ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah62d04 |
|---|---|
| Clone Library Name | barley_pub |
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 46.2 bits (108), Expect = 6e-05 Identities = 21/68 (30%), Positives = 39/68 (57%) Frame = -3 Query: 508 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 329 GQ+ + + ++R++ I+D GIK + ++ E+A + C+E +NRP MKEV Sbjct: 302 GQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEV 361 Query: 328 AEKLDRLR 305 E L+ ++ Sbjct: 362 VEVLEHIQ 369
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMM--FMSAMKENRLEVILDDGIKDEDNMEILEEIAELAK 377 EL+T ++ F+L + D + ++ +KE +LE ++D ++ E +E++ ++A Sbjct: 484 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVAL 543 Query: 376 HCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEM 260 C + S RP M EV L+ + W + EEM Sbjct: 544 LCTQSSPMERPKMSEVVRMLE--GDGLAERWEEWQKEEM 580
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 40.4 bits (93), Expect = 0.003 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%) Frame = -3 Query: 520 LDAIGQDKSLSMMF---------MSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCL 368 L+ + K++ M F + +K + ILD + ++E L++IA +A C+ Sbjct: 702 LEILSGRKAIDMQFEEGNIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCV 761 Query: 367 EMSGENRPSMKEVAEKLDR-LRKVMHHPWVQRNPEEMESLLG 245 M G++RPSM +V L+ L +M P +++ E +LG Sbjct: 762 RMRGKDRPSMDKVTTALEHALALLMGSPCIEQPILPTEVVLG 803
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 38.9 bits (89), Expect = 0.010 Identities = 21/79 (26%), Positives = 42/79 (53%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHC 371 E+++ ++P N+ + SL ++ ++++ I+D GIK + E L + E+A C Sbjct: 790 EIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQC 849 Query: 370 LEMSGENRPSMKEVAEKLD 314 LE RP M ++ +L+ Sbjct: 850 LEPYSTYRPCMVDIVRELE 868
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not| make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 38.5 bits (88), Expect = 0.013 Identities = 21/79 (26%), Positives = 42/79 (53%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHC 371 E+++ ++P N+ + SL ++ ++++ I+D GIK + E L + E+A C Sbjct: 791 EIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQC 850 Query: 370 LEMSGENRPSMKEVAEKLD 314 LE RP M ++ +L+ Sbjct: 851 LEPYSTYRPCMVDIVRELE 869
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 35.8 bits (81), Expect = 0.083 Identities = 21/81 (25%), Positives = 40/81 (49%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHC 371 ELLT ++P ++ + L + E R I D I D+D+ E + + E+A C Sbjct: 937 ELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLVLEIACRC 996 Query: 370 LEMSGENRPSMKEVAEKLDRL 308 L + + RP+ +++ L+ + Sbjct: 997 LGENPKTRPTTQQLVSWLENI 1017
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 34.7 bits (78), Expect = 0.18 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDE----DNMEILEEIAEL 383 EL+T KK + G+ + + + ++ I+D + DE ME + E L Sbjct: 1011 ELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSL 1070 Query: 382 AKHCLEMSGENRPSMKEVAEKLDR 311 A C E + RP+M++V ++L R Sbjct: 1071 ALRCAEKEVDKRPTMRDVVKQLTR 1094
>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase| CHD1) Length = 1468 Score = 34.7 bits (78), Expect = 0.18 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 8/79 (10%) Frame = -3 Query: 523 NLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKD--------EDNMEILEEIAELAKHCL 368 ++D+IG+ + + ++ + +K L+ ILD+ I D E E +E+ E AK C+ Sbjct: 1006 DMDSIGESE-VRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYDEMMEAAKDCV 1064 Query: 367 EMSGENRPSMKEVAEKLDR 311 +NR KE+ EKL++ Sbjct: 1065 HEEEKNR---KEILEKLEK 1080
>HSP77_YEAST (P12398) Heat shock protein SSC1, mitochondrial precursor| (Endonuclease SCEI 75 kDa subunit) (mtHSP70) Length = 654 Score = 34.7 bits (78), Expect = 0.18 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = -3 Query: 514 AIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMK 335 A +D S+++ S + EN +E +++D K + E ++ E A +++ + S+K Sbjct: 515 ATNKDSSITVAGSSGLSENEIEQMVNDAEKFKSQDEARKQAIETANKADQLANDTENSLK 574 Query: 334 EVAEKLDR 311 E K+D+ Sbjct: 575 EFEGKVDK 582
>RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-associated protein| 1 (PRAX-1) (RIM-binding protein 1) (RIM-BP1) Length = 1847 Score = 34.3 bits (77), Expect = 0.24 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -3 Query: 433 GIKDEDNMEILEEIAELAKHCLEMSGEN----RPSMKEVAEKLDRLRK 302 G D N+E+L + EL +HC + EN + S E EK+ RL++ Sbjct: 115 GFGDRPNLELLRALGELQQHCTILKEENQMLRKSSFPETEEKVRRLKR 162
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 34.3 bits (77), Expect = 0.24 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEI-LEEIAELAKH 374 ELL+ KKP + + G+D +L +E R ILD + + + ++ L ++A Sbjct: 1054 ELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQ 1113 Query: 373 CLEMSGENRPSMKEVAEKLDRLRKV 299 CL+ RP+M +V L +V Sbjct: 1114 CLDDRPFKRPTMIQVMTMFKELVQV 1138
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 34.3 bits (77), Expect = 0.24 Identities = 18/68 (26%), Positives = 36/68 (52%) Frame = -3 Query: 508 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 329 G+ K + + +L ++D+ ++D+ +ME ++A LA CL + RP+M EV Sbjct: 288 GEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEV 347 Query: 328 AEKLDRLR 305 L+ ++ Sbjct: 348 VSHLEHIQ 355
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 33.5 bits (75), Expect = 0.41 Identities = 16/66 (24%), Positives = 36/66 (54%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 284 + RL ++D ++ + ++ +IA LA C+ + ++RP+M E+ + ++ L Sbjct: 302 KRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEASK 361 Query: 283 VQRNPE 266 Q+NP+ Sbjct: 362 EQQNPQ 367
>HIS2_METMA (Q8PUG2) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 104 Score = 33.1 bits (74), Expect = 0.54 Identities = 17/56 (30%), Positives = 33/56 (58%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVM 296 E +E IL +++ED+ EI+ E ++L H L + N +++E+A++L + M Sbjct: 48 EESIETIL--AVRNEDHREIVSESSDLIFHLLVLLAANNITLEEIADELSTRHEKM 101
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 33.1 bits (74), Expect = 0.54 Identities = 20/79 (25%), Positives = 39/79 (49%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHC 371 ELLT K+P ++ + L + E+R + D I ++N + + + E+A C Sbjct: 928 ELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLC 987 Query: 370 LEMSGENRPSMKEVAEKLD 314 L + + RP+ +++ LD Sbjct: 988 LSENPKQRPTTQQLVSWLD 1006
>HIS2_BACC1 (P62346) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 107 Score = 32.7 bits (73), Expect = 0.70 Identities = 19/64 (29%), Positives = 35/64 (54%) Frame = -3 Query: 508 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 329 G+DK L + E EVI+ K+ DN E+++EI ++ HC + E S++++ Sbjct: 32 GEDKILKKI-----GEECTEVIIAS--KNNDNEELVKEIVDVLYHCFVLLAEKNISLEDI 84 Query: 328 AEKL 317 E++ Sbjct: 85 MEEV 88
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 32.3 bits (72), Expect = 0.92 Identities = 14/49 (28%), Positives = 30/49 (61%) Frame = -3 Query: 445 ILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKV 299 ++D+ ++D+ +ME ++A L+ CL + RP+M EV L+ ++ + Sbjct: 308 VIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSL 356
>NEK9_XENLA (Q7ZZC8) Serine/threonine-protein kinase Nek9 (EC 2.7.11.1)| (NimA-related protein kinase 9) (XNek9) (Nercc1 kinase) Length = 944 Score = 32.3 bits (72), Expect = 0.92 Identities = 20/71 (28%), Positives = 34/71 (47%) Frame = -3 Query: 418 DNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLLGEP 239 DN +E+ E+ CLE E RP+ E+ E R ++ W +R+ EE S+L Sbjct: 255 DNTVYTQELIEVVHACLEQDPEKRPTADEILE-----RPIL--SWRRRDMEEKVSMLNRS 307 Query: 238 SAMVHSTIVSD 206 + + V++ Sbjct: 308 NKKPRTGTVTE 318
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 32.3 bits (72), Expect = 0.92 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEE-------- 395 E+L+ K+P + + G + M A + +EVI +D +K+ + + E+ Sbjct: 1035 EILSGKRPTDKEEFGDTNLVGWSKMKAREGKHMEVIDEDLLKEGSSESLNEKEGFEGGVI 1094 Query: 394 ------IAELAKHCLEMSGENRPSMKEVAEKLDRLR 305 E+A C++ RP+M +V L LR Sbjct: 1095 VKEMLRYLEIALRCVDDFPSKRPNMLQVVASLRELR 1130
>RIMB1_MOUSE (Q7TNF8) Peripheral-type benzodiazepine receptor-associated protein| 1 (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1846 Score = 32.3 bits (72), Expect = 0.92 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Frame = -3 Query: 433 GIKDEDNMEILEEIAELAKHCLEMSGEN----RPSMKEVAEKLDRL-RKVMHHPWVQRNP 269 G D N+E+L + EL + C + EN + S E EK+ RL RK + + Sbjct: 115 GFGDRPNLELLRALGELQQRCTILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRL 174 Query: 268 EEMESLLGEPSAMVHSTIVSDQYFSIE 188 EE L E + V S V S+E Sbjct: 175 EERAQKLQETNMRVVSAPVPRPGSSLE 201
>DYHC_TRIGR (P23098) Dynein beta chain, ciliary| Length = 4466 Score = 32.0 bits (71), Expect = 1.2 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = -3 Query: 502 DKSLSMMFMSAMKENRLEVILDDGIKDEDNMEIL-EEIAELAKHCLEMSGENRPSMKEVA 326 DK + ++ + K ++ + I DD +E + I+ EE+++ AK C E + P++ Sbjct: 3085 DKLIQVVGVETEKVSKEKAIADD---EEKKVAIINEEVSKKAKDCSEDLAKAEPALLAAQ 3141 Query: 325 EKLDRLRKVMHHPWVQRNPEEMESLLGEPSAMV 227 E L+ L K N E++S PSA++ Sbjct: 3142 EALNTLNK--------NNLTELKSFGSPPSAVL 3166
>SYV_GLOVI (Q7NCQ9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 897 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = -3 Query: 388 ELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLLGEP 239 ELAK LE R + + +A LDR +++ HPW+ EE+ LL +P Sbjct: 669 ELAKPRLEALETRRGAQQVLAAVLDRTLRLL-HPWMPHLSEEIWQLLHQP 717
>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein| 1 (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1857 Score = 32.0 bits (71), Expect = 1.2 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Frame = -3 Query: 520 LDAIGQDKSLSMMFMSAMKENRLEVILDDGIK----DEDNMEILEEIAELAKHCLEMSGE 353 L ++GQ S S ++ +E L + D N+E+L + EL + C + E Sbjct: 84 LPSLGQQASSSGPACQRPEDEEVEAFLKAKLNMSFGDRPNLELLRALGELRQRCAILKEE 143 Query: 352 N----RPSMKEVAEKLDRLRK 302 N + S E EK+ RL++ Sbjct: 144 NQMLRKSSFPETEEKVRRLKR 164
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3| (EC 2.7.11.1) Length = 1309 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Frame = -3 Query: 406 ILEEIAELAKHCLEMSGENRPSMK---EVAEKLDRLRKVMH 293 I +I ELA+ CL SGEN + + E+ EKL+RL + H Sbjct: 214 IHHQIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAH 254
>HIS2_METAC (P58834) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 104 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/56 (30%), Positives = 31/56 (55%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVM 296 E +E IL +++ED+ EI+ E ++L H L + N ++ E+A +L + M Sbjct: 48 EESIETIL--AVRNEDHKEIVSESSDLIFHLLVLLAANNVTLDEIAGELSARHEKM 101
>HIS1_THEMA (Q9X0D2) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 208 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = -3 Query: 421 EDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHH 290 E+N+EIL+EI + H + R +EV L++L++V+ H Sbjct: 157 ENNLEILDEIFVIRTHVVVNPVSYRTKREEVVSFLEKLQEVIEH 200
>TPM4_MOUSE (Q6IRU2) Tropomyosin alpha-4 chain (Tropomyosin-4)| Length = 247 Score = 31.2 bits (69), Expect = 2.0 Identities = 20/49 (40%), Positives = 29/49 (59%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 317 E ++VI + +KDE+ MEILE + AKH ++ E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEILEMQLKEAKH---ITDEADRKYEEVARKL 132
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 31.2 bits (69), Expect = 2.0 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMF----MSAMKENRLEVILDDGIK-DEDNMEILEEIAE 386 EL+T +K +LD ++S+ ++ M KE + +D I DE+ + + +AE Sbjct: 785 ELITGRK--SLDESQPEESIHLVSWFKRMYINKEASFKKAIDTTIDLDEETLASVHTVAE 842 Query: 385 LAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEM 260 LA HC RP M L L ++ +NPE++ Sbjct: 843 LAGHCCAREPYQRPDMGHAVNILSSLVELWKPS--DQNPEDI 882
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = -3 Query: 550 ELLTCKKPFNLDAIGQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEI-LEEIAELAKH 374 ELL+ KKP + G+D +L +E R ILD + + + ++ L ++A Sbjct: 1056 ELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQ 1115 Query: 373 CLEMSGENRPSM 338 CL+ RP+M Sbjct: 1116 CLDDRPFKRPTM 1127
>TWINE_DROME (Q03019) Cdc25-like protein phosphatase twine (EC 3.1.3.48)| Length = 426 Score = 31.2 bits (69), Expect = 2.0 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Frame = -3 Query: 454 LEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRP--SMKEVAEKLDRLRKVMHHPWV 281 LEV+L +K E N+E + + CL M +P +++E ++ + K M + Sbjct: 145 LEVLLSGQLKSESNLEEMSNKKGSLRRCLSMYPSEQPEEAVQEPDQETNMPMKKMQRKTL 204 Query: 280 QRNPEEMESLLGEPSAMV 227 N E+ LG+ ++ Sbjct: 205 SMNDAEIMRALGDEPELI 222
>DYHC_ANTCR (P39057) Dynein beta chain, ciliary| Length = 4466 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Frame = -3 Query: 502 DKSLSMMFMSAMKENRLEVILDDGIKDEDNMEIL-EEIAELAKHCLEMSGENRPSMKEVA 326 DK + ++ + K ++ + +DD +E + I+ EE+++ AK C E + P++ Sbjct: 3085 DKLIQVVGVETEKVSKEKATVDD---EEKKVAIINEEVSKKAKDCSEDLAKAEPALLAAQ 3141 Query: 325 EKLDRLRKVMHHPWVQRNPEEMESLLGEPSAMV 227 E L+ L K N E++S PSA++ Sbjct: 3142 EALNTLNK--------NNLTELKSFGSPPSAVL 3166
>HIS2_SYNEL (Q8DM88) Histidine biosynthesis bifunctional protein hisIE| [Includes: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)] Length = 214 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/59 (30%), Positives = 31/59 (52%) Frame = -3 Query: 478 MSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRK 302 + + E EV++ KD+D I E+A+L H L +R S+++V E+L R+ Sbjct: 158 LKKLGEETAEVVM--ACKDDDPEAIASEVADLFYHTLVALAYHRVSLRQVYEQLQLRRR 214
>HIS2_BACHK (Q6HLE1) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 107 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/64 (28%), Positives = 34/64 (53%) Frame = -3 Query: 508 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 329 G+DK L + E EVI+ K+ DN E+++E+ ++ HC + E +K++ Sbjct: 32 GEDKILKKI-----GEECSEVIIAS--KNNDNEELVKEMVDVLYHCFVLLAEKNIPLKDI 84 Query: 328 AEKL 317 E++ Sbjct: 85 MEEV 88
>HIS2_BACCZ (Q63DW6) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 107 Score = 30.8 bits (68), Expect = 2.7 Identities = 18/64 (28%), Positives = 34/64 (53%) Frame = -3 Query: 508 GQDKSLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEV 329 G+DK L + E EVI+ K+ DN E+++E+ ++ HC + E +K++ Sbjct: 32 GEDKILKKI-----GEECSEVIIAS--KNNDNEELVKEMVDVLYHCFVLLAEKNIPLKDI 84 Query: 328 AEKL 317 E++ Sbjct: 85 MEEV 88
>TATB_VIBPA (Q87TH0) Sec-independent protein translocase protein tatB homolog| Length = 132 Score = 30.4 bits (67), Expect = 3.5 Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 2/88 (2%) Frame = -3 Query: 436 DGIKDEDNMEI-LEEIAELAKHCLEMSGEN-RPSMKEVAEKLDRLRKVMHHPWVQRNPEE 263 + +KDE + E+ ++E+ E + +M E+ P +K E+L + + ++ P+ + E Sbjct: 44 NSVKDELSHELKVQELQENLRKAEQMGMEDLSPELKSSVEELKKAAQSVNRPYADKAQSE 103 Query: 262 MESLLGEPSAMVHSTIVSDQYFSIEKKA 179 E+ EP + + + +KKA Sbjct: 104 TETAKAEPVTESAEKVEEIKVSAADKKA 131
>Y134_MYCPN (P75264) ABC transporter ATP-binding protein MG187 homolog| (E07_orf586) Length = 586 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = -3 Query: 496 SLSMMFMSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 317 +L + S K+ + + L DG E L +I EL K + + + KEVAEKL Sbjct: 295 NLKKQYRSYFKQLKAKYSLKDGNLTESE---LSQIEELQKRIVSLKDFINRTAKEVAEKL 351 Query: 316 DRLRKVMH 293 + + K++H Sbjct: 352 E-ITKILH 358
>Y3528_METJA (Q60287) Hypothetical protein MJECL28| Length = 1272 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = -3 Query: 427 KDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHH 290 KD+D L+E K CLE E + +KE+ E DR K ++H Sbjct: 1011 KDDDKKSNLDE--NTIKKCLEEINEYKKIVKEINENEDRKTKKIYH 1054
>STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)| Length = 831 Score = 30.4 bits (67), Expect = 3.5 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 306 GRLCIIHGCNGTLKRWKAYLGNPRQWS 226 G + I H +G L WK NPRQW+ Sbjct: 352 GTMIIAHAFHGALHLWKQSTVNPRQWA 378
>MUKB_VIBCH (Q9KRC8) Chromosome partition protein mukB (Structural maintenance| of chromosome-related protein) Length = 1491 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Frame = -3 Query: 505 QDKSLSMMFMSAMKENRLEVILDDG----IKDEDNMEILEEIAELAKHCLEMSGENRPSM 338 Q +S+ + K++R V+LDD ++ E + +LEE+ ++C E G+ R Sbjct: 531 QQRSVRELATQYHKQHR--VVLDDAATVELERERHSALLEELETEQENCREQRGQLRHQE 588 Query: 337 KEVAEKLDRLRKVMHHPWVQRNPEEMESLLGEPSA 233 +E+ ++ R + W++ N + +E+L + A Sbjct: 589 QELQTQIARFESIA-PAWIKAN-DALETLREQSGA 621
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +1 Query: 229 PLPRVPQVSFPSLQGSVAPMDDA*PSSAYRASLQLPSLRACSHQTSPNNAL 381 PLP PQ +FP G+ AP+ + S+ + QLP + S T+P L Sbjct: 425 PLPLRPQTNFP---GAQAPLQNPYAYSSQLPTSQLPPQQNISRATAPQTPL 472
>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)| Length = 821 Score = 29.6 bits (65), Expect = 5.9 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -1 Query: 306 GRLCIIHGCNGTLKRWKAYLGNPRQWS 226 G + I H +G + WK NPRQW+ Sbjct: 352 GSMIIAHAFHGAMHLWKQSTVNPRQWA 378
>SYR2_BACAN (Q81R81) Arginyl-tRNA synthetase 2 (EC 6.1.1.19) (Arginine--tRNA| ligase 2) (ArgRS 2) Length = 562 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Frame = -3 Query: 499 KSLSMMFMSAMKENRLEVILDDGIKDEDNM-------EILEEIAELAKHCLEMSGENRPS 341 K L ++ M+ IL DG K E+LEE ELAK +E N Sbjct: 347 KKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLKQ 406 Query: 340 MKEVAEKLDRLRKVMH 293 +EVA+++ + H Sbjct: 407 KEEVAKQVGAGAVIFH 422
>GRHL3_HUMAN (Q8TE85) Grainyhead-like protein 3 homolog (Sister of mammalian| grainyhead) (Transcription factor CP2-like 4) Length = 626 Score = 29.6 bits (65), Expect = 5.9 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = +1 Query: 229 PLPRVPQVSFPSLQGSVAPMDDA*PSSAYRASLQLPSLRACSHQTSPNNALPA 387 P+ +P V F SLQ S A PSS+ R LP R CS T LP+ Sbjct: 456 PVLFIPNVHFSSLQRSGGAAPSAGPSSSNR----LPLKRTCSPFTEEFEPLPS 504
>TPM4_RAT (P09495) Tropomyosin alpha-4 chain (Tropomyosin-4) (TM-4)| Length = 247 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 317 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>TPM4_PIG (P67937) Tropomyosin alpha-4 chain (Tropomyosin-4)| Length = 247 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 317 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>TPM4_HUMAN (P67936) Tropomyosin alpha-4 chain (Tropomyosin-4) (TM30p1)| Length = 247 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 317 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>TPM4_HORSE (P02561) Tropomyosin alpha-4 chain (Tropomyosin-4) (Platelet beta| tropomyosin) Length = 247 Score = 29.6 bits (65), Expect = 5.9 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKL 317 E ++VI + +KDE+ MEI E + AKH E E +EVA KL Sbjct: 87 ERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAE---EADRKYEEVARKL 132
>CKI1_SCHPO (P40233) Casein kinase I homolog 1 (EC 2.7.11.1)| Length = 446 Score = 29.6 bits (65), Expect = 5.9 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = +1 Query: 181 LSSRC*NIDH*QSSSGPLPRVPQVSFPSLQGSVAPMDDA*PSSAYRASLQLPSLRACSHQ 360 L SR ++ +SS P P++ S P+LQ + + S Y P L + S Sbjct: 307 LKSRNAETENQRSSKPPAPKLESKS-PALQNHASTQNVVSKRSDYEKPFAEPHLNSASDS 365 Query: 361 TSPN-NALPAP 390 PN N+LP P Sbjct: 366 AEPNQNSLPNP 376
>TPM2_RAT (P58775) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.9 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 284 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 283 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 179 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>TPM2_RABIT (P58776) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.9 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 284 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 283 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 179 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>TPM2_MOUSE (P58774) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.9 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 284 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 283 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 179 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>TPM2_HUMAN (P07951) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.6 bits (65), Expect = 5.9 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 284 E ++VI + +KDE+ ME+ E + AKH E S +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAEDSDR---KYEEVARKLVILEGELERS- 179 Query: 283 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 179 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>YE56_CAEEL (P90747) Probable cation-transporting ATPase C10C6.6 in chromosome IV| (EC 3.6.3.-) Length = 1178 Score = 29.6 bits (65), Expect = 5.9 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%) Frame = -3 Query: 346 PSMKEVAE-KLDRLRKVMHHPWVQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA--V 176 P M A+ +LD L K + + + ++ + P +++I S + + + V Sbjct: 904 PPMANAAQARLDNLMKELEEEEKAQVIKLGDASIAAPFTSKYTSIASICHVIKQGRCTLV 963 Query: 175 TNLQSGR*VIAPNYFVSKQSIN-LYMFVIYFSLTISTVIGLFMVTCILXL 29 T LQ + ++A N VS S++ LY+ + FS T +T+ GL + C L + Sbjct: 964 TTLQMFK-ILALNALVSAYSLSALYLDGVKFSDTQATIQGLLLAACFLFI 1012
>STTP1_HUMAN (Q6IA86) Stat3-interacting protein (StIP1) (SHINC-2)| Length = 826 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -1 Query: 306 GRLCIIHGCNGTLKRWKAYLGNPRQWS 226 G + I H +G L WK NPR+W+ Sbjct: 353 GSMIIAHAFHGALHLWKQNTVNPREWT 379
>GUC2C_CAVPO (P70106) Heat-stable enterotoxin receptor precursor (GC-C)| (Intestinal guanylate cyclase) (EC 4.6.1.2) (STA receptor) (Guanylyl cyclase C) Length = 1076 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -3 Query: 397 EIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLL 248 E+ L K+C E E RP K++ L ++ + H Q+N M++L+ Sbjct: 722 EVFLLVKNCWEEDPEKRPDFKKIENTLAKIFGLFHD---QKNESYMDTLI 768
>GUC2C_PIG (P55204) Heat-stable enterotoxin receptor precursor (GC-C)| (Intestinal guanylate cyclase) (EC 4.6.1.2) (STA receptor) Length = 1073 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -3 Query: 397 EIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPWVQRNPEEMESLL 248 E+ L K+C E E RP K++ L ++ + H Q+N M++L+ Sbjct: 719 EVYLLVKNCWEEDPEKRPDFKKIENTLAKIFGLFHD---QKNESYMDTLI 765
>ZO3_MOUSE (Q9QXY1) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 905 Score = 29.3 bits (64), Expect = 7.8 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = -2 Query: 431 DQGRGQHGDS*RNSGAGKALFGDVW*EQALNEGSCREAR*AEEGYASSMGATE 273 D GRG GDS +SG+G++ W E++ + R R G SS G +E Sbjct: 117 DHGRGYEGDS--SSGSGRS-----WGERSRRSRAGRRGRVGSHGRRSSGGGSE 162
>TPM2_CHICK (P19352) Tropomyosin beta chain (Tropomyosin 2) (Beta-tropomyosin)| Length = 284 Score = 29.3 bits (64), Expect = 7.8 Identities = 29/95 (30%), Positives = 45/95 (47%) Frame = -3 Query: 463 ENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDRLRKVMHHPW 284 E ++VI + +KDE+ ME+ E + AKH E E +EVA KL L + Sbjct: 124 ERGMKVIENRAMKDEEKMELQEMQLKEAKHIAE---EADRKYEEVARKLVVLEGELERS- 179 Query: 283 VQRNPEEMESLLGEPSAMVHSTIVSDQYFSIEKKA 179 + E ES G+ + IV++ S+E +A Sbjct: 180 -EERAEVAESKCGDLEEEL--KIVTNNLKSLEAQA 211
>HIS2_NITEU (Q82WM7) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 112 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -3 Query: 478 MSAMKENRLEVILDDGIKDEDNMEILEEIAELAKHCLEMSGENRPSMKEVAEKLDR 311 + + E E I+ KD D +I+ E A+L HCL M + S +++ +L+R Sbjct: 39 LKKIAEEAAETIM--ACKDNDREQIIYETADLWFHCLIMLTRHDISPEDILRELER 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,037,157 Number of Sequences: 219361 Number of extensions: 1475502 Number of successful extensions: 4638 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 4508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4635 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
