ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah62d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 408 e-111
2dbj|AK069706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 408 e-111
3ref|XM_481414.1| Oryza sativa (japonica cultivar-group), mRNA 396 e-107
4gb|AY108443.1| Zea mays PCO082434 mRNA sequence 355 1e-94
5gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 145 2e-31
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
7dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
8ref|NM_121148.1| Arabidopsis thaliana unknown protein AT5G11100 ... 62 2e-06
9emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC... 62 2e-06
10ref|NM_100429.1| Arabidopsis thaliana unknown protein AT1G05500 ... 50 0.008
11gb|BT008907.1| Arabidopsis thaliana At1g05500 mRNA, complete cds 50 0.008
12gb|AY140038.1| Arabidopsis thaliana Ca2+-dependent lipid-binding... 50 0.008
13gb|BT013623.1| Lycopersicon esculentum clone 132425F, mRNA sequence 48 0.031
14gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana... 48 0.031
15gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genom... 48 0.031
16ref|XM_474098.1| Oryza sativa (japonica cultivar-group), predic... 44 0.48
17gb|AC069435.19| Homo sapiens 3 BAC RP11-384L1 (Roswell Park Canc... 44 0.48
18gb|AC023158.28| Homo sapiens 12 BAC RP11-438D14 (Roswell Park Ca... 44 0.48
19gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete se... 42 1.9
20gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete se... 42 1.9
21emb|AL138689.22| Human DNA sequence from clone RP11-272L14 on ch... 42 1.9
22gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome... 40 7.5
23gb|AF509496.1| Chlamydomonas reinhardtii strain CC-125 putative ... 40 7.5
24emb|CR956426.6| Pig DNA sequence from clone CH242-42M23 on chrom... 40 7.5
25emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 ... 40 7.5
26gb|AC004513.1|HUAC004513 Homo sapiens Chromosome 16 BAC clone CI... 40 7.5
27gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome... 40 7.5
28emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chro... 40 7.5
29gb|AC148405.5| Medicago truncatula clone mth2-37m7, complete seq... 40 7.5
30gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, compl... 40 7.5
31gb|DP000042.1| Lemur catta target 106 genomic scaffold 40 7.5
32gb|AF509497.1| Chlamydomonas reinhardtii strain C-9 putative amt... 40 7.5
33gb|AC156568.3| Mus musculus BAC clone RP23-291D3 from chromosome... 40 7.5
34gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E... 40 7.5
35gb|AC040174.5| Homo sapiens chromosome 16 clone RP11-96H17, comp... 40 7.5
36gb|AC083862.2|AC083862 Homo sapiens chromosome 7 clone RP11-134L... 40 7.5
37emb|AJ000238.1|HVJ000238 Hordeum vulgare mRNA for expressed sequ... 40 7.5
38emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.5
39gb|AF148956.1|AF148956 Oryctolagus cuniculus lens-specific calpa... 40 7.5 
>dbj|AK119574.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B03, full
            insert sequence
          Length = 2075

 Score =  408 bits (206), Expect = e-111
 Identities = 348/395 (88%), Gaps = 1/395 (0%)
 Strand = Plus / Minus

                                                                        
Query: 157  tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 216
            ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 1904 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 1845

                                                                        
Query: 217  agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 276
            |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 1844 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 1785

                                                                        
Query: 277  cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatg 336
            |||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1784 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcctttccaaacg 1725

                                                                        
Query: 337  tatcatggtcccatacttncaccataagcaaatcatgcagggcatcttctactacaaaat 396
            ||||||| |||||||||| |||||| || |||||||||| ||||||||| || |||||||
Sbjct: 1724 tatcatgatcccatacttccaccatgagtaaatcatgcaaggcatcttcaacaacaaaat 1665

                                                                        
Query: 397  caaatgtctgattccatatcggattcaatgtctcagtcacaacccttgtcttctttttgg 456
            |||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1664 caaacgtctgattccatattggattcagtgtctcagttacaacccttgtcttctttttgg 1605

                                                                        
Query: 457  tttcccccttcttnaggtacaggaccacaaatgggtcagccttnccccatcacatccatt 516
            |||| |||||||| ||||||||||| |||||||||||||||||  |||||||||||||||
Sbjct: 1604 tttctcccttcttcaggtacaggactacaaatgggtcagccttg-cccatcacatccatt 1546

                                               
Query: 517  gctggtatgtcctctgcagatataacagttactga 551
            | ||| | ||||||||| || ||||||||||||||
Sbjct: 1545 ggtggcaagtcctctgctgagataacagttactga 1511
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>dbj|AK069706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028A22, full
            insert sequence
          Length = 2255

 Score =  408 bits (206), Expect = e-111
 Identities = 348/395 (88%), Gaps = 1/395 (0%)
 Strand = Plus / Minus

                                                                        
Query: 157  tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 216
            ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 1905 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 1846

                                                                        
Query: 217  agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 276
            |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 1845 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 1786

                                                                        
Query: 277  cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatg 336
            |||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1785 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcctttccaaacg 1726

                                                                        
Query: 337  tatcatggtcccatacttncaccataagcaaatcatgcagggcatcttctactacaaaat 396
            ||||||| |||||||||| |||||| || |||||||||| ||||||||| || |||||||
Sbjct: 1725 tatcatgatcccatacttccaccatgagtaaatcatgcaaggcatcttcaacaacaaaat 1666

                                                                        
Query: 397  caaatgtctgattccatatcggattcaatgtctcagtcacaacccttgtcttctttttgg 456
            |||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1665 caaacgtctgattccatattggattcagtgtctcagttacaacccttgtcttctttttgg 1606

                                                                        
Query: 457  tttcccccttcttnaggtacaggaccacaaatgggtcagccttnccccatcacatccatt 516
            |||| |||||||| ||||||||||| |||||||||||||||||  |||||||||||||||
Sbjct: 1605 tttctcccttcttcaggtacaggactacaaatgggtcagccttg-cccatcacatccatt 1547

                                               
Query: 517  gctggtatgtcctctgcagatataacagttactga 551
            | ||| | ||||||||| || ||||||||||||||
Sbjct: 1546 ggtggcaagtcctctgctgagataacagttactga 1512
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>ref|XM_481414.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1698

 Score =  396 bits (200), Expect = e-107
 Identities = 339/385 (88%), Gaps = 1/385 (0%)
 Strand = Plus / Minus

                                                                        
Query: 167  tcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttgaagtgcaggtt 226
            |||||| ||||  ||||||||||| ||||||||||| | |||||| |||||||||| |||
Sbjct: 1698 tcactggtcccgatcacgatcacgataaattggctgcggcgtccacttgaagtgcaagtt 1639

                                                                        
Query: 227  cagccttccagatttagcaccttgcagcgcatatgtatcttggaactcaccttcaagtat 286
            |||| |||| ||||||||||||||||   || |   ||| || ||||| ||||| |||||
Sbjct: 1638 cagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgccttcgagtat 1579

                                                                        
Query: 287  cgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatgtatcatggtc 346
              |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 1578 tactctcgtaagtgtcaagatgcatctccctatgtaatcctttccaaacgtatcatgatc 1519

                                                                        
Query: 347  ccatacttncaccataagcaaatcatgcagggcatcttctactacaaaatcaaatgtctg 406
            |||||||| |||||| || |||||||||| ||||||||| || ||||||||||| |||||
Sbjct: 1518 ccatacttccaccatgagtaaatcatgcaaggcatcttcaacaacaaaatcaaacgtctg 1459

                                                                        
Query: 407  attccatatcggattcaatgtctcagtcacaacccttgtcttctttttggtttccccctt 466
            ||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1458 attccatattggattcagtgtctcagttacaacccttgtcttctttttggtttctccctt 1399

                                                                        
Query: 467  cttnaggtacaggaccacaaatgggtcagccttnccccatcacatccattgctggtatgt 526
            ||| ||||||||||| |||||||||||||||||  |||||||||||||||| ||| | ||
Sbjct: 1398 cttcaggtacaggactacaaatgggtcagccttg-cccatcacatccattggtggcaagt 1340

                                     
Query: 527  cctctgcagatataacagttactga 551
            ||||||| || ||||||||||||||
Sbjct: 1339 cctctgctgagataacagttactga 1315
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>gb|AY108443.1| Zea mays PCO082434 mRNA sequence
          Length = 1548

 Score =  355 bits (179), Expect = 1e-94
 Identities = 294/333 (88%)
 Strand = Plus / Minus

                                                                        
Query: 167  tcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttgaagtgcaggtt 226
            |||||||||||||||||||||||| || |||||||||| |||||| ||||| |||| |||
Sbjct: 1182 tcactgatccctgtcacgatcacgatagattggctgtggcgtccacttgaaatgcaagtt 1123

                                                                        
Query: 227  cagccttccagatttagcaccttgcagcgcatatgtatcttggaactcaccttcaagtat 286
             ||  |||| ||||| ||||||||||   || | ||||||||||| |||||||| |||||
Sbjct: 1122 tagttttcccgatttggcaccttgcaagacaaaggtatcttggaattcaccttcgagtat 1063

                                                                        
Query: 287  cgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatgtatcatggtc 346
              |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1062 aactctcgtcagtgtcaagatgcacctccctatgtaatcctttccaaatgtatcatggtc 1003

                                                                        
Query: 347  ccatacttncaccataagcaaatcatgcagggcatcttctactacaaaatcaaatgtctg 406
            |||||||| |||||| |||||||||||||| ||||||||||| |  ||||||||||||||
Sbjct: 1002 ccatacttccaccatgagcaaatcatgcagtgcatcttctaccatgaaatcaaatgtctg 943

                                                                        
Query: 407  attccatatcggattcaatgtctcagtcacaacccttgtcttctttttggtttccccctt 466
             |||||||| ||||| || || || ||||||||||| ||||||||||||||||| |||||
Sbjct: 942  gttccatattggatttaacgtgtctgtcacaaccctcgtcttctttttggtttctccctt 883

                                             
Query: 467  cttnaggtacaggaccacaaatgggtcagcctt 499
            ||| | |||||||||||||||||||||||||||
Sbjct: 882  ctttaagtacaggaccacaaatgggtcagcctt 850
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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score =  145 bits (73), Expect = 2e-31
 Identities = 105/115 (91%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                         
Query: 437   aacccttgtcttctttttggtttcccccttcttnaggtacaggaccacaaatgggtcagc 496
             |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 68185 aacccttgtcttctttttggtttctcccttcttcaggtacaggactacaaatgggtcagc 68126

                                                                    
Query: 497   cttnccccatcacatccattgctggtatgtcctctgcagatataacagttactga 551
             |||  |||||||||||||||| ||| | ||||||||| || ||||||||||||||
Sbjct: 68125 cttg-cccatcacatccattggtggcaagtcctctgctgagataacagttactga 68072



 Score =  141 bits (71), Expect = 3e-30
 Identities = 146/171 (85%)
 Strand = Plus / Minus

                                                                         
Query: 157   tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 216
             ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 69177 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 69118

                                                                         
Query: 217   agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 276
             |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 69117 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 69058

                                                                
Query: 277   cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcct 327
             |||| |||||  |||| ||||||||||||||||||||||||||||||||||
Sbjct: 69057 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcct 69007



 Score =  137 bits (69), Expect = 4e-29
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                         
Query: 325   cctttccaaatgtatcatggtcccatacttncaccataagcaaatcatgcagggcatctt 384
             |||||||||| |||||||| |||||||||| |||||| || |||||||||| ||||||||
Sbjct: 68402 cctttccaaacgtatcatgatcccatacttccaccatgagtaaatcatgcaaggcatctt 68343

                                                                     
Query: 385   ctactacaaaatcaaatgtctgattccatatcggattcaatgtctcagtcacaacc 440
             | || ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 68342 caacaacaaaatcaaacgtctgattccatattggattcagtgtctcagttacaacc 68287
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  145 bits (73), Expect = 2e-31
 Identities = 105/115 (91%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                            
Query: 437      aacccttgtcttctttttggtttcccccttcttnaggtacaggaccacaaatgggtcagc 496
                |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 12325646 aacccttgtcttctttttggtttctcccttcttcaggtacaggactacaaatgggtcagc 12325705

                                                                       
Query: 497      cttnccccatcacatccattgctggtatgtcctctgcagatataacagttactga 551
                |||  |||||||||||||||| ||| | ||||||||| || ||||||||||||||
Sbjct: 12325706 cttg-cccatcacatccattggtggcaagtcctctgctgagataacagttactga 12325759



 Score =  141 bits (71), Expect = 3e-30
 Identities = 146/171 (85%)
 Strand = Plus / Plus

                                                                            
Query: 157      tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 216
                ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 12324654 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 12324713

                                                                            
Query: 217      agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 276
                |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 12324714 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 12324773

                                                                   
Query: 277      cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcct 327
                |||| |||||  |||| ||||||||||||||||||||||||||||||||||
Sbjct: 12324774 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcct 12324824



 Score =  137 bits (69), Expect = 4e-29
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                            
Query: 325      cctttccaaatgtatcatggtcccatacttncaccataagcaaatcatgcagggcatctt 384
                |||||||||| |||||||| |||||||||| |||||| || |||||||||| ||||||||
Sbjct: 12325429 cctttccaaacgtatcatgatcccatacttccaccatgagtaaatcatgcaaggcatctt 12325488

                                                                        
Query: 385      ctactacaaaatcaaatgtctgattccatatcggattcaatgtctcagtcacaacc 440
                | || ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 12325489 caacaacaaaatcaaacgtctgattccatattggattcagtgtctcagttacaacc 12325544
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0045D08
          Length = 160541

 Score =  145 bits (73), Expect = 2e-31
 Identities = 105/115 (91%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                         
Query: 437   aacccttgtcttctttttggtttcccccttcttnaggtacaggaccacaaatgggtcagc 496
             |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 84295 aacccttgtcttctttttggtttctcccttcttcaggtacaggactacaaatgggtcagc 84354

                                                                    
Query: 497   cttnccccatcacatccattgctggtatgtcctctgcagatataacagttactga 551
             |||  |||||||||||||||| ||| | ||||||||| || ||||||||||||||
Sbjct: 84355 cttg-cccatcacatccattggtggcaagtcctctgctgagataacagttactga 84408



 Score =  141 bits (71), Expect = 3e-30
 Identities = 146/171 (85%)
 Strand = Plus / Plus

                                                                         
Query: 157   tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 216
             ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 83303 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 83362

                                                                         
Query: 217   agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 276
             |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 83363 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 83422

                                                                
Query: 277   cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcct 327
             |||| |||||  |||| ||||||||||||||||||||||||||||||||||
Sbjct: 83423 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcct 83473



 Score =  137 bits (69), Expect = 4e-29
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                         
Query: 325   cctttccaaatgtatcatggtcccatacttncaccataagcaaatcatgcagggcatctt 384
             |||||||||| |||||||| |||||||||| |||||| || |||||||||| ||||||||
Sbjct: 84078 cctttccaaacgtatcatgatcccatacttccaccatgagtaaatcatgcaaggcatctt 84137

                                                                     
Query: 385   ctactacaaaatcaaatgtctgattccatatcggattcaatgtctcagtcacaacc 440
             | || ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 84138 caacaacaaaatcaaacgtctgattccatattggattcagtgtctcagttacaacc 84193
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>ref|NM_121148.1| Arabidopsis thaliana unknown protein AT5G11100 mRNA, complete cds
          Length = 1725

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 93/114 (81%)
 Strand = Plus / Minus

                                                                        
Query: 311  tctccctatgtaatcctttccaaatgtatcatggtcccatacttncaccataagcaaatc 370
            ||||||||| |  ||||| |||||| | ||||||||||||||||  | | | |  | |||
Sbjct: 1590 tctccctatcttgtccttgccaaatttgtcatggtcccatacttcaagcgtcaatagatc 1531

                                                                  
Query: 371  atgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 424
            |||||  |||||||| |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 1530 atgcaaagcatcttccactacaaaatcaaacgtctggttccaaaccggattcaa 1477
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>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project)
          Length = 96379

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 93/114 (81%)
 Strand = Plus / Minus

                                                                         
Query: 311   tctccctatgtaatcctttccaaatgtatcatggtcccatacttncaccataagcaaatc 370
             ||||||||| |  ||||| |||||| | ||||||||||||||||  | | | |  | |||
Sbjct: 86226 tctccctatcttgtccttgccaaatttgtcatggtcccatacttcaagcgtcaatagatc 86167

                                                                   
Query: 371   atgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 424
             |||||  |||||||| |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 86166 atgcaaagcatcttccactacaaaatcaaacgtctggttccaaaccggattcaa 86113
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>ref|NM_100429.1| Arabidopsis thaliana unknown protein AT1G05500 mRNA, complete cds
          Length = 1587

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                        
Query: 309  catctccctatgtaatcctttccaaatgtatcatggtcccatacttncaccataagcaaa 368
            |||||||| ||||| ||||||||||| || || |||||||| ||||  |  |  |||| |
Sbjct: 1457 catctcccaatgtagtcctttccaaaggtgtcgtggtcccagacttcaaggactagcata 1398

                                                                    
Query: 369  tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 424
            ||||| |   | ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 1397 tcatgtaacccgtcttcaactacaaaatcaaaagtctggttccataccgggttcaa 1342
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>gb|BT008907.1| Arabidopsis thaliana At1g05500 mRNA, complete cds
          Length = 1683

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                        
Query: 309  catctccctatgtaatcctttccaaatgtatcatggtcccatacttncaccataagcaaa 368
            |||||||| ||||| ||||||||||| || || |||||||| ||||  |  |  |||| |
Sbjct: 1553 catctcccaatgtagtcctttccaaaggtgtcgtggtcccagacttcaaggactagcata 1494

                                                                    
Query: 369  tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 424
            ||||| |   | ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 1493 tcatgtaacccgtcttcaactacaaaatcaaaagtctggttccataccgggttcaa 1438
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>gb|AY140038.1| Arabidopsis thaliana Ca2+-dependent lipid-binding protein, putative
            (At1g05500) mRNA, complete cds
          Length = 2052

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                        
Query: 309  catctccctatgtaatcctttccaaatgtatcatggtcccatacttncaccataagcaaa 368
            |||||||| ||||| ||||||||||| || || |||||||| ||||  |  |  |||| |
Sbjct: 1676 catctcccaatgtagtcctttccaaaggtgtcgtggtcccagacttcaaggactagcata 1617

                                                                    
Query: 369  tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 424
            ||||| |   | ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 1616 tcatgtaacccgtcttcaactacaaaatcaaaagtctggttccataccgggttcaa 1561
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>gb|BT013623.1| Lycopersicon esculentum clone 132425F, mRNA sequence
          Length = 2230

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 299  tgtcaagatgcatctccctatgtaatcctttccaaatgtatcatggtcccatactt 354
            |||||| ||||| || || |||||||||||||| || || ||||||||||| ||||
Sbjct: 1738 tgtcaatatgcaccttcccatgtaatcctttccgaaggtgtcatggtcccaaactt 1683
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>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
             complete sequence
          Length = 84203

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 381   tcttctactacaaaatcaaatgtctgattccatatcggattcaa 424
             ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 60660 tcttcaactacaaaatcaaaagtctggttccataccgggttcaa 60617
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>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
             sequence
          Length = 103223

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 381   tcttctactacaaaatcaaatgtctgattccatatcggattcaa 424
             ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 10111 tcttcaactacaaaatcaaaagtctggttccataccgggttcaa 10068
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>ref|XM_474098.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1728

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 90/113 (79%)
 Strand = Plus / Minus

                                                                        
Query: 336  gtatcatggtcccatacttncaccataagcaaatcatgcagggcatcttctactacaaaa 395
            |||||||| ||  |||||| || |||||||| |||||| |   ||||||| || ||||||
Sbjct: 1544 gtatcatgatcatatacttccaacataagcatatcatgtaaaccatcttcgacaacaaaa 1485

                                                                 
Query: 396  tcaaatgtctgattccatatcggattcaatgtctcagtcacaacccttgtctt 448
            ||||| || || ||||| |  ||||||||  | ||  ||||||||||||||||
Sbjct: 1484 tcaaaagtttggttccaaactggattcaagctttcgctcacaacccttgtctt 1432
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>gb|AC069435.19| Homo sapiens 3 BAC RP11-384L1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111861

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 386   tactacaaaatcaaatgtctga 407
             ||||||||||||||||||||||
Sbjct: 68900 tactacaaaatcaaatgtctga 68921
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>gb|AC023158.28| Homo sapiens 12 BAC RP11-438D14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146530

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 20    catatacagaataatattttat 41
             ||||||||||||||||||||||
Sbjct: 83504 catatacagaataatattttat 83483
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>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence
          Length = 124972

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 420   ttcaatgtctcagtcacaacccttg 444
             ||||||||||| |||||||||||||
Sbjct: 92895 ttcaatgtctctgtcacaacccttg 92919
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>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence
          Length = 127295

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 420   ttcaatgtctcagtcacaacccttg 444
             ||||||||||| |||||||||||||
Sbjct: 33586 ttcaatgtctctgtcacaacccttg 33562
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>emb|AL138689.22| Human DNA sequence from clone RP11-272L14 on chromosome 13 Contains the
             EFNB2 gene for ephrin-B2 (HTKL EPLG5 LERK5)and a CpG
             island, complete sequence
          Length = 103616

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 434   cacaacccttgtcttcttttt 454
             |||||||||||||||||||||
Sbjct: 63102 cacaacccttgtcttcttttt 63122
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>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence
          Length = 252587

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 384   tctactacaaaatcaaatgtctgattcc 411
             |||||||||||||||| |||||| ||||
Sbjct: 99153 tctactacaaaatcaagtgtctgtttcc 99126
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>gb|AF509496.1| Chlamydomonas reinhardtii strain CC-125 putative amt protein gene,
           complete cds
          Length = 7383

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 ttggctgtgccgtccatttg 215
           ||||||||||||||||||||
Sbjct: 320 ttggctgtgccgtccatttg 301
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>emb|CR956426.6| Pig DNA sequence from clone CH242-42M23 on chromosome 17, complete
             sequence
          Length = 135274

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   ttgtcttctttttggtttcc 461
             ||||||||||||||||||||
Sbjct: 10354 ttgtcttctttttggtttcc 10373
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>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3,
             complete sequence
          Length = 145085

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   acaaaatcaaatgtctgatt 409
             ||||||||||||||||||||
Sbjct: 16435 acaaaatcaaatgtctgatt 16454
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>gb|AC004513.1|HUAC004513 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-926E7, complete
             sequence
          Length = 101311

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   atcggattcaatgtctcagt 433
             ||||||||||||||||||||
Sbjct: 43490 atcggattcaatgtctcagt 43509
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>gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome 12, complete sequence
          Length = 213946

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    ttgaagtgcaggttcagcct 232
              ||||||||||||||||||||
Sbjct: 197230 ttgaagtgcaggttcagcct 197211
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>emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chromosome 17, complete
            sequence
          Length = 79274

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  ttgtcttctttttggtttcc 461
            ||||||||||||||||||||
Sbjct: 5461 ttgtcttctttttggtttcc 5480
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>gb|AC148405.5| Medicago truncatula clone mth2-37m7, complete sequence
          Length = 115984

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 477    aggaccacaaatgggtcagccttnccc 503
              ||||| ||||||||||||||||| |||
Sbjct: 111981 aggacaacaaatgggtcagccttgccc 111955
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>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence
          Length = 253733

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     acatatacagaataatattttatg 42
              |||||||||||||| |||||||||
Sbjct: 185069 acatatacagaatactattttatg 185092
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>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    acagaataatattttatgac 44
             ||||||||||||||||||||
Sbjct: 80510 acagaataatattttatgac 80491
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>gb|AF509497.1| Chlamydomonas reinhardtii strain C-9 putative amt protein mRNA,
           complete cds
          Length = 2568

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 196 ttggctgtgccgtccatttg 215
           ||||||||||||||||||||
Sbjct: 320 ttggctgtgccgtccatttg 301
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>gb|AC156568.3| Mus musculus BAC clone RP23-291D3 from chromosome 12, complete sequence
          Length = 224350

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   ttgaagtgcaggttcagcct 232
             ||||||||||||||||||||
Sbjct: 14548 ttgaagtgcaggttcagcct 14529
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>gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E1, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    gtagaggaagaggcagtctt 144
              ||||||||||||||||||||
Sbjct: 113781 gtagaggaagaggcagtctt 113762
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>gb|AC040174.5| Homo sapiens chromosome 16 clone RP11-96H17, complete sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   atcggattcaatgtctcagt 433
             ||||||||||||||||||||
Sbjct: 53922 atcggattcaatgtctcagt 53903
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>gb|AC083862.2|AC083862 Homo sapiens chromosome 7 clone RP11-134L10, complete sequence
          Length = 162931

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gtagaggaagaggcagtctt 144
             ||||||||||||||||||||
Sbjct: 51716 gtagaggaagaggcagtctt 51697
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>emb|AJ000238.1|HVJ000238 Hordeum vulgare mRNA for expressed sequence tag
          Length = 300

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 369 tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaatgtc 428
           ||||||| | ||||||| || ||||| ||||| || |||||||| | ||| |||||  | 
Sbjct: 76  tcatgcaagccatcttcgacaacaaagtcaaaagtttgattccaaaccgggttcaagctt 17

                           
Query: 429 tcagtcacaacccttg 444
           ||| ||||||||||||
Sbjct: 16  tcattcacaacccttg 1
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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    tacacggttacaacttacaa 84
             ||||||||||||||||||||
Sbjct: 33617 tacacggttacaacttacaa 33598
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>gb|AF148956.1|AF148956 Oryctolagus cuniculus lens-specific calpain Lp82 mRNA, complete cds
          Length = 2196

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  tgcaggttcagccttccaga 238
            ||||||||||||||||||||
Sbjct: 1813 tgcaggttcagccttccaga 1794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,956,372
Number of Sequences: 3902068
Number of extensions: 4956372
Number of successful extensions: 96334
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 96228
Number of HSP's gapped (non-prelim): 99
length of query: 553
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 530
effective length of database: 17,143,297,704
effective search space: 9085947783120
effective search space used: 9085947783120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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