Clone Name | rbah62d01 |
---|---|
Clone Library Name | barley_pub |
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 102 bits (253), Expect = 3e-22 Identities = 49/50 (98%), Positives = 49/50 (98%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 209 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF Sbjct: 238 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 287
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 100 bits (249), Expect = 9e-22 Identities = 48/50 (96%), Positives = 48/50 (96%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 209 LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTI DTF Sbjct: 235 LQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 284
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 59.3 bits (142), Expect = 2e-09 Identities = 28/46 (60%), Positives = 31/46 (67%) Frame = -3 Query: 346 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 209 E+ + RLAM+AFLGF VQ TGKGP N HLSDP H TI TF Sbjct: 205 ELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 54.7 bits (130), Expect = 5e-08 Identities = 28/37 (75%), Positives = 33/37 (89%) Frame = -3 Query: 361 TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT 251 TL+LAEIKH+RLAMVAFL FA+QAA TGKGP++ AT Sbjct: 237 TLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 54.3 bits (129), Expect = 7e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A HLSDP++ Sbjct: 212 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 54.3 bits (129), Expect = 7e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 210 LEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 54.3 bits (129), Expect = 7e-08 Identities = 25/48 (52%), Positives = 34/48 (70%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFD 215 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ ++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWN 258
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 68 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 110
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 60 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 102
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVN 252
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 53.9 bits (128), Expect = 9e-08 Identities = 25/43 (58%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 205 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 247
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 53.5 bits (127), Expect = 1e-07 Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIFD 215 L++ EIK+ RLA++A +GF VQ +A G GPL N ATHL+DP H I D Sbjct: 188 LKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGD 236
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/41 (60%), Positives = 31/41 (75%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 236 L++ EIK+ RLAM A LGF +QA TG+GP+ N A HLSDP Sbjct: 221 LKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDP 261
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 200 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 242
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVN 250
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 208 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 150 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 192
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 218 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 260
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 222 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 199 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 241
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A H++DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A H++DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 53.1 bits (126), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 213 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 255
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 52.8 bits (125), Expect = 2e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL+N HL+DP++ Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVN 253
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K RLAM++ GF VQA TGKGPL N A H++DP++ Sbjct: 209 LKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVN 251
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A H++DP++ Sbjct: 206 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 248
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/47 (53%), Positives = 31/47 (65%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIF 218 L++ EIK+ RLAM A LGF VQA TGKGP+ N HL++P F Sbjct: 218 LKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAF 264
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 211 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 211 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 253
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL N A HL++P++ Sbjct: 189 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVN 231
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/42 (54%), Positives = 31/42 (73%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N A H++DP+ Sbjct: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPV 249
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/41 (56%), Positives = 28/41 (68%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 236 L++ EIK+ RLAM LGF QA TG+GP+ NW HL DP Sbjct: 66 LKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDP 106
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 +++ E+K+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 209 VKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 +++ EIK+ RLAM + GF VQA TGKGP+ N A HL+DP++ Sbjct: 222 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 264
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 52.0 bits (123), Expect = 4e-07 Identities = 24/43 (55%), Positives = 31/43 (72%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ IK+ RLAM + GF VQA TGKGPL N A HL+DP++ Sbjct: 211 LKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 253
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/41 (58%), Positives = 30/41 (73%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 236 L++ EIK+ RLAM + GF VQA TGKGP+ N A HL+DP Sbjct: 200 LKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADP 240
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 51.6 bits (122), Expect = 5e-07 Identities = 23/46 (50%), Positives = 32/46 (69%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI 221 L+L EIK+ RLAM+A LG+ +QA TG GP N HL+DP++ + Sbjct: 221 LKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNV 266
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 51.2 bits (121), Expect = 6e-07 Identities = 24/41 (58%), Positives = 30/41 (73%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 236 L++ EIK+ RLAM + LGF VQA TGKGP+ N HL+DP Sbjct: 197 LKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADP 237
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ EIK+ RLAM + GF VQA TGKGPL + A H++DP++ Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVN 252
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 51.2 bits (121), Expect = 6e-07 Identities = 24/42 (57%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGPL N HL+DP+ Sbjct: 212 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPV 253
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 50.8 bits (120), Expect = 8e-07 Identities = 22/42 (52%), Positives = 31/42 (73%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N + H++DP+ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPV 250
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 50.8 bits (120), Expect = 8e-07 Identities = 24/42 (57%), Positives = 29/42 (69%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGPL N HL DP+ Sbjct: 212 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPV 253
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 50.8 bits (120), Expect = 8e-07 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF V A TGKGPL N A HL+DP++ Sbjct: 172 LKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVN 214
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 50.8 bits (120), Expect = 8e-07 Identities = 22/42 (52%), Positives = 31/42 (73%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N + H++DP+ Sbjct: 181 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPV 222
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/41 (53%), Positives = 30/41 (73%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDP 236 L++ E+K+ RLAM + GF VQA TGKGP+ N + HL+DP Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADP 249
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N HL+DP+ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 250
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/50 (50%), Positives = 32/50 (64%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 209 L+ EIK+ RLAM+A +G Q TG GP++N HL+DP H TIF F Sbjct: 218 LRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/50 (50%), Positives = 32/50 (64%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTF 209 L+ EIK+ RLAM+A +G Q TG GP++N HL+DP H TIF F Sbjct: 218 LRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAF 267
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N HL+DP+ Sbjct: 210 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 251
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/43 (53%), Positives = 30/43 (69%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E K+ RLAM + GF +QA TGKGPL N A HL DP++ Sbjct: 211 LKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVN 253
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/43 (53%), Positives = 31/43 (72%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 230 L++ E+K+ RLAM + GF VQA TGKGPL N A HL+ P++ Sbjct: 207 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVN 249
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/42 (54%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N HL+DP+ Sbjct: 94 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPV 135
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPV 250
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 250
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 49.3 bits (116), Expect = 2e-06 Identities = 23/42 (54%), Positives = 29/42 (69%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ EIK+ RLAM + GF VQA TGKGPL N HL +P+ Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPV 250
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ E+K+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 209 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPV 250
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 48.5 bits (114), Expect = 4e-06 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 233 L++ E+K+ RLAM + GF VQA TGKGP+ N H++DP+ Sbjct: 207 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 248
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/46 (52%), Positives = 27/46 (58%) Frame = -3 Query: 349 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDT 212 AEIK+ RLA+ A LGF VQ G PL N A HL PL I D+ Sbjct: 125 AEIKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRNIADS 170 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/43 (44%), Positives = 27/43 (62%) Frame = -3 Query: 349 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI 221 AE+K+ RLA+ A G Q ATG+ PL N + HL++P+ I Sbjct: 313 AEVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGANI 355 Score = 37.0 bits (84), Expect = 0.012 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = -3 Query: 349 AEIKHARLAMVAFLGFAVQAAATGKGPLNN 260 AEIK+ RLAM G VQ+ TGK P+NN Sbjct: 498 AEIKNGRLAMNGMFGLEVQSHVTGKSPINN 527
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 46.6 bits (109), Expect = 1e-05 Identities = 22/35 (62%), Positives = 28/35 (80%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 254 L+ AEIKHARLAMV+F G+ VQA +TG+G L + A Sbjct: 233 LKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLA 267
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/47 (46%), Positives = 29/47 (61%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIF 218 L++ EIK+ RLA + GF VQA TGKGP+ N HL++P F Sbjct: 197 LKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAF 243
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = -3 Query: 346 EIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDT 212 EIK+ RLAM LG Q ATG+ PL N A H ++P+ I T Sbjct: 285 EIKNGRLAMTGLLGLTFQYLATGESPLANLAAHFANPVGANITTT 329 Score = 40.4 bits (93), Expect = 0.001 Identities = 20/43 (46%), Positives = 24/43 (55%) Frame = -3 Query: 349 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI 221 AEIK+ RLAM+ G VQ T +GP+ N HL PL I Sbjct: 96 AEIKNGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPLAANI 138
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 36.2 bits (82), Expect = 0.020 Identities = 18/38 (47%), Positives = 24/38 (63%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHL 245 L++ E+K+ RLAM + GF VQA + K L N A HL Sbjct: 212 LKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHL 249
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 34.7 bits (78), Expect = 0.059 Identities = 20/31 (64%), Positives = 23/31 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPL 266 L+LAEIKHARLAM+A L F + A GK PL Sbjct: 227 LKLAEIKHARLAMLAMLIFYFE-AGQGKTPL 256
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPL 266 L+LAEIKH+RLAM+A L F + A GK PL Sbjct: 222 LKLAEIKHSRLAMLAMLIFYFE-AGQGKTPL 251
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPL 266 L++AEIKHARLAM+A L F + A GK PL Sbjct: 222 LKVAEIKHARLAMLAMLIFYFE-AGQGKTPL 251
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 33.1 bits (74), Expect = 0.17 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSD 239 +Q E+ H RLAM+A GF Q A +G + W T+ D Sbjct: 170 MQEKELSHGRLAMIAAAGFLAQEAVSG----DTWGTYWGD 205 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQ 293 L+ AE H R+AM+A LGF VQ Sbjct: 63 LREAETTHGRVAMLASLGFVVQ 84
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAPL 199 T PPT+ T PP++TPS P+ Sbjct: 1483 TPSPPTTTTTTPPPTTTPSPPM 1504 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAPL 199 T PPT+ T PP++TPS P+ Sbjct: 1421 TPSPPTTTTTTPPPTTTPSPPI 1442 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAP 202 T PPT+ T PP++TPS P Sbjct: 1601 TPSPPTTTTTTPPPTTTPSPP 1621 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAP 202 T PPT+ T PP++TPS P Sbjct: 1522 TPSPPTTTTTTPPPTTTPSPP 1542 Score = 28.5 bits (62), Expect = 4.2 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAPL 199 T PP + T PP++TPS+P+ Sbjct: 1664 TPSPPITTTTTPPPTTTPSSPI 1685 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAP 202 T PPT T PP++TPS P Sbjct: 1585 TPSPPTITTTTPPPTTTPSPP 1605 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAP 202 T PP S T PP++TPS P Sbjct: 1453 TPSPPISTTTTPPPTTTPSPP 1473
>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor| Length = 328 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = -1 Query: 264 TTGPPTSATRCTPPSST----PSAPLKWSVVEQFLSAQLQNGRTRVRVT 130 TT P + TRC PP++T P+ P + + + +A+ RT VR T Sbjct: 50 TTCRPPTTTRCPPPTTTRCPPPTRPAECTATTKRPTARPTTRRTTVRAT 98
>FCPA_MACPY (Q40297) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 217 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 254 L+ E+KH R+AM+A G Q A G L+N A Sbjct: 71 LRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSA 105
>FCPD_MACPY (Q40298) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor (Fragment) Length = 182 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 254 L+ E+KH R+AM+A G Q A G L+N A Sbjct: 36 LRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSA 70
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAA 287 L+ EIKH R++M+A +G+ VQ A Sbjct: 63 LRYVEIKHGRISMLAVVGYLVQEA 86
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAA 287 L+ EIKH R++M+A +G+ VQ A Sbjct: 63 LRYVEIKHGRISMLAVVGYLVQEA 86
>LCAT_CHICK (P53760) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) (Fragment) Length = 413 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -1 Query: 255 PPTSATRCTPPSSTPSAPLKWSVVEQFLSAQLQNGRTRVRVTNVLWFC 112 PPT+ P +STP W +V FL QL+ + V N W C Sbjct: 31 PPTTTPEAPPTNSTP----PWCLVPGFLGNQLEAKLDKPDVVN--WMC 72
>FCPF_MACPY (Q40300) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor (Fragment) Length = 211 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 254 L+ E+KH R+AM+A G Q G L+N A Sbjct: 65 LRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSA 99
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGP 269 L EIKH R+AM+A +G+ Q TGK P Sbjct: 32 LAQTEIKHGRVAMLATMGYITQ-EITGKLP 60
>HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 512 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 349 AEIKHARLAMVAFLGFAVQAAATGKGPLNNW 257 AE + R AM+A L V TGKG L+ W Sbjct: 476 AETWNGRAAMLAVLALLVLEVTTGKGFLHQW 506
>FCPB_MACPY (Q40296) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 217 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 254 L+ E+KH R+AM+A G Q G L+N A Sbjct: 71 LRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSA 105
>TSN32_HUMAN (Q96QS1) Tetraspanin-32 (Protein Phemx)| Length = 320 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 231 CSGSLRWVAQLLSGPLPVAAACTA 302 CSGSLRW+ + + PLP++ A Sbjct: 275 CSGSLRWLQESDAAPLPLSCHLAA 298
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQAAA 284 LQ E+ + RLAM+A GF +Q A Sbjct: 201 LQTKELNNGRLAMIAIAGFVLQEVA 225
>MURE_WOLSU (Q7M8F9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 434 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = +3 Query: 12 FTNHQVPAALLCDRTSIIIN-KGSLRYPLIHHSSYKTKARSLHG 140 F + P + D + N + +L Y + H SSY KA SLHG Sbjct: 181 FFDDSTPKLINKDESKAKFNLQNALSYGIEHPSSYHVKAYSLHG 224
>IF3A_YEAST (P38249) Eukaryotic translation initiation factor 3 110 kDa subunit| (eIF3 p110) (Translation initiation factor eIF3, p110 subunit) (eIF3a) Length = 964 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = -1 Query: 261 TGPPTSATRCTPPSSTPSA-PLKWSVVEQFLSAQLQNG 151 + P T AT TP + TPS+ P K ++ E+ + +L G Sbjct: 925 SSPATPATPATPATPTPSSGPKKMTMAEKLRAKRLAKG 962
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQ 293 L+ E+KH R++M+A +G+ VQ Sbjct: 63 LRYVELKHGRISMLAVVGYLVQ 84
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -3 Query: 358 LQLAEIKHARLAMVAFLGFAVQ 293 L+ EIKH R++M+A G+ VQ Sbjct: 63 LRYVEIKHGRISMLAVAGYLVQ 84
>NIFH_CLOCB (Q59270) Nitrogenase iron protein (EC 1.18.6.1) (Nitrogenase| component II) (Nitrogenase Fe protein) (Nitrogenase reductase) Length = 271 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +3 Query: 21 HQVPAALLCDRTSIIINKGSLRYPLIHHSSYKTKARSLHG 140 H VPA + C R I + S P+ Y+T AR + G Sbjct: 206 HFVPATMRCRRRKSIKRQLSTFRPMTQADEYRTLARKIDG 245
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -1 Query: 264 TTGPPTSATRCTPPSSTPSAPLKWSVVEQFLSAQLQNGRTRVRVTNVLWFCMTSDG 97 TT P TS T + SSTPS+ SV S Q + T +SDG Sbjct: 493 TTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTTSSDG 548 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,156,908 Number of Sequences: 219361 Number of extensions: 635953 Number of successful extensions: 2302 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 2189 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2296 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)