ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbah61o02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF216582.1|AF216582 Avena sativa fructose 1,6-bisphosphate aldolase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 1577 Score = 377 bits (190), Expect = e-101 Identities = 239/254 (94%), Gaps = 1/254 (0%) Strand = Plus / Minus Query: 309 gatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcg 368 |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||| Sbjct: 1267 gatcagtagctgtagttcttgacgaacatgccctccttggcggccgcggcctcgccgtcg 1208 Query: 369 ctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcc 428 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1207 ctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagaagcgcctcc 1148 Query: 429 tgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagc 488 ||||| |||||||||||||| |||||||||||||||||||||| |||||||||||| || Sbjct: 1147 tgcgccgccgcgacgttctctggccgcccgccccacgtcttgaagcaggtgttctggagt 1088 Query: 489 gccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcagg 548 |||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 1087 gcccgcgcgtaggagaaggatacgtgccacgggttgggcgcctggttcatcgcgttcagg 1028 Query: 549 ttcaagcgtcgcct 562 ||| |||||||||| Sbjct: 1027 ttc-agcgtcgcct 1015 Score = 153 bits (77), Expect = 7e-34 Identities = 97/101 (96%), Gaps = 2/101 (1%) Strand = Plus / Minus Query: 168 gtccatctcttccatcagagctggtctcgacctgtaa-caacgacgacacactggctggc 226 |||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 1400 gtccatctct-ccatcagagctggtctcgacctgtaaacaacgaggacacactgcctggc 1342 Query: 227 taaggtgccctcaagctgctcaaggcgctactagcactctc 267 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 taaggtgccctcaagctgctcaaggcgctactagcactctc 1301
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 303 bits (153), Expect = 3e-79 Identities = 222/245 (90%) Strand = Plus / Plus Query: 307 cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 366 ||||| ||||| ||||||||||||||||||| ||| ||||| | ||||||||||||| Sbjct: 63349 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 63408 Query: 367 cgctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcct 426 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 63409 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgt 63468 Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 63469 cctgcgccgccttcacgttctccggctgcccgccccacgtcttgaggcacgtgttctgca 63528 Query: 487 gcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttca 546 ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 63529 gcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctggttcatcgcgttca 63588 Query: 547 ggttc 551 ||||| Sbjct: 63589 ggttc 63593
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 303 bits (153), Expect = 3e-79 Identities = 222/245 (90%) Strand = Plus / Plus Query: 307 cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 366 ||||| ||||| ||||||||||||||||||| ||| ||||| | ||||||||||||| Sbjct: 3469394 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3469453 Query: 367 cgctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcct 426 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 3469454 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgt 3469513 Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 3469514 cctgcgccgccttcacgttctccggctgcccgccccacgtcttgaggcacgtgttctgca 3469573 Query: 487 gcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttca 546 ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 3469574 gcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctggttcatcgcgttca 3469633 Query: 547 ggttc 551 ||||| Sbjct: 3469634 ggttc 3469638 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 27953571 ctccggccgcccgccccacgtc 27953550 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 24178098 ctccggccgcccgccccacgtc 24178119
>dbj|AK104899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C04, full insert sequence Length = 1492 Score = 303 bits (153), Expect = 3e-79 Identities = 222/245 (90%) Strand = Plus / Minus Query: 307 cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 366 ||||| ||||| ||||||||||||||||||| ||| ||||| | ||||||||||||| Sbjct: 1265 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1206 Query: 367 cgctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcct 426 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 1205 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgt 1146 Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 1145 cctgcgccgccttcacgttctccggctgcccgccccacgtcttgaggcacgtgttctgca 1086 Query: 487 gcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttca 546 ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1085 gcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctggttcatcgcgttca 1026 Query: 547 ggttc 551 ||||| Sbjct: 1025 ggttc 1021
>dbj|AK073758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O18, full insert sequence Length = 1622 Score = 303 bits (153), Expect = 3e-79 Identities = 222/245 (90%) Strand = Plus / Minus Query: 307 cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 366 ||||| ||||| ||||||||||||||||||| ||| ||||| | ||||||||||||| Sbjct: 1261 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 1202 Query: 367 cgctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcct 426 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 1201 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgt 1142 Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 1141 cctgcgccgccttcacgttctccggctgcccgccccacgtcttgaggcacgtgttctgca 1082 Query: 487 gcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttca 546 ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1081 gcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctggttcatcgcgttca 1022 Query: 547 ggttc 551 ||||| Sbjct: 1021 ggttc 1017
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 303 bits (153), Expect = 3e-79 Identities = 222/245 (90%) Strand = Plus / Plus Query: 307 cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 366 ||||| ||||| ||||||||||||||||||| ||| ||||| | ||||||||||||| Sbjct: 3478098 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 3478157 Query: 367 cgctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcct 426 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 3478158 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgt 3478217 Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 3478218 cctgcgccgccttcacgttctccggctgcccgccccacgtcttgaggcacgtgttctgca 3478277 Query: 487 gcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttca 546 ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 3478278 gcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctggttcatcgcgttca 3478337 Query: 547 ggttc 551 ||||| Sbjct: 3478338 ggttc 3478342 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 27972871 ctccggccgcccgccccacgtc 27972850 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 24489767 ctccggccgcccgccccacgtc 24489788
>gb|AY103557.1| Zea mays PCO070710 mRNA sequence Length = 1761 Score = 291 bits (147), Expect = 1e-75 Identities = 216/239 (90%) Strand = Plus / Minus Query: 313 agtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgctgg 372 ||||||||||||||||||||||||| ||| ||||| | ||||||||||||||| || Sbjct: 1404 agtagctgtagttcttgacgaacattccctccttggcctcggcggcctcgccgtcggagg 1345 Query: 373 tgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1344 tgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcgtcctgcg 1285 Query: 433 ctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccc 492 | ||| ||| || |||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 1284 ccgccttgaccttgtccggctggccgccccaggtcttgaggcaggtgttctgcagcgccc 1225 Query: 493 tcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttc 551 |||||||||||||||||||||||||||||| ||| |||||||||| ||||| |||||| Sbjct: 1224 gcgcgtaggagaaggacacgtgccacgggttgggcccctggttcatggcgttgaggttc 1166
>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full insert sequence Length = 2135 Score = 281 bits (142), Expect = 1e-72 Identities = 184/198 (92%) Strand = Plus / Minus Query: 354 gcggcctcgccgtcgctggtgtacttgccgagctgcgccagggagttggccttggcgcgc 413 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1209 gcggcctcgccgtcgctggtgtacttgccgagctgcgccagcgagttggccttggcgcgg 1150 Query: 414 agcagcagcgcctcctgcgctgccgcgacgttctccggccgcccgccccacgtcttgagg 473 || |||||||| |||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 1149 aggagcagcgcgtcctgcgccgccttcacgttctccggctgcccgccccacgtcttgagg 1090 Query: 474 caggtgttctgcagcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctgg 533 || ||||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||| Sbjct: 1089 cacgtgttctgcagcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctgg 1030 Query: 534 ttcatcgcgttcaggttc 551 |||||||||||||||||| Sbjct: 1029 ttcatcgcgttcaggttc 1012
>gb|AF017362.1|AF017362 Oryza sativa aldolase mRNA, complete cds Length = 1302 Score = 280 bits (141), Expect = 5e-72 Identities = 219/245 (89%) Strand = Plus / Minus Query: 307 cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 366 ||||| ||||| ||||||||||||||||||| || ||||| | ||||| ||||||| Sbjct: 1157 cggattagtagacgtagttcttgacgaacatgccttccttggcctcggcggcttcgccgt 1098 Query: 367 cgctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcct 426 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 1097 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcggaggagcagcgcgt 1038 Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| || |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 1037 cctgcgccgctttcacgttctccggctgcccgccccacgtcttgaggcacgtgttctgca 978 Query: 487 gcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttca 546 ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 977 gcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctggttcatcgcgttca 918 Query: 547 ggttc 551 ||||| Sbjct: 917 ggttc 913
>dbj|D13513.1|RICCHLALD Oryza sativa gene for cytoplasmic aldolase, complete cds, clone:Aldp Length = 2915 Score = 280 bits (141), Expect = 5e-72 Identities = 219/245 (89%) Strand = Plus / Minus Query: 307 cggatcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgt 366 ||||| ||||| ||||||||||||||||||| ||| ||||| | ||||||||||||| Sbjct: 2793 cggattagtagacgtagttcttgacgaacatgccctccttggcctcggcggcctcgccgt 2734 Query: 367 cgctggtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcct 426 |||||||||||||||||||||||||||| ||||||||||||||||| || ||||| | Sbjct: 2733 cgctggtgtacttgccgagctgcgccagcgagttggccttggcgcggaggagcaggcggt 2674 Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 2673 cctgcgccgccttcacgttctccggctgcccgccccacgtcttgaggcacgtgttctgca 2614 Query: 487 gcgccctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttca 546 ||||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2613 gcgccctcgcgtacgagaacgacacgtgccacgggttgggcccctggttcatcgcgttca 2554 Query: 547 ggttc 551 ||||| Sbjct: 2553 ggttc 2549
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Minus Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 3543420 cctgcgccgccgcgacgttctcccgccggctgccccacgtcttgaggcaggtgttctgca 3543361 Query: 487 gcgccctcgcgtaggagaaggacacgtgccac 518 ||||||| |||||||||||||| ||| ||||| Sbjct: 3543360 gcgccctggcgtaggagaaggagacgcgccac 3543329 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 311 tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 370 ||||||| |||||||||||||||||||| ||| |||| | ||||||||||||||||| Sbjct: 3543513 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543454 Query: 371 ggtgtacttgccgagctgcgccagggagtt 400 |||||||||||||||||||||||| ||||| Sbjct: 3543453 ggtgtacttgccgagctgcgccagcgagtt 3543424
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Minus Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 3543365 cctgcgccgccgcgacgttctcccgccggctgccccacgtcttgaggcaggtgttctgca 3543306 Query: 487 gcgccctcgcgtaggagaaggacacgtgccac 518 ||||||| |||||||||||||| ||| ||||| Sbjct: 3543305 gcgccctggcgtaggagaaggagacgcgccac 3543274 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 311 tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 370 ||||||| |||||||||||||||||||| ||| |||| | ||||||||||||||||| Sbjct: 3543458 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 3543399 Query: 371 ggtgtacttgccgagctgcgccagggagtt 400 |||||||||||||||||||||||| ||||| Sbjct: 3543398 ggtgtacttgccgagctgcgccagcgagtt 3543369
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Minus Query: 427 cctgcgctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgca 486 ||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 58348 cctgcgccgccgcgacgttctcccgccggctgccccacgtcttgaggcaggtgttctgca 58289 Query: 487 gcgccctcgcgtaggagaaggacacgtgccac 518 ||||||| |||||||||||||| ||| ||||| Sbjct: 58288 gcgccctggcgtaggagaaggagacgcgccac 58257 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Minus Query: 311 tcagtagctgtagttcttgacgaacatgttctctttggcagctgcggcctcgccgtcgct 370 ||||||| |||||||||||||||||||| ||| |||| | ||||||||||||||||| Sbjct: 58441 tcagtaggtgtagttcttgacgaacatgccctcgctggcctcggcggcctcgccgtcgct 58382 Query: 371 ggtgtacttgccgagctgcgccagggagtt 400 |||||||||||||||||||||||| ||||| Sbjct: 58381 ggtgtacttgccgagctgcgccagcgagtt 58352
>emb|AJ011516.1|SDU011516 Scherffelia dubia mRNA for fructose-bisphosphate aldolase Length = 1346 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 465 gtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgccacgggttc 524 ||||||||| |||||||||||| || | ||||||||||||||||||||||||||||| Sbjct: 1001 gtcttgaggacggtgttctgcagagcgcgggcgtaggagaaggacacgtgccacgggttg 942 Query: 525 ggcgcctggttcatcgcgttcaggttca 552 || | ||||||||| ||||||||||||| Sbjct: 941 ggtgactggttcatggcgttcaggttca 914
>gb|BT017456.1| Zea mays clone EL01N0407B10.c mRNA sequence Length = 859 Score = 89.7 bits (45), Expect = 9e-15 Identities = 138/169 (81%) Strand = Plus / Minus Query: 384 agctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgcgacg 443 ||||| ||||| ||||||||||| ||||||| |||||| |||| ||||| ||| | ||| Sbjct: 666 agctgtgccagcgagttggcctttgcgcgcaccagcagggccttttgcgccgcctcaacg 607 Query: 444 ttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggag 503 ||||| || ||||| ||| ||||| || | ||||||||| |||| ||||||||| Sbjct: 606 ttctcggggcgcccttgccatgtcttcagcaccgagttctgcagagcccgggcgtaggag 547 Query: 504 aaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 || || |||||||| |||||||| | |||||||||||| |||||||||| Sbjct: 546 aatgatacgtgccatgggttcggagactggttcatcgcattcaggttca 498
>ref|NM_127705.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G21330 transcript variant AT2G21330.1 mRNA, complete cds Length = 1525 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1076 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1017
>ref|NM_001036309.1| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G21330 transcript variant AT2G21330.2 mRNA, complete cds Length = 1611 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1158 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1099
>gb|AY142633.1| Arabidopsis thaliana putative fructose bisphosphate aldolase (At2g21330) mRNA, complete cds Length = 1231 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1016 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 957
>gb|BT000106.1| Arabidopsis thaliana putative fructose bisphosphate aldolase (At2g21330) mRNA, complete cds Length = 1259 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1016 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 957
>gb|AY035043.1| Arabidopsis thaliana putative fructose bisphosphate aldolase (At2g21330) mRNA, complete cds Length = 1366 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1076 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1017
>gb|AY128784.1| Arabidopsis thaliana putative fructose bisphosphate aldolase (At2g21330) mRNA, complete cds Length = 1259 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1016 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 957
>gb|AY128380.1| Arabidopsis thaliana putative fructose bisphosphate aldolase (At2g21330) mRNA, complete cds Length = 1467 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1074 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1015
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 25640 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 25699
>gb|AY090291.1| Arabidopsis thaliana At2g21330/F3K23.9 mRNA, complete cds Length = 1200 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1016 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 957
>gb|AY062582.1| Arabidopsis thaliana putative fructose bisphosphate aldolase (At2g21330; F3K23.9) mRNA, complete cds Length = 1423 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1072 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1013
>gb|AF419589.1|AF419589 Arabidopsis thaliana At2g21330/F3K23.9 mRNA, complete cds Length = 1466 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1072 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1013
>gb|AF428408.1|AF428408 Arabidopsis thaliana At2g21330/F3K23.9 mRNA, complete cds Length = 1362 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1072 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1013
>gb|AY049282.1| Arabidopsis thaliana At2g21330/F3K23.9 mRNA, complete cds Length = 1366 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1072 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1013
>gb|AY049286.1| Arabidopsis thaliana At2g21330/F3K23.9 mRNA, complete cds Length = 1411 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1072 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1013
>gb|BT002415.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1450 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1072 gcgtaggagaaggacacgtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1013
>gb|AY106811.1| Zea mays PCO109530 mRNA sequence Length = 1545 Score = 87.7 bits (44), Expect = 4e-14 Identities = 140/172 (81%) Strand = Plus / Minus Query: 381 ccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgcg 440 |||||||| ||||| ||||||||||| ||||||| |||||| |||| |||||||||| | Sbjct: 1174 ccgagctgggccagcgagttggcctttgcgcgcaccagcagggccttctgcgctgcctcc 1115 Query: 441 acgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtag 500 |||||||| || ||||| ||| ||||| || | ||||||||| |||| || ||| Sbjct: 1114 acgttctcagggcgcccttgccatgtcttcagcaccgagttctgcagagcccgggcatag 1055 Query: 501 gagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||| ||||| |||||| | | ||||||||| || |||||||||| Sbjct: 1054 gagaacgacacatgccatgggttcagagactggttcattgcattcaggttca 1003
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 459 ccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgccac 518 ||||| ||||| | ||| |||||||||| ||| | ||||||||||||||||||||||| Sbjct: 25354 ccccatgtcttcaagcaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgccat 25413 Query: 519 gggttcggcgcctggttcatcgcgttcaggttcaa 553 |||||||| | |||||||| |||||||||||||| Sbjct: 25414 gggttcggtccttggttcattgcgttcaggttcaa 25448
>ref|NM_184115.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1421 Score = 79.8 bits (40), Expect = 9e-12 Identities = 139/172 (80%) Strand = Plus / Minus Query: 381 ccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgcg 440 |||||||| ||||| ||||| |||||||| || | |||||| |||| |||||||||| | Sbjct: 1162 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcctcc 1103 Query: 441 acgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtag 500 |||||||| || ||||| ||| ||||| || | |||||| || |||| ||||| Sbjct: 1102 acgttctcggggcgcccctgccatgtcttcagcaccgagttctggagagcccgggcgtat 1043 Query: 501 gagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||||||||| ||||| ||||| || | |||||||||||||||||||||| Sbjct: 1042 gagaaggacacatgccatgggtttggttcttggttcatcgcgttcaggttca 991
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 9e-12 Identities = 139/172 (80%) Strand = Plus / Minus Query: 381 ccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgcg 440 |||||||| ||||| ||||| |||||||| || | |||||| |||| |||||||||| | Sbjct: 1018176 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcctcc 1018117 Query: 441 acgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtag 500 |||||||| || ||||| ||| ||||| || | |||||| || |||| ||||| Sbjct: 1018116 acgttctcggggcgcccctgccatgtcttcagcaccgagttctggagagcccgggcgtat 1018057 Query: 501 gagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||||||||| ||||| ||||| || | |||||||||||||||||||||| Sbjct: 1018056 gagaaggacacatgccatgggtttggttcttggttcatcgcgttcaggttca 1018005
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 79.8 bits (40), Expect = 9e-12 Identities = 139/172 (80%) Strand = Plus / Minus Query: 381 ccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgcg 440 |||||||| ||||| ||||| |||||||| || | |||||| |||| |||||||||| | Sbjct: 55844 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcctcc 55785 Query: 441 acgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtag 500 |||||||| || ||||| ||| ||||| || | |||||| || |||| ||||| Sbjct: 55784 acgttctcggggcgcccctgccatgtcttcagcaccgagttctggagagcccgggcgtat 55725 Query: 501 gagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||||||||| ||||| ||||| || | |||||||||||||||||||||| Sbjct: 55724 gagaaggacacatgccatgggtttggttcttggttcatcgcgttcaggttca 55673
>dbj|AK099387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075H15, full insert sequence Length = 1477 Score = 79.8 bits (40), Expect = 9e-12 Identities = 139/172 (80%) Strand = Plus / Minus Query: 381 ccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgcg 440 |||||||| ||||| ||||| |||||||| || | |||||| |||| |||||||||| | Sbjct: 1161 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcctcc 1102 Query: 441 acgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtag 500 |||||||| || ||||| ||| ||||| || | |||||| || |||| ||||| Sbjct: 1101 acgttctcggggcgcccctgccatgtcttcagcaccgagttctggagagcccgggcgtat 1042 Query: 501 gagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||||||||| ||||| ||||| || | |||||||||||||||||||||| Sbjct: 1041 gagaaggacacatgccatgggtttggttcttggttcatcgcgttcaggttca 990
>dbj|AK059097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C06, full insert sequence Length = 1421 Score = 79.8 bits (40), Expect = 9e-12 Identities = 139/172 (80%) Strand = Plus / Minus Query: 381 ccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgcgctgccgcg 440 |||||||| ||||| ||||| |||||||| || | |||||| |||| |||||||||| | Sbjct: 1162 ccgagctgagccagcgagttcgccttggcacggaccagcagtgccttctgcgctgcctcc 1103 Query: 441 acgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtag 500 |||||||| || ||||| ||| ||||| || | |||||| || |||| ||||| Sbjct: 1102 acgttctcggggcgcccctgccatgtcttcagcaccgagttctggagagcccgggcgtat 1043 Query: 501 gagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||||||||| ||||| ||||| || | |||||||||||||||||||||| Sbjct: 1042 gagaaggacacatgccatgggtttggttcttggttcatcgcgttcaggttca 991
>ref|NM_120057.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT4G38970 transcript variant AT4G38970.1 mRNA, complete cds Length = 1496 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 1133 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 1074 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 1073 catgggtttggtgcctggttcattgcgttca 1043
>ref|NM_202981.1| Arabidopsis thaliana fructose-bisphosphate aldolase AT4G38970 transcript variant AT4G38970.2 mRNA, complete cds Length = 1500 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 1137 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 1078 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 1077 catgggtttggtgcctggttcattgcgttca 1047
>gb|BT015870.1| Arabidopsis thaliana At4g38970 mRNA, complete cds Length = 1197 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 1052 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 993 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 992 catgggtttggtgcctggttcattgcgttca 962
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 78014 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 78073 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 78074 catgggtttggtgcctggttcattgcgttca 78104
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 40004 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 40063 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 40064 catgggtttggtgcctggttcattgcgttca 40094
>gb|AF428455.1|AF428455 Arabidopsis thaliana AT4g38970/F19H22_70 mRNA, complete cds Length = 1419 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 1127 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 1068 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 1067 catgggtttggtgcctggttcattgcgttca 1037
>emb|BX826872.1|CNS0A43J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1313 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 1107 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 1048 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 1047 caagggtttggtgcctggttcattgcgttca 1017
>emb|BX828075.1|CNS0A3X4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1370 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| || || || || |||||||||| ||| | ||||||||||||||||||||| Sbjct: 1122 ccgccccatgttttcagacaagtgttctgcaacgcacgtgcgtaggagaaggacacgtgc 1063 Query: 516 cacgggttcggcgcctggttcatcgcgttca 546 || ||||| || ||||||||||| ||||||| Sbjct: 1062 catgggtttggtgcctggttcattgcgttca 1032
>gb|AF467803.1| Hevea brasiliensis latex plastidic aldolase-like protein mRNA, complete cds Length = 1552 Score = 73.8 bits (37), Expect = 5e-10 Identities = 145/181 (80%) Strand = Plus / Minus Query: 372 gtgtacttgccgagctgcgccagggagttggccttggcgcgcagcagcagcgcctcctgc 431 ||||||||||| ||||| || || ||||||||||||||||| | || || ||||||| Sbjct: 1260 gtgtacttgccaagctgagcaagtgagttggccttggcgcggacaagaagtacctcctga 1201 Query: 432 gctgccgcgacgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgcc 491 || ||| || ||||| || | || |||| ||||||||||| |||||||| || ||| Sbjct: 1200 gcagccttcacattctcaggtctgccagcccaggtcttgaggcaagtgttctggagagcc 1141 Query: 492 ctcgcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttc 551 || || || ||||||||||| ||||| ||||| || | |||||||| |||||||||||| Sbjct: 1140 cttgcatatgagaaggacacatgccatgggtttggaccttggttcatggcgttcaggttc 1081 Query: 552 a 552 | Sbjct: 1080 a 1080
>emb|Y10380.1|STPLASALD Solanum tuberosum partial mRNA for protein homologous to plastidic aldolase Length = 1260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 459 ccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgccac 518 ||||| ||||| | ||| |||||||| || ||||| ||||| ||||| |||||||||||| Sbjct: 928 ccccatgtcttcaagcaagtgttctgaagagcccttgcgtaagagaacgacacgtgccac 869 Query: 519 gggttcggcgcctggttcatcgcgttcaggttcaa 553 ||||| || || |||||||| || |||| |||||| Sbjct: 868 gggtttggagcttggttcatggcattcaagttcaa 834
>gb|DQ160148.1| Taraxacum officinale TO117-23 (To117-23) mRNA, partial cds Length = 356 Score = 63.9 bits (32), Expect = 5e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 441 acgttctccggccgcccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtag 500 ||||||||||||| || ||||| ||||| | ||| |||||||| || || | ||||| Sbjct: 243 acgttctccggccttcctccccatgtcttcaagcaagtgttctgaagagcacgtgcgtac 184 Query: 501 gagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||||||||| || |||||||||||||||| ||||| Sbjct: 183 gagaacgacacgtgccacgggttagggctttggttcatcgcgttcaagttca 132
>dbj|AB027002.1| Nicotiana paniculata mRNA for plastidic aldolase, complete cds Length = 1431 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 459 ccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgccac 518 ||||| ||||| | ||| |||||||| || ||||||||||| ||||| || |||||||| Sbjct: 1092 ccccatgtcttcaagcaagtgttctgaagagccctcgcgtatgagaacgatacgtgccat 1033 Query: 519 gggttcggcgcctggttcatcgcgttcaggttcaa 553 ||||| || || |||||||| || |||| |||||| Sbjct: 1032 gggtttggagcttggttcatggcattcaagttcaa 998
>emb|X69969.1|CRALDCHL C.reinhardtii mRNA for fructose-1,6-bisphosphate aldolase Length = 1737 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||| ||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 1014 gcgtacgagaacgacacgtgccacgggttggggctctggttcatggcgttcaggttca 957
>gb|S72951.1| Chlamydomonas reinhardtii fructosediphophate aldolase gene, complete cds; and unknown gene; nuclear genes for chloroplast products Length = 1717 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||| ||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 1013 gcgtacgagaacgacacgtgccacgggttggggctctggttcatggcgttcaggttca 956
>emb|X85495.1|CRALD C.reinhardtii ald gene Length = 3676 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||| ||||||||||||||||| || ||||||||| ||||||||||||| Sbjct: 2459 gcgtacgagaacgacacgtgccacgggttggggctctggttcatggcgttcaggttca 2402
>gb|AY112650.1| Zea mays CL13695_-2 mRNA sequence Length = 453 Score = 60.0 bits (30), Expect = 8e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||||||||| || ||| |||| |||||||| | |||||||||||| |||||||||| Sbjct: 372 gcgtaggagaatgatacgggccatgggttcggagactggttcatcgcattcaggttca 429
>ref|NM_001036310.1| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G21330 transcript variant AT2G21330.3 mRNA, complete cds Length = 1499 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 512 gtgccacgggttcggcgcctggttcatcgcgttcaggttcaag 554 |||||| |||||||| ||||||||||| ||||||| ||||||| Sbjct: 1059 gtgccatgggttcggtgcctggttcattgcgttcaagttcaag 1017
>gb|BT012696.1| Lycopersicon esculentum clone 113566F, mRNA sequence Length = 1359 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 465 gtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgccacgggtt 523 ||||||||||| |||||||| || || || ||||| ||||| ||||||||||| ||||| Sbjct: 1090 gtcttgaggcatgtgttctgaagggctctggcgtatgagaacgacacgtgccatgggtt 1032
>emb|X66814.1|SOALDCHL S.oleracea ALDCHL mRNA for fructose-1,6-bisphosphate aldolase Length = 1464 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 460 cccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgccacg 519 |||| ||||| | |||||||||||| || || || ||||||||||| || |||||||| | Sbjct: 1091 cccaggtcttcaagcaggtgttctggagggctcttgcgtaggagaaagatacgtgccatg 1032 Query: 520 ggttcggcgcctggttcatcgcgttcaggttcaag 554 |||| || ||||||||| || |||| ||||||| Sbjct: 1031 ggttagggctctggttcatggcattcaagttcaag 997
>ref|NM_126176.2| Arabidopsis thaliana fructose-bisphosphate aldolase AT2G01140 mRNA, complete cds Length = 1515 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||| ||||| ||||| || ||||||||| ||||||||||||| Sbjct: 1136 gcgtatgagaaggacacatgccatgggtttgggctctggttcatggcgttcaggttca 1079 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 1253 ttgccgagctgggccagtgagttggcctt 1225
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence Length = 94029 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||| ||||| ||||| || ||||||||| ||||||||||||| Sbjct: 4786 gcgtatgagaaggacacatgccatgggtttgggctctggttcatggcgttcaggttca 4843 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 4669 ttgccgagctgggccagtgagttggcctt 4697
>gb|AF325014.2|AF325014 Arabidopsis thaliana At2g01140 (At2g01140/F10A8.2) mRNA, complete cds Length = 1470 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||| ||||| ||||| || ||||||||| ||||||||||||| Sbjct: 1090 gcgtatgagaaggacacatgccatgggtttgggctctggttcatggcgttcaggttca 1033 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
>emb|BX820093.1|CNS0A9H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZH02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1377 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||| ||||| ||||| || ||||||||| ||||||||||||| Sbjct: 1067 gcgtatgagaaggacacatgccatgggtttgggctctggttcatggcgttcaggttca 1010 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 1195 ttgccgagctgggccagtgagttggcctt 1167
>emb|BX820040.1|CNS0A9FV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS67ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||| ||||| ||||| || ||||||||| ||||||||||||| Sbjct: 1070 gcgtatgagaaggacacatgccatgggtttgggctctggttcatggcgttcaggttca 1013 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 1187 ttgccgagctgggccagtgagttggcctt 1159
>emb|BX819648.1|CNS0A9G5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1421 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||| ||||| ||||| || ||||||||| ||||||||||||| Sbjct: 1064 gcgtatgagaaggacacatgccatgggtttgggctctggttcatggcgttcaggttca 1007
>gb|AY086203.1| Arabidopsis thaliana clone 22418 mRNA, complete sequence Length = 1469 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 495 gcgtaggagaaggacacgtgccacgggttcggcgcctggttcatcgcgttcaggttca 552 ||||| ||||||||||| ||||| ||||| || ||||||||| ||||||||||||| Sbjct: 1090 gcgtatgagaaggacacatgccatgggtttgggctctggttcatggcgttcaggttca 1033 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 1207 ttgccgagctgggccagtgagttggcctt 1179
>dbj|AB027001.1| Nicotiana paniculata mRNA for plastidic aldolase NPALDP1, complete cds Length = 1384 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 456 ccgccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgc 515 |||||||| ||||||||||| |||||||| || || || ||||| ||||| ||||| ||| Sbjct: 1081 ccgccccatgtcttgaggcatgtgttctgaagggctctggcgtatgagaacgacacatgc 1022 Query: 516 ca 517 || Sbjct: 1021 ca 1020
>gb|BT012701.1| Lycopersicon esculentum clone 113575F, mRNA sequence Length = 1419 Score = 48.1 bits (24), Expect = 0.031 Identities = 72/88 (81%) Strand = Plus / Minus Query: 459 ccccacgtcttgaggcaggtgttctgcagcgccctcgcgtaggagaaggacacgtgccac 518 ||||| |||||||| || |||||||| || || || || || ||||| || |||||||| Sbjct: 1075 ccccatgtcttgagacatgtgttctgaagggctcttgcatatgagaacgatacgtgccat 1016 Query: 519 gggttcggcgcctggttcatcgcgttca 546 ||||| || | |||||||||||||||| Sbjct: 1015 gggttgggagattggttcatcgcgttca 988
>gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complete sequence Length = 165247 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 ttcatatacttacttacttaggg 51 ||||||||||||||||||||||| Sbjct: 43256 ttcatatacttacttacttaggg 43278
>gb|AF537127.1| Camellia sinensis beta-1,3-glucosidase-like mRNA, partial sequence Length = 584 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 371 ggtgtacttgccgagctgcgccagggagttggccttggc 409 ||||||||||||||| || ||||| |||||||| ||||| Sbjct: 305 ggtgtacttgccgagttgagccagagagttggcgttggc 267
>ref|XM_482693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 405 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 192 ctccggccgcccgccccacgtc 171
>ref|NM_196900.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0071K18.21), mRNA Length = 984 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 774 ctccggccgcccgccccacgtc 753
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 408 gcgcgcagcagcagcgcctcctgcgc 433 ||||||||||||||||| |||||||| Sbjct: 631404 gcgcgcagcagcagcgcatcctgcgc 631429
>gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0010H19, complete sequence Length = 162902 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 49881 ctccggccgcccgccccacgtc 49902
>gb|AC084767.11| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0057P11 map R606A, complete sequence Length = 163580 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 147737 ctccggccgcccgccccacgtc 147758
>gb|AC137003.3| Oryza sativa (japonica cultivar-group) Chromosome 5 BAC clone OSJNBb0069G11, complete sequence Length = 174844 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 96944 ctccggccgcccgccccacgtc 96923
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 19984276 ctccggccgcccgccccacgtc 19984255 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacg 465 |||||||||||||||||||| Sbjct: 21061264 ctccggccgcccgccccacg 21061283
>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0039F06, complete sequence Length = 133022 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 27328 ctccggccgcccgccccacgtc 27307
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 74044 ctccggccgcccgccccacgtc 74065 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 66774 ctccggccgcccgccccacgtc 66795
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 ccttggcgcgcagcagcagcgc 424 |||||||||||||||||||||| Sbjct: 309021 ccttggcgcgcagcagcagcgc 309000 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 gcgcgcagcagcagcgcctcctgc 431 ||||||||||||||||| |||||| Sbjct: 222907 gcgcgcagcagcagcgcttcctgc 222884
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 ccttggcgcgcagcagcagcgc 424 |||||||||||||||||||||| Sbjct: 101392 ccttggcgcgcagcagcagcgc 101371
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 ccttggcgcgcagcagcagcgc 424 |||||||||||||||||||||| Sbjct: 281832 ccttggcgcgcagcagcagcgc 281853
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 16593468 ctccggccgcccgccccacgtc 16593447 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 16586198 ctccggccgcccgccccacgtc 16586177
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 21950504 ctccggccgcccgccccacgtc 21950525 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 13870557 ctccggccgcccgccccacgtc 13870578 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 10996684 ctccggccgcccgccccacgtc 10996663 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgt 466 ||||||||||||||||||||| Sbjct: 24057665 ctccggccgcccgccccacgt 24057685
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 12070445 ctccggccgcccgccccacgtc 12070466 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 tacttacttacttagggtggcaaacaaag 63 ||||||||||||||||| |||||||||| Sbjct: 17686289 tacttacttacttagggatgcaaacaaag 17686261
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 6536709 ctccggccgcccgccccacgtc 6536730
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 10480128 ctccggccgcccgccccacgtc 10480107 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 10366848 ctccggccgcccgccccacgtc 10366869
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 19977304 ctccggccgcccgccccacgtc 19977283 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacg 465 |||||||||||||||||||| Sbjct: 21054293 ctccggccgcccgccccacg 21054312
>gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genomic sequence, complete sequence Length = 137297 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 136565 ctccggccgcccgccccacgtc 136544
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 53085 ctccggccgcccgccccacgtc 53106
>dbj|AP006626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1042B08 Length = 142032 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 79293 ctccggccgcccgccccacgtc 79314
>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0465H09 Length = 148590 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 78276 ctccggccgcccgccccacgtc 78297
>dbj|AP003936.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_E05 Length = 137352 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 90411 ctccggccgcccgccccacgtc 90390
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_D12 Length = 105521 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 14952 ctccggccgcccgccccacgtc 14973
>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_H01 Length = 128124 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 36253 ctccggccgcccgccccacgtc 36274
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 16601709 ctccggccgcccgccccacgtc 16601688 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacgtc 467 |||||||||||||||||||||| Sbjct: 16594439 ctccggccgcccgccccacgtc 16594418
>ref|XM_548078.2| PREDICTED: Canis familiaris similar to RUN domain containing 1 (LOC490955), mRNA Length = 2110 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 409 cgcgcagcagcagcgcctcctgcgc 433 |||| |||||||||||||||||||| Sbjct: 348 cgcggagcagcagcgcctcctgcgc 372
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 409 cgcgcagcagcagcgcctcctgcgc 433 ||||||||||||||||| ||||||| Sbjct: 5068387 cgcgcagcagcagcgccgcctgcgc 5068411
>emb|BX821886.1|CNS0A9AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 329 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 88 ttgccgagctgggccagtgagttggcctt 60
>emb|BX819026.1|CNS0A82R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 262 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 ttgccgagctgcgccagggagttggcctt 406 ||||||||||| ||||| ||||||||||| Sbjct: 37 ttgccgagctgggccagtgagttggcctt 9
>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0481F05 Length = 139739 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgt 466 ||||||||||||||||||||| Sbjct: 85065 ctccggccgcccgccccacgt 85085
>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_F08 Length = 134988 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 35 tacttacttacttagggtggcaaacaaag 63 ||||||||||||||||| |||||||||| Sbjct: 90322 tacttacttacttagggatgcaaacaaag 90294
>emb|AL672020.5| Mouse DNA sequence from clone RP23-185A3 on chromosome X, complete sequence Length = 200613 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ttgttcatatacttacttact 46 ||||||||||||||||||||| Sbjct: 61739 ttgttcatatacttacttact 61759
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacgt 466 ||||||||||||||||||||| Sbjct: 11151 ctccggccgcccgccccacgt 11171
>gb|AC012647.18| Trypanosoma brucei chromosome 2 clone RPCI93-27H14, complete sequence Length = 118437 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 acatgttctctttggcagct 353 |||||||||||||||||||| Sbjct: 27603 acatgttctctttggcagct 27584
>gb|AF158180.1| Homo sapiens methyl CpG binding protein 2 (MECP2) mRNA, complete cds Length = 10182 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1226 gcgcagcagcagcgcctcct 1245
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 acatgttctctttggcagct 353 |||||||||||||||||||| Sbjct: 323939 acatgttctctttggcagct 323958
>gb|AC011070.8| Drosophila melanogaster clone BACR02B12, complete sequence Length = 168850 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aacaaaggcaacaacaacgc 76 |||||||||||||||||||| Sbjct: 155801 aacaaaggcaacaacaacgc 155820
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcaaacaaaggcaacaaca 72 |||||||||||||||||||| Sbjct: 2560 ggcaaacaaaggcaacaaca 2541
>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence Length = 199043 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcaaacaaaggcaacaaca 72 |||||||||||||||||||| Sbjct: 155393 ggcaaacaaaggcaacaaca 155374
>ref|XM_587886.2| PREDICTED: Bos taurus similar to RUN domain containing 1, transcript variant 1 (LOC539525), mRNA Length = 1842 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 agcagcagcgcctcctgcgc 433 |||||||||||||||||||| Sbjct: 353 agcagcagcgcctcctgcgc 372
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ctccggccgcccgccccacg 465 |||||||||||||||||||| Sbjct: 24014 ctccggccgcccgccccacg 23995
>ref|NM_004992.2| Homo sapiens methyl CpG binding protein 2 (Rett syndrome) (MECP2), mRNA Length = 10182 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1226 gcgcagcagcagcgcctcct 1245
>ref|XM_869403.1| PREDICTED: Bos taurus similar to dead end homolog 1 (LOC525516), mRNA Length = 1068 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gcagcagcagcgcctcctgc 431 |||||||||||||||||||| Sbjct: 514 gcagcagcagcgcctcctgc 495
>gb|AY541280.1| Homo sapiens methyl CpG binding protein 2 isoform B (MECP2) mRNA, complete cds Length = 1504 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1102 gcgcagcagcagcgcctcct 1121
>ref|XM_848395.1| PREDICTED: Canis familiaris similar to Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2), transcript variant 1 (LOC612973), mRNA Length = 1793 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1264 gcgcagcagcagcgcctcct 1283
>gb|AF030876.2| Homo sapiens chromosome X clone Qc-8D3, RP4-671D9, I104-219D, L110-C1837 map q28, complete sequence Length = 112752 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 22241 gcgcagcagcagcgcctcct 22222
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 408 gcgcgcagcagcagcgcctcctgc 431 ||||||||||||||||| |||||| Sbjct: 315571 gcgcgcagcagcagcgcttcctgc 315548
>emb|BX538060.1|HSM806231 Homo sapiens mRNA; cDNA DKFZp686A24160 (from clone DKFZp686A24160) Length = 1763 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1151 gcgcagcagcagcgcctcct 1170
>gb|AF329673.2| Dunaliella salina fructose-bisphosphate aldolase isoenzyme 1 mRNA, complete cds Length = 1445 Score = 40.1 bits (20), Expect = 7.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 476 ggtgttctgcagcgccctcgcgtaggagaaggacacgtgccacgggtt 523 |||||||||||| || | ||||| ||||| ||||||||||| ||||| Sbjct: 982 ggtgttctgcagggcacgggcgtaagagaaagacacgtgccaggggtt 935
>emb|CR559941.5| Zebrafish DNA sequence from clone DKEY-161O1 in linkage group 13, complete sequence Length = 89710 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gcagtaaaaccattccaaag 127 |||||||||||||||||||| Sbjct: 12372 gcagtaaaaccattccaaag 12353
>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete sequence Length = 207834 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 179458 gcgcagcagcagcgcctcct 179439
>ref|NM_173273.1| Danio rerio digestive-organ expansion factor (def), mRNA Length = 2445 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gcagtaaaaccattccaaag 127 |||||||||||||||||||| Sbjct: 1694 gcagtaaaaccattccaaag 1713
>gb|AF506211.1| Danio rerio DJ434O14.5-like protein mRNA, complete cds Length = 2445 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gcagtaaaaccattccaaag 127 |||||||||||||||||||| Sbjct: 1694 gcagtaaaaccattccaaag 1713
>emb|CR604541.1| full-length cDNA clone CS0DC024YJ12 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1524 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1033 gcgcagcagcagcgcctcct 1052
>emb|CR598471.1| full-length cDNA clone CS0DC015YE07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1536 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1036 gcgcagcagcagcgcctcct 1055
>gb|AY029175.1| Cavia porcellus F-box protein OCP1 (OCP1) mRNA, complete cds Length = 1180 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cgcgcagcagcagcgcctcc 428 |||||||||||||||||||| Sbjct: 248 cgcgcagcagcagcgcctcc 229
>gb|AF295597.1|AF295597 Macaca fascicularis methyl-CpG-binding protein 2 (MECP2) mRNA, complete cds Length = 1461 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1059 gcgcagcagcagcgcctcct 1078
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete sequence Length = 131250 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ctccggccgcccgccccacg 465 |||||||||||||||||||| Sbjct: 39020 ctccggccgcccgccccacg 39039
>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone BACR36D15, complete sequence Length = 159513 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aacaaaggcaacaacaacgc 76 |||||||||||||||||||| Sbjct: 129529 aacaaaggcaacaacaacgc 129510
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tgccctcaagctgctcaagg 251 |||||||||||||||||||| Sbjct: 2164719 tgccctcaagctgctcaagg 2164738
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 415 gcagcagcgcctcctgcgctgccgcgac 442 ||||||||||| ||||||| |||||||| Sbjct: 5541341 gcagcagcgccgcctgcgccgccgcgac 5541368
>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete sequences Length = 160456 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 cgtcttgaggcaggtgttct 483 |||||||||||||||||||| Sbjct: 58006 cgtcttgaggcaggtgttct 58025
>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete sequences Length = 174520 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 cgtcttgaggcaggtgttct 483 |||||||||||||||||||| Sbjct: 149721 cgtcttgaggcaggtgttct 149740
>dbj|BS000235.1| Pan troglodytes chromosome 22 clone:PTB-013J17, map 22, complete sequences Length = 100580 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 cgtcttgaggcaggtgttct 483 |||||||||||||||||||| Sbjct: 100416 cgtcttgaggcaggtgttct 100435
>emb|AJ132917.1|HSA132917 Homo sapiens mRNA for methyl-CpG-binding protein 2 Length = 10091 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1134 gcgcagcagcagcgcctcct 1153
>gb|BC058062.1| Danio rerio digestive-organ expansion factor, mRNA (cDNA clone MGC:63753 IMAGE:2640310), complete cds Length = 2466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 gcagtaaaaccattccaaag 127 |||||||||||||||||||| Sbjct: 1673 gcagtaaaaccattccaaag 1692
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ggcaaacaaaggcaacaaca 72 |||||||||||||||||||| Sbjct: 175887 ggcaaacaaaggcaacaaca 175868
>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete sequence Length = 300896 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aacaaaggcaacaacaacgc 76 |||||||||||||||||||| Sbjct: 87427 aacaaaggcaacaacaacgc 87408
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 cgtcttgaggcaggtgttct 483 |||||||||||||||||||| Sbjct: 121878 cgtcttgaggcaggtgttct 121897
>gb|L37298.1|HUMMECP Homo sapiens methyl-CpG-binding protein (MeCP-2) mRNA, complete cds Length = 1669 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1140 gcgcagcagcagcgcctcct 1159
>gb|BC011612.1| Homo sapiens methyl CpG binding protein 2 (Rett syndrome), mRNA (cDNA clone MGC:10245 IMAGE:3956518), complete cds Length = 1716 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1143 gcgcagcagcagcgcctcct 1162
>emb|X89430.1|HSRNACPGB H.sapiens mRNA for methyl CpG binding protein 2 Length = 2351 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1030 gcgcagcagcagcgcctcct 1049
>emb|X94628.1|HSMECP2 H.sapiens MeCP-2 gene Length = 2718 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 730 gcgcagcagcagcgcctcct 711
>emb|X99686.1|HSMECP2X H.sapiens mRNA for methyl-CpG-binding protein 2 Length = 1533 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1133 gcgcagcagcagcgcctcct 1152
>emb|Y12643.1|HSMECPG2 H.sapiens mRNA for methyl-CpG-binding protein 2 Length = 1652 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gcgcagcagcagcgcctcct 429 |||||||||||||||||||| Sbjct: 1123 gcgcagcagcagcgcctcct 1142
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171 region, complete sequence Length = 158063 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 cgtcttgaggcaggtgttct 483 |||||||||||||||||||| Sbjct: 121878 cgtcttgaggcaggtgttct 121897 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,147,853 Number of Sequences: 3902068 Number of extensions: 4147853 Number of successful extensions: 96435 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95460 Number of HSP's gapped (non-prelim): 966 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
