 bits (31), Expect = 1e-06 Identities = 74/89 (83%) Strand = Plus / Minus Query: 227 atgttctccttcacgaccgtgaccgggcaggccgagtggttaacaacgtaagtgctnacg 286 ||||||||||| |||||||| || ||||||| || || || || | ||| | ||| ||| Sbjct: 2469 atgttctccttgacgaccgtaactgggcaggtcgcgttattcacgatgtaggagctgacg 2410 Query: 287 ctncccatcagagccctcttgagcgtgct 315 || |||||||||||||||||||| ||||| Sbjct: 2409 cttcccatcagagccctcttgagtgtgct 2381
>gb|AF277239.1|AF277239 Heteranthelium piliferum isolate H5557 disrupted meiotic cDNA 1 protein (DMC1) gene, partial cds Length = 1293 Score = 60.0 bits (30), Expect = 5e-06 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 |||||||| ||| |||||||||| |||||||| ||||||||||||||| Sbjct: 1141 catatctaaaca-aatctaagacnagaattttgggacggagggagtat 1187 Score = 56.0 bits (28), Expect = 8e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 14 aatctaagacaagaattttnggacggagggagtat 48 |||||| |||||||||||| ||||||||||||||| Sbjct: 1093 aatctatgacaagaattttgggacggagggagtat 1059
>dbj|AB182944.1| Triticum aestivum Wknox1b gene for KN1 homeobox protein, complete cds Length = 10847 Score = 60.0 bits (30), Expect = 5e-06 Identities = 42/45 (93%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 3 tatctagacagaatctaagacaagaattttnggacggagggagta 47 |||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 7298 tatctagaca-aatctaagacaagaattttgggaccgagggagta 7255 Score = 58.0 bits (29), Expect = 2e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 16 tctaagacaagaattttnggacggagggagta 47 ||||||||||||||||| |||||||||||||| Sbjct: 7350 tctaagacaagaattttgggacggagggagta 7381
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/47 (91%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagta 47 |||||||| ||| |||||||||||| |||||| |||||||||||||| Sbjct: 222835 catatctaaaca-aatctaagacaataattttgggacggagggagta 222790 Score = 48.1 bits (24), Expect = 0.018 Identities = 29/31 (93%) Strand = Plus / Plus Query: 18 taagacaagaattttnggacggagggagtat 48 ||||||||||||||| ||||| ||||||||| Sbjct: 222888 taagacaagaattttgggacgaagggagtat 222918
>gb|AY235466.1| Triticum aestivum FCA-like protein (Fca-1F10) gene, exons 8 through 15, partial cds Length = 3502 Score = 52.0 bits (26), Expect = 0.001 Identities = 34/37 (91%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtatctgt 52 |||| |||||| ||||| ||||||||||||||||||| Sbjct: 691 tctacgacaagtattttgggacggagggagtatctgt 655
>emb|X73528.1|TAPHOK T.aestivum gene for phosphoglycerate kinase Length = 3557 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 3 tatctagacagaatctaagacaagaattttnggacggagggagta 47 |||||||||| ||||||||||||||||||| || |||||||||| Sbjct: 228 tatctagaca-aatctaagacaagaattttaagatggagggagta 185 Score = 50.1 bits (25), Expect = 0.005 Identities = 36/40 (90%) Strand = Plus / Plus Query: 14 aatctaagacaagaattttnggacggagggagtatctgtt 53 ||||||||||||||||||| | ||| ||||||||| |||| Sbjct: 244 aatctaagacaagaattttggaacgaagggagtatttgtt 283
>gb|DQ175991.1| Hordeum vulgare subsp. vulgare clone 65-21A-RB flanking T-DNA insertion sequence Length = 325 Score = 50.1 bits (25), Expect = 0.005 Identities = 33/36 (91%) Strand = Plus / Minus Query: 14 aatctaagacaagaattttnggacggagggagtatc 49 ||||||||||||||||||| | | |||||||||||| Sbjct: 270 aatctaagacaagaattttagaatggagggagtatc 235
>gb|DQ316901.1| Hordeum vulgare subsp. vulgare cultivar Priekulu 1 beta-amylase (Bmy1) gene, intron III Length = 1087 Score = 50.1 bits (25), Expect = 0.005 Identities = 30/32 (93%) Strand = Plus / Minus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| ||||| ||||||||| Sbjct: 82 ctaagacaagaattttaggacgaagggagtat 51 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 |||||||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 134 catatctaaaca-aatctaagacaagaattttgaaacggaggtagtat 180
>gb|DQ316900.1| Hordeum vulgare subsp. vulgare cultivar Malva beta-amylase (Bmy1) gene, intron III Length = 1083 Score = 50.1 bits (25), Expect = 0.005 Identities = 30/32 (93%) Strand = Plus / Minus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| ||||| ||||||||| Sbjct: 82 ctaagacaagaattttaggacgaagggagtat 51 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 |||||||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 134 catatctaaaca-aatctaagacaagaattttgaaacggaggtagtat 180
>gb|DQ316899.1| Hordeum vulgare subsp. vulgare cultivar Rasa beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 50.1 bits (25), Expect = 0.005 Identities = 30/32 (93%) Strand = Plus / Minus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| ||||| ||||||||| Sbjct: 82 ctaagacaagaattttaggacgaagggagtat 51 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 |||||||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 134 catatctaaaca-aatctaagacaagaattttgaaacggaggtagtat 180
>gb|DQ316898.1| Hordeum vulgare subsp. vulgare cultivar Kombainieris beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 50.1 bits (25), Expect = 0.005 Identities = 30/32 (93%) Strand = Plus / Minus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| ||||| ||||||||| Sbjct: 82 ctaagacaagaattttaggacgaagggagtat 51 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 |||||||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 134 catatctaaaca-aatctaagacaagaattttgaaacggaggtagtat 180
>gb|DQ316897.1| Hordeum vulgare subsp. vulgare cultivar Ansis beta-amylase (Bmy1) gene, intron III Length = 1081 Score = 50.1 bits (25), Expect = 0.005 Identities = 30/32 (93%) Strand = Plus / Minus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| ||||| ||||||||| Sbjct: 82 ctaagacaagaattttaggacgaagggagtat 51 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 |||||||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 134 catatctaaaca-aatctaagacaagaattttgaaacggaggtagtat 180
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 50.1 bits (25), Expect = 0.005 Identities = 30/32 (93%) Strand = Plus / Minus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| | ||||||||||||| Sbjct: 46622 ctaagacaagaattttggaacggagggagtat 46591 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagta 47 ||||| |||||| ||| ||||||||||||||| ||||||| |||||| Sbjct: 46674 catatatagaca-aatttaagacaagaattttgggacggaaggagta 46719
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 50.1 bits (25), Expect = 0.005 Identities = 30/32 (93%) Strand = Plus / Plus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| | ||||||||||||| Sbjct: 7209 ctaagacaagaattttggaacggagggagtat 7240
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagta 47 ||||| |||||| ||| |||||||| |||||| |||||||||||||| Sbjct: 84340 catatttagaca-aatttaagacaacaattttgggacggagggagta 84295 Score = 40.1 bits (20), Expect = 4.5 Identities = 41/47 (87%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 3 tatctagacagaatctaagacaagaattttnggacggagggagtatc 49 |||||||||| ||||||||||||| | || | |||||||||||||| Sbjct: 179914 tatctagaca-aatctaagacaagtaattcggaacggagggagtatc 179959 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 18 taagacaagaattttnggacggaggga 44 ||||||||||||||| ||| ||||||| Sbjct: 84392 taagacaagaattttgggatggaggga 84418
>gb|DQ175899.1| Hordeum vulgare subsp. vulgare clone 28-36A-RB flanking T-DNA insertion sequence Length = 246 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagta 47 |||||||| ||| ||| ||||||||||||||| ||||||||||||| Sbjct: 79 catatctaaaca-aatgtaagacaagaattttgagacggagggagta 124
>gb|U60755.1|TAU60755 Triticum aestivum delta-24-sterol methyltransferase (TA-MT) gene, complete cds Length = 4749 Score = 48.1 bits (24), Expect = 0.018 Identities = 32/35 (91%) Strand = Plus / Plus Query: 14 aatctaagacaagaattttnggacggagggagtat 48 ||||||||||||| | ||| ||||||||||||||| Sbjct: 843 aatctaagacaagtaatttgggacggagggagtat 877
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.073 Identities = 63/77 (81%) Strand = Plus / Minus Query: 227 atgttctccttcacgaccgtgaccgggcaggccgagtggttaacaacgtaagtgctnacg 286 ||||||||||| |||||||| || ||||||| || || || || | ||| | ||| ||| Sbjct: 3649358 atgttctccttgacgaccgtaactgggcaggtcgcgttattcacgatgtaggagctgacg 3649299 Query: 287 ctncccatcagagccct 303 || |||||||||||||| Sbjct: 3649298 cttcccatcagagccct 3649282 Score = 44.1 bits (22), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgt 52 ||||| ||||||||||||||||||| Sbjct: 26335919 attttgggacggagggagtatctgt 26335895 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 30346914 gacaagtattttgggacggagggagtat 30346887 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 34193898 tttttggacggagggagtatctg 34193920 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 2495585 attttgggacggagggagtatct 2495607
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 46.1 bits (23), Expect = 0.073 Identities = 63/77 (81%) Strand = Plus / Minus Query: 227 atgttctccttcacgaccgtgaccgggcaggccgagtggttaacaacgtaagtgctnacg 286 ||||||||||| |||||||| || ||||||| || || || || | ||| | ||| ||| Sbjct: 57838 atgttctccttgacgaccgtaactgggcaggtcgcgttattcacgatgtaggagctgacg 57779 Query: 287 ctncccatcagagccct 303 || |||||||||||||| Sbjct: 57778 cttcccatcagagccct 57762
>gb|AY235469.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2C9) gene, exons 8 through 15, partial sequence Length = 3511 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 704 tctacgacaagtattttgggacggagggagtat 672
>gb|AY235468.1| Triticum aestivum FCA-like protein (Fca-2A3) gene, exons 8 through 15, partial cds Length = 3601 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 746 tctacgacaagtattttgggacggagggagtat 714
>gb|AY235467.1| Triticum aestivum FCA-like protein (Fca-1C5) gene, exons 8 through 15, partial cds Length = 3508 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 687 tctacgacaagtattttgggacggagggagtat 655
>gb|AY235464.1| Triticum aestivum FCA-like protein (Fca-5A3) gene, exons 8 through 15, partial cds Length = 3593 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 749 tctacgacaagtattttgggacggagggagtat 717
>gb|AY235462.1| Triticum aestivum FCA-like protein (Fca-4C5) gene, exons 8 through 15, partial cds Length = 3585 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 732 tctacgacaagtattttgggacggagggagtat 700
>gb|AY235461.1| Triticum aestivum FCA-like protein (Fca-1B8) gene, exons 8 through 15, partial cds Length = 3631 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 758 tctacgacaagtattttgggacggagggagtat 726
>gb|AY235448.1| Triticum aestivum FCA-like protein (Fca-2G10) gene, exons 8 through 15, partial cds Length = 3610 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 755 tctacgacaagtattttgggacggagggagtat 723
>gb|AY235447.1| Triticum aestivum FCA-like protein (Fca-5H8) gene, exons 8 through 15, partial cds Length = 3524 Score = 44.1 bits (22), Expect = 0.29 Identities = 30/33 (90%) Strand = Plus / Minus Query: 16 tctaagacaagaattttnggacggagggagtat 48 |||| |||||| ||||| ||||||||||||||| Sbjct: 734 tctacgacaagtattttgggacggagggagtat 702
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 44.1 bits (22), Expect = 0.29 Identities = 27/29 (93%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgttact 56 ||||| ||||||||||||||||| ||||| Sbjct: 89648 attttgggacggagggagtatctcttact 89620
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctgtt 53 |||| |||||||||||||||||||| Sbjct: 21841829 ttttgggacggagggagtatctgtt 21841805 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 11326479 attttgggacggagggagtatct 11326501
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 44.1 bits (22), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctgtt 53 |||| |||||||||||||||||||| Sbjct: 26430 ttttgggacggagggagtatctgtt 26406
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 44.1 bits (22), Expect = 0.29 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgt 52 ||||| ||||||||||||||||||| Sbjct: 9784 attttgggacggagggagtatctgt 9760
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ttttnggacggagggagtatctgt 52 |||| ||||||||||||||||||| Sbjct: 13798 tttttggacggagggagtatctgt 13821
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 101945 gacaagtatttttggacggagggagtat 101972
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 125764 gacaagtattttgggacggagggagtat 125737
>gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudogene, partial sequence; SBE I pseudogene, complete sequence; and starch branching enzyme I (SBE I) gene, complete cds Length = 25187 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 ||||||| |||| ||||||||||||||| Sbjct: 4265 gacaagatttttcggacggagggagtat 4238
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ttttnggacggagggagtatctgt 52 |||| ||||||||||||||||||| Sbjct: 50096 ttttgggacggagggagtatctgt 50119
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctgt 52 |||| ||||||||||||||||||| Sbjct: 21035182 ttttgggacggagggagtatctgt 21035159 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 32961770 ttttcggacggagggagtatctg 32961792 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 28231845 attttgggacggagggagtatct 28231867 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gacggagggagtatctgtta 54 |||||||||||||||||||| Sbjct: 10811042 gacggagggagtatctgtta 10811061 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 5722463 attttaggacggagggagtatatgtta 5722437 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggacggagggagtatctgtt 53 |||||||||||||||||||| Sbjct: 1122365 ggacggagggagtatctgtt 1122384
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 8898 gacaagtattttcggacggagggagtat 8925
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 11612 gacaagtattttcggacggagggagtat 11639
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 37407 gacaagtattttcggacggagggagtat 37380 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagta 47 |||||| ||||| |||||||||||||| Sbjct: 93488 gacaagtattttcggacggagggagta 93462
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete sequence Length = 131250 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctgt 52 |||| ||||||||||||||||||| Sbjct: 12938 ttttgggacggagggagtatctgt 12915
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 10031983 gacaagtattttgggacggagggagtat 10031956
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 ttttnggacggagggagtatctgt 52 |||| ||||||||||||||||||| Sbjct: 2735472 tttttggacggagggagtatctgt 2735495 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 21795499 atttttggacggagggagtatct 21795477
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctgt 52 |||| ||||||||||||||||||| Sbjct: 21028211 ttttgggacggagggagtatctgt 21028188 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 33052280 ttttcggacggagggagtatctg 33052302 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 28323169 attttgggacggagggagtatct 28323191 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gacggagggagtatctgtta 54 |||||||||||||||||||| Sbjct: 10809143 gacggagggagtatctgtta 10809162 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 5721676 attttaggacggagggagtatatgtta 5721650 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggacggagggagtatctgtt 53 |||||||||||||||||||| Sbjct: 1122363 ggacggagggagtatctgtt 1122382
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctg 51 ||||| |||||||||||||||||| Sbjct: 5880096 attttgggacggagggagtatctg 5880073 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 16739343 attttgggacggagggagtatct 16739365
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 135233 gacaagtattttgggacggagggagtat 135206
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 32641 gacaagtattttgggacggagggagtat 32614
>gb|AF061203.1|AF061203 Hordeum vulgare cultivar Adorra beta-amylase (beta-amy1) gene, complete cds Length = 5126 Score = 42.1 bits (21), Expect = 1.1 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1 catatctagacagaatctaagacaagaattttnggacggagggagtat 48 |||||||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 2683 catatctaaaca-aatctaagacaagaattttgaaacggaggtagtat 2729 Score = 42.1 bits (21), Expect = 1.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 17 ctaagacaagaattttnggacggagggagtat 48 |||||||||||||||| ||||| |||||||| Sbjct: 2631 ctaagacaagaattttaggacgaggggagtat 2600
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds; and mitochondrial Mn-superoxide dismutase (MnSOD) gene, complete cds, nuclear gene encoding mitochondrial protein Length = 11304 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 10750 gacaagtattttcggacggagggagtat 10723
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctg 51 ||||| |||||||||||||||||| Sbjct: 58317 attttgggacggagggagtatctg 58294
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctg 51 ||||| |||||||||||||||||| Sbjct: 109898 attttgggacggagggagtatctg 109875
>dbj|AK102017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080F19, full insert sequence Length = 1205 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 902 gacaagtattttgggacggagggagtat 875
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagtat 48 |||||| ||||| ||||||||||||||| Sbjct: 10103680 gacaagtattttgggacggagggagtat 10103653
>emb|CT027664.2| Medicago truncatula chromosome 5 clone mth2-160e5, COMPLETE SEQUENCE Length = 146823 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 ggacggagggagtatctgtta 54 ||||||||||||||||||||| Sbjct: 22734 ggacggagggagtatctgtta 22714
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 47908 atttttggacggagggagtatct 47886
>gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, complete cds Length = 1149 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagta 47 |||||| ||||| |||||||||||||| Sbjct: 229 gacaagtattttcggacggagggagta 203
>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08, from chromosome 3, complete sequence Length = 108833 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gacggagggagtatctgtta 54 |||||||||||||||||||| Sbjct: 43845 gacggagggagtatctgtta 43826
>gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, complete sequence Length = 220068 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 ttgtatgtatcatcatacat 206 |||||||||||||||||||| Sbjct: 67961 ttgtatgtatcatcatacat 67980
>emb|X16509.1|OSALAM Rice alpha-amylase gene Length = 4276 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 1004 attttaggacggagggagtatct 1026
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 28405 ttttcggacggagggagtatctg 28383
>emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0067G11, complete sequence Length = 156983 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 87669 attttgggacggagggagtatct 87691
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 149405 attttgggacggagggagtatttgtta 149431
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ggacggagggagtatctgtt 53 |||||||||||||||||||| Sbjct: 26069 ggacggagggagtatctgtt 26088
>gb|AC016584.5| Homo sapiens chromosome 19 clone CTD-2596O15, complete sequence Length = 132457 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ttatcttcttgtatgtatca 198 |||||||||||||||||||| Sbjct: 36856 ttatcttcttgtatgtatca 36875
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 108708 attttaggacggagggagtatatgtta 108734
>gb|AC078893.10| Oryza sativa chromosome 10 BAC OSJNBb0044B19 genomic sequence, complete sequence Length = 81784 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 24726 attttgggacggagggagtatttgtta 24752
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 82986 attttgggacggagggagtatct 83008
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 19293558 attttaggacggagggagtatct 19293536 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 2626545 attttaggacggagggagtatct 2626567
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 17222874 attttgggacggagggagtatttgtta 17222848
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 18338258 attttgggacggagggagtatttgtta 18338284 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 16905102 attttgggacggagggagtatct 16905124 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 16660314 ttttaggacggagggagtatctg 16660292 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 13840726 attttgggacggagggagtatct 13840748
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 26031834 attttaggacggagggagtatct 26031812 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 24938526 attttgggacggagggagtatct 24938548 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctgttac 55 |||| ||||||||||||||| |||||| Sbjct: 16511792 ttttaggacggagggagtatttgttac 16511766 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggacggagggagtatctgtt 53 |||||||||||||||||||| Sbjct: 6741645 ggacggagggagtatctgtt 6741626
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 28887252 attttaggacggagggagtatct 28887274 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 24245813 attttaggacggagggagtatct 24245791 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 aattttnggacggagggagtatc 49 |||||| |||||||||||||||| Sbjct: 6671915 aattttgggacggagggagtatc 6671893 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 5619092 attttaggacggagggagtatatgtta 5619066 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagta 47 |||||| ||||| |||||||||||||| Sbjct: 3328534 gacaagtattttgggacggagggagta 3328508
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 25859376 attttgggacggagggagtatct 25859354 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 21011238 attttgggacggagggagtatct 21011216 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 8929833 attttgggacggagggagtatct 8929855 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 2089225 attttgggacggagggagtatct 2089247
>dbj|AP003073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702B09 Length = 172541 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 29584 tttttggacggagggagtatctg 29606
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 50006 attttgggacggagggagtatct 50028
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 4789 attttaggacggagggagtatct 4811
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 144938 attttaggacggagggagtatct 144960
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 52994 attttgggacggagggagtatttgtta 53020
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 132 attttgggacggagggagtatttgtta 158
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 110087 attttgggacggagggagtatct 110109
>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090E14 Length = 161119 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 138162 attttgggacggagggagtatct 138140
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 8239 attttgggacggagggagtatct 8217
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 95462 attttgggacggagggagtatct 95484
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 34915 attttgggacggagggagtatct 34937
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 9008 ttttaggacggagggagtatctg 8986
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctg 51 |||| |||||||||||||||||| Sbjct: 68453 ttttaggacggagggagtatctg 68431
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 102793 attttgggacggagggagtatct 102815
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 14474 attttgggacggagggagtatct 14452
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 141580 attttgggacggagggagtatct 141558
>dbj|AP005719.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1130E10 Length = 151606 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 aattttnggacggagggagtatc 49 |||||| |||||||||||||||| Sbjct: 64914 aattttgggacggagggagtatc 64892
>dbj|AP004275.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E05 Length = 137364 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 57364 attttaggacggagggagtatct 57342
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 90210 attttgggacggagggagtatct 90232
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 116398 attttgggacggagggagtatct 116420
>dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0089L03 Length = 172106 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ggacggagggagtatctgtt 53 |||||||||||||||||||| Sbjct: 94047 ggacggagggagtatctgtt 94028
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1186_G01 Length = 112077 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 67395 attttaggacggagggagtatct 67373
>dbj|AP003883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_H03 Length = 135914 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 40241 attttgggacggagggagtatct 40263
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 116711 attttaggacggagggagtatct 116689
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 29 ttttnggacggagggagtatctgttac 55 |||| ||||||||||||||| |||||| Sbjct: 122448 ttttaggacggagggagtatttgttac 122422
>dbj|AK066729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077G21, full insert sequence Length = 1011 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 951 attttgggacggagggagtatttgtta 977
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 80784 attttaggacggagggagtatatgtta 80758
>dbj|AP005160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0031C24 Length = 194111 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 27 aattttnggacggagggagtatc 49 |||||| |||||||||||||||| Sbjct: 184009 aattttgggacggagggagtatc 183987
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 21 gacaagaattttnggacggagggagta 47 |||||| ||||| |||||||||||||| Sbjct: 138227 gacaagtattttgggacggagggagta 138201
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatctgtta 54 ||||| ||||||||||||||| ||||| Sbjct: 17231914 attttgggacggagggagtatttgtta 17231888
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 19219785 attttaggacggagggagtatct 19219763 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 2626489 attttaggacggagggagtatct 2626511
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 41464 attttaggacggagggagtatct 41442
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136155 Score = 40.1 bits (20), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 28 attttnggacggagggagtatct 50 ||||| ||||||||||||||||| Sbjct: 126888 attttaggacggagggagtatct 126866 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,444,413 Number of Sequences: 3902068 Number of extensions: 1444413 Number of successful extensions: 47033 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 41995 Number of HSP's gapped (non-prelim): 5036 length of query: 340 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 318 effective length of database: 17,147,199,772 effective search space: 5452809527496 effective search space used: 5452809527496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
